RNA–Protein interactions for RNA: ENST00000333896.5

SPTBN1-201, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best) BASIC

Gene SPTBN1, Length 9,075 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-201ENST00000333896 SERPINC1P01008 464 aa12.13□□□□□ -0.47
SPTBN1-201ENST00000333896 CCDC175P0C221 793 aa12.13□□□□□ -0.47
SPTBN1-201ENST00000333896 PSMA5P28066 241 aa12.13□□□□□ -0.47
SPTBN1-201ENST00000333896 PRPF40AO75400 957 aaKnown RBP12.13□□□□□ -0.47
SPTBN1-201ENST00000333896 TUBBP07437 444 aa12.13□□□□□ -0.47
SPTBN1-201ENST00000333896 CCDC113Q9H0I3 377 aa12.13□□□□□ -0.47
SPTBN1-201ENST00000333896 SPECC1LQ69YQ0 1117 aa12.13□□□□□ -0.47
SPTBN1-201ENST00000333896 LRCH2Q5VUJ6 765 aa12.13□□□□□ -0.47
SPTBN1-201ENST00000333896 XBP1P17861 261 aa12.13□□□□□ -0.47
SPTBN1-201ENST00000333896 HDGFP51858 240 aaKnown RBP12.13□□□□□ -0.47
SPTBN1-201ENST00000333896 SRRTQ9BXP5 876 aaKnown RBP12.13□□□□□ -0.47
SPTBN1-201ENST00000333896 PLIN1O60240 522 aa12.13□□□□□ -0.47
SPTBN1-201ENST00000333896 KIF3CO14782 793 aa12.12□□□□□ -0.47
SPTBN1-201ENST00000333896 IFIT2P09913 472 aaKnown RBP12.12□□□□□ -0.47
SPTBN1-201ENST00000333896 SEPT14Q6ZU15 432 aa12.12□□□□□ -0.47
SPTBN1-201ENST00000333896 PPFIBP1Q86W92 1011 aa12.12□□□□□ -0.47
SPTBN1-201ENST00000333896 UVSSAQ2YD98 709 aa12.12□□□□□ -0.47
SPTBN1-201ENST00000333896 ZNF396Q96N95 335 aaPredicted RBP12.12□□□□□ -0.47
SPTBN1-201ENST00000333896 HSP90AB4PQ58FF6 505 aa12.12□□□□□ -0.47
SPTBN1-201ENST00000333896 ANKS4BQ8N8V4 417 aa12.12□□□□□ -0.47
SPTBN1-201ENST00000333896 BCL2L13Q9BXK5 485 aa12.12□□□□□ -0.47
SPTBN1-201ENST00000333896 TNMDQ9H2S6 317 aa12.12□□□□□ -0.47
SPTBN1-201ENST00000333896 CCDC18Q5T9S5 1454 aa12.12□□□□□ -0.47
SPTBN1-201ENST00000333896 UTP14CQ5TAP6 766 aaKnown RBP12.12□□□□□ -0.47
SPTBN1-201ENST00000333896 CCDC83Q8IWF9 413 aa12.12□□□□□ -0.47
SPTBN1-201ENST00000333896 C9orf78Q9NZ63 289 aaPredicted RBP12.12□□□□□ -0.47
SPTBN1-201ENST00000333896 JMYQ8N9B5 988 aa12.11□□□□□ -0.47
SPTBN1-201ENST00000333896 ARFGAP3Q9NP61 516 aa12.11□□□□□ -0.47
SPTBN1-201ENST00000333896 RNF187Q5TA31 235 aaPredicted RBP12.11□□□□□ -0.47
SPTBN1-201ENST00000333896 ZWINTO95229 277 aa12.11□□□□□ -0.47
SPTBN1-201ENST00000333896 CCDC183Q5T5S1 534 aa12.11□□□□□ -0.47
SPTBN1-201ENST00000333896 DHX29Q7Z478 1369 aaKnown RBP12.11□□□□□ -0.47
SPTBN1-201ENST00000333896 DAAM2Q86T65 1068 aa12.11□□□□□ -0.47
SPTBN1-201ENST00000333896 TRERF1Q96PN7 1200 aa12.11□□□□□ -0.47
SPTBN1-201ENST00000333896 BANK1Q8NDB2 785 aa12.11□□□□□ -0.47
SPTBN1-201ENST00000333896 SMTNL1A8MU46 457 aa12.1□□□□□ -0.47
SPTBN1-201ENST00000333896 TCHPQ9BT92 498 aa12.1□□□□□ -0.47
SPTBN1-201ENST00000333896 GOLIM4O00461 696 aa12.1□□□□□ -0.47
SPTBN1-201ENST00000333896 UBE4AQ14139 1066 aa12.1□□□□□ -0.47
SPTBN1-201ENST00000333896 WASHC2AQ641Q2 1341 aa12.1□□□□□ -0.47
SPTBN1-201ENST00000333896 SFPQP23246 707 aaKnown RBP eCLIP12.1□□□□□ -0.47
SPTBN1-201ENST00000333896 TXLNAP40222 546 aa12.1□□□□□ -0.47
SPTBN1-201ENST00000333896 LMAN1P49257 510 aa12.1□□□□□ -0.47
SPTBN1-201ENST00000333896 CASQ1P31415 396 aa12.1□□□□□ -0.47
SPTBN1-201ENST00000333896 ERC1Q8IUD2 1116 aa12.1□□□□□ -0.47
SPTBN1-201ENST00000333896 MTMR7Q9Y216 660 aa12.1□□□□□ -0.47
SPTBN1-201ENST00000333896 PDE3AQ14432 1141 aa12.1□□□□□ -0.47
SPTBN1-201ENST00000333896 RALYLQ86SE5 291 aaKnown RBP12.09□□□□□ -0.47
SPTBN1-201ENST00000333896 NEBLO76041 1014 aa12.09□□□□□ -0.47
SPTBN1-201ENST00000333896 POTEDQ86YR6 584 aa12.09□□□□□ -0.47
SPTBN1-201ENST00000333896 CCDC7Q96M83 1385 aa12.09□□□□□ -0.47
SPTBN1-201ENST00000333896 KRT18P05783 430 aaKnown RBP12.09□□□□□ -0.47
SPTBN1-201ENST00000333896 DZIP1LQ8IYY4 767 aaKnown RBP12.09□□□□□ -0.47
SPTBN1-201ENST00000333896 SERPINA10Q9UK55 444 aa12.09□□□□□ -0.47
SPTBN1-201ENST00000333896 CEP57L1Q8IYX8 460 aa12.09□□□□□ -0.47
SPTBN1-201ENST00000333896 CEP112Q8N8E3 955 aa12.09□□□□□ -0.47
SPTBN1-201ENST00000333896 SMARCC1Q92922 1105 aaPredicted RBP12.09□□□□□ -0.47
SPTBN1-201ENST00000333896 RRP7AQ9Y3A4 280 aaKnown RBP12.09□□□□□ -0.47
SPTBN1-201ENST00000333896 MYH10P35580 1976 aa12.08□□□□□ -0.47
SPTBN1-201ENST00000333896 KRT85P78386 507 aa12.08□□□□□ -0.47
SPTBN1-201ENST00000333896 ANKRD1Q15327 319 aa12.08□□□□□ -0.47
SPTBN1-201ENST00000333896 IMMTQ16891 758 aaKnown RBP12.08□□□□□ -0.47
SPTBN1-201ENST00000333896 CEBPZQ03701 1054 aaKnown RBP12.08□□□□□ -0.48
SPTBN1-201ENST00000333896 NUTM1Q86Y26 1132 aa12.08□□□□□ -0.48
SPTBN1-201ENST00000333896 LTV1Q96GA3 475 aaPredicted RBP12.08□□□□□ -0.48
SPTBN1-201ENST00000333896 TANGO6Q9C0B7 1094 aa12.08□□□□□ -0.48
SPTBN1-201ENST00000333896 IKQ13123 557 aaPredicted RBP12.08□□□□□ -0.48
SPTBN1-201ENST00000333896 KIF5CO60282 957 aa12.08□□□□□ -0.48
SPTBN1-201ENST00000333896 PLCD3Q8N3E9 789 aa12.08□□□□□ -0.48
SPTBN1-201ENST00000333896 MPNDQ8N594 471 aa12.08□□□□□ -0.48
SPTBN1-201ENST00000333896 GRIPAP1Q4V328 841 aa12.08□□□□□ -0.48
SPTBN1-201ENST00000333896 B4GALNT4Q76KP1 1039 aa12.08□□□□□ -0.48
SPTBN1-201ENST00000333896 WASHC2CQ9Y4E1 1318 aa12.08□□□□□ -0.48
SPTBN1-201ENST00000333896 USP47Q96K76 1375 aa12.08□□□□□ -0.48
SPTBN1-201ENST00000333896 CCDC160A6NGH7 325 aa12.07□□□□□ -0.48
SPTBN1-201ENST00000333896 EBAG9O00559 213 aa12.07□□□□□ -0.48
SPTBN1-201ENST00000333896 GOPCQ9HD26 462 aa12.07□□□□□ -0.48
SPTBN1-201ENST00000333896 MAP2K2P36507 400 aa12.07□□□□□ -0.48
SPTBN1-201ENST00000333896 XPCQ01831 940 aaPredicted RBP12.07□□□□□ -0.48
SPTBN1-201ENST00000333896 SOGA3Q5TF21 947 aa12.07□□□□□ -0.48
SPTBN1-201ENST00000333896 ZNF397Q8NF99 534 aaPredicted RBP12.07□□□□□ -0.48
SPTBN1-201ENST00000333896 ANAPC15P60006 121 aa12.07□□□□□ -0.48
SPTBN1-201ENST00000333896 POLA1P09884 1462 aaPredicted RBP12.07□□□□□ -0.48
SPTBN1-201ENST00000333896 RBBP5Q15291 538 aaKnown RBP12.07□□□□□ -0.48
SPTBN1-201ENST00000333896 CCDC38Q502W7 563 aa12.07□□□□□ -0.48
SPTBN1-201ENST00000333896 MAP3K11Q16584 847 aa12.07□□□□□ -0.48
SPTBN1-201ENST00000333896 AMPHP49418 695 aa12.06□□□□□ -0.48
SPTBN1-201ENST00000333896 ZFP91Q96JP5 570 aaPredicted RBP12.06□□□□□ -0.48
SPTBN1-201ENST00000333896 MKRN1Q9UHC7 482 aaKnown RBP12.06□□□□□ -0.48
SPTBN1-201ENST00000333896 AKNAQ7Z591 1439 aa12.06□□□□□ -0.48
SPTBN1-201ENST00000333896 PPM1FP49593 454 aaPredicted RBP12.06□□□□□ -0.48
SPTBN1-201ENST00000333896 SMC1AQ14683 1233 aaKnown RBP12.06□□□□□ -0.48
SPTBN1-201ENST00000333896 GCOM1H8Y6P7 765 aaPredicted RBP12.06□□□□□ -0.48
SPTBN1-201ENST00000333896 MYZAPP0CAP1 466 aa12.06□□□□□ -0.48
SPTBN1-201ENST00000333896 STIM1Q13586 685 aa12.06□□□□□ -0.48
SPTBN1-201ENST00000333896 CCDC144AA2RUR9 1427 aa12.05□□□□□ -0.48
SPTBN1-201ENST00000333896 MIA2Q96PC5 1412 aa12.05□□□□□ -0.48
SPTBN1-201ENST00000333896 ATAD2Q6PL18 1390 aa12.05□□□□□ -0.48
SPTBN1-201ENST00000333896 AP1ARQ63HQ0 302 aa12.05□□□□□ -0.48
SPTBN1-201ENST00000333896 ZKSCAN5Q9Y2L8 839 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms