RNA–Protein interactions for RNA: ENST00000333611.8

LIMK2-202, Transcript of LIM domain kinase 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMK2, Length 3,462 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-202ENST00000333611 TRIM34Q9BYJ4 488 aa14.5□□□□□ -0.09
LIMK2-202ENST00000333611 CHAMP1Q96JM3 812 aa14.5□□□□□ -0.09
LIMK2-202ENST00000333611 KIF16BQ96L93 1317 aa14.49□□□□□ -0.09
LIMK2-202ENST00000333611 PRAM1Q96QH2 718 aa14.49□□□□□ -0.09
LIMK2-202ENST00000333611 ZBTB40Q9NUA8 1239 aa14.49□□□□□ -0.09
LIMK2-202ENST00000333611 CCDC39Q9UFE4 941 aa14.49□□□□□ -0.09
LIMK2-202ENST00000333611 HDAC1Q13547 482 aaPredicted RBP14.49□□□□□ -0.09
LIMK2-202ENST00000333611 NOL8Q76FK4 1167 aaKnown RBP14.49□□□□□ -0.09
LIMK2-202ENST00000333611 NOL7Q9UMY1 257 aaKnown RBP14.49□□□□□ -0.09
LIMK2-202ENST00000333611 CCDC27Q2M243 656 aa14.49□□□□□ -0.09
LIMK2-202ENST00000333611 TSPYL6Q8N831 410 aa14.49□□□□□ -0.09
LIMK2-202ENST00000333611 FANCAO15360 1455 aa14.48□□□□□ -0.09
LIMK2-202ENST00000333611 SMC5Q8IY18 1101 aa14.48□□□□□ -0.09
LIMK2-202ENST00000333611 TERF2IPQ9NYB0 399 aa14.48□□□□□ -0.09
LIMK2-202ENST00000333611 MYOM1P52179 1685 aa14.48□□□□□ -0.09
LIMK2-202ENST00000333611 APPP05067 770 aa14.48□□□□□ -0.09
LIMK2-202ENST00000333611 NPM1P06748 294 aaKnown RBP eCLIP14.48□□□□□ -0.09
LIMK2-202ENST00000333611 DCTN1Q14203 1278 aa14.47□□□□□ -0.09
LIMK2-202ENST00000333611 TBC1D9Q6ZT07 1266 aa14.47□□□□□ -0.09
LIMK2-202ENST00000333611 PHF23Q9BUL5 403 aaPredicted RBP14.47□□□□□ -0.09
LIMK2-202ENST00000333611 CABP1Q9NZU7 370 aa14.47□□□□□ -0.09
LIMK2-202ENST00000333611 ATAD2Q6PL18 1390 aa14.47□□□□□ -0.09
LIMK2-202ENST00000333611 ADGRL1O94910 1474 aa14.47□□□□□ -0.09
LIMK2-202ENST00000333611 VGFO15240 615 aaPredicted RBP14.47□□□□□ -0.09
LIMK2-202ENST00000333611 NUCB1Q02818 461 aa14.47□□□□□ -0.09
LIMK2-202ENST00000333611 TMX1Q9H3N1 280 aa14.47□□□□□ -0.09
LIMK2-202ENST00000333611 TTC12Q9H892 705 aaPredicted RBP14.47□□□□□ -0.09
LIMK2-202ENST00000333611 HDGFL2Q7Z4V5 671 aaPredicted RBP14.47□□□□□ -0.09
LIMK2-202ENST00000333611 FYB1O15117 783 aa14.46□□□□□ -0.09
LIMK2-202ENST00000333611 NPHP1O15259 732 aa14.46□□□□□ -0.09
LIMK2-202ENST00000333611 PPP1R9BQ96SB3 815 aa14.46□□□□□ -0.09
LIMK2-202ENST00000333611 ABCC1P33527 1531 aa14.46□□□□□ -0.09
LIMK2-202ENST00000333611 GAS2L2Q8NHY3 880 aa14.46□□□□□ -0.09
LIMK2-202ENST00000333611 ZSCAN23Q3MJ62 389 aa14.46□□□□□ -0.1
LIMK2-202ENST00000333611 RAPGEF3O95398 923 aa14.45□□□□□ -0.1
LIMK2-202ENST00000333611 SPHKAPQ2M3C7 1700 aa14.45□□□□□ -0.1
LIMK2-202ENST00000333611 ZNF518AQ6AHZ1 1483 aa14.45□□□□□ -0.1
LIMK2-202ENST00000333611 CEP152O94986 1710 aa14.45□□□□□ -0.1
LIMK2-202ENST00000333611 A0A1W2PP64 1363 aa14.45□□□□□ -0.1
LIMK2-202ENST00000333611 ABCA6Q8N139 1617 aa14.45□□□□□ -0.1
LIMK2-202ENST00000333611 K7ELQ4 463 aaPredicted RBP14.45□□□□□ -0.1
LIMK2-202ENST00000333611 C16orf71Q8IYS4 520 aaPredicted RBP14.45□□□□□ -0.1
LIMK2-202ENST00000333611 ZNF592Q92610 1267 aa14.45□□□□□ -0.1
LIMK2-202ENST00000333611 PHACTR3Q96KR7 559 aa14.45□□□□□ -0.1
LIMK2-202ENST00000333611 FAM83GA6ND36 823 aa14.44□□□□□ -0.1
LIMK2-202ENST00000333611 NUTM2FA1L443 756 aa14.43□□□□□ -0.1
LIMK2-202ENST00000333611 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.43□□□□□ -0.1
LIMK2-202ENST00000333611 BAG4O95429 457 aaKnown RBP14.43□□□□□ -0.1
LIMK2-202ENST00000333611 SECISBP2LQ93073 1101 aaKnown RBP14.43□□□□□ -0.1
LIMK2-202ENST00000333611 SMARCA5O60264 1052 aaPredicted RBP14.42□□□□□ -0.1
LIMK2-202ENST00000333611 TERF1P54274 439 aa14.42□□□□□ -0.1
LIMK2-202ENST00000333611 IRX5P78411 483 aaPredicted RBP14.42□□□□□ -0.1
LIMK2-202ENST00000333611 PLEKHF1Q96S99 279 aa14.42□□□□□ -0.1
LIMK2-202ENST00000333611 EMILIN1Q9Y6C2 1016 aa14.42□□□□□ -0.1
LIMK2-202ENST00000333611 ANKRD36BQ8N2N9 1353 aa14.42□□□□□ -0.1
LIMK2-202ENST00000333611 SPC24Q8NBT2 197 aa14.42□□□□□ -0.1
LIMK2-202ENST00000333611 BCL2L12Q9HB09 334 aa14.42□□□□□ -0.1
LIMK2-202ENST00000333611 CD109Q6YHK3 1445 aa14.42□□□□□ -0.1
LIMK2-202ENST00000333611 ATP7AQ04656 1500 aa14.42□□□□□ -0.1
LIMK2-202ENST00000333611 CT47B1P0C2W7 299 aaPredicted RBP14.42□□□□□ -0.1
LIMK2-202ENST00000333611 IDI1Q13907 227 aa14.42□□□□□ -0.1
LIMK2-202ENST00000333611 ZFYVE16Q7Z3T8 1539 aa14.41□□□□□ -0.1
LIMK2-202ENST00000333611 TWISTNBQ3B726 338 aaPredicted RBP14.41□□□□□ -0.1
LIMK2-202ENST00000333611 ZNF692Q9BU19 519 aaPredicted RBP14.41□□□□□ -0.1
LIMK2-202ENST00000333611 BMP2KLQ5H9B9 411 aa14.41□□□□□ -0.1
LIMK2-202ENST00000333611 SLC4A10Q6U841 1118 aa14.41□□□□□ -0.1
LIMK2-202ENST00000333611 CDK19Q9BWU1 502 aa14.41□□□□□ -0.1
LIMK2-202ENST00000333611 ZRANB1Q9UGI0 708 aa14.41□□□□□ -0.1
LIMK2-202ENST00000333611 MAP3K4Q9Y6R4 1608 aa14.41□□□□□ -0.1
LIMK2-202ENST00000333611 ZNF500O60304 480 aaPredicted RBP14.4□□□□□ -0.1
LIMK2-202ENST00000333611 PTMSP20962 102 aa14.4□□□□□ -0.1
LIMK2-202ENST00000333611 HMGN5P82970 282 aaKnown RBP14.4□□□□□ -0.1
LIMK2-202ENST00000333611 KRT24Q2M2I5 525 aa14.4□□□□□ -0.1
LIMK2-202ENST00000333611 MYRIPQ8NFW9 859 aa14.4□□□□□ -0.1
LIMK2-202ENST00000333611 CDC45O75419 566 aa14.4□□□□□ -0.1
LIMK2-202ENST00000333611 RRS1Q15050 365 aaKnown RBP14.4□□□□□ -0.1
LIMK2-202ENST00000333611 WAPLQ7Z5K2 1190 aa14.4□□□□□ -0.1
LIMK2-202ENST00000333611 OTUD7AQ8TE49 926 aaPredicted RBP14.4□□□□□ -0.1
LIMK2-202ENST00000333611 RBM25P49756 843 aaKnown RBP14.4□□□□□ -0.1
LIMK2-202ENST00000333611 RAB3GAP1Q15042 981 aa14.4□□□□□ -0.1
LIMK2-202ENST00000333611 USP25Q9UHP3 1055 aa14.4□□□□□ -0.1
LIMK2-202ENST00000333611 CHD1O14646 1710 aa14.39□□□□□ -0.11
LIMK2-202ENST00000333611 KLHL40Q2TBA0 621 aa14.39□□□□□ -0.11
LIMK2-202ENST00000333611 ZNF710Q8N1W2 664 aa14.39□□□□□ -0.11
LIMK2-202ENST00000333611 RTEL1-TNFRSF6BF6WH68 1400 aa14.39□□□□□ -0.11
LIMK2-202ENST00000333611 CCDC66A2RUB6 948 aa14.39□□□□□ -0.11
LIMK2-202ENST00000333611 PKP1Q13835 747 aa14.39□□□□□ -0.11
LIMK2-202ENST00000333611 IQSEC2Q5JU85 1478 aa14.39□□□□□ -0.11
LIMK2-202ENST00000333611 ZBTB7BO15156 539 aaPredicted RBP14.39□□□□□ -0.11
LIMK2-202ENST00000333611 MLECQ14165 292 aa14.39□□□□□ -0.11
LIMK2-202ENST00000333611 TAF3Q5VWG9 929 aa14.39□□□□□ -0.11
LIMK2-202ENST00000333611 C8orf58Q8NAV2 365 aa14.38□□□□□ -0.11
LIMK2-202ENST00000333611 NOLC1Q14978 699 aaKnown RBP eCLIP14.38□□□□□ -0.11
LIMK2-202ENST00000333611 MBIPQ9NS73 344 aa14.38□□□□□ -0.11
LIMK2-202ENST00000333611 GCC1Q96CN9 775 aa14.38□□□□□ -0.11
LIMK2-202ENST00000333611 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.38□□□□□ -0.11
LIMK2-202ENST00000333611 ZCCHC11Q5TAX3 1644 aaKnown RBP14.37□□□□□ -0.11
LIMK2-202ENST00000333611 TSHZ3Q63HK5 1081 aa14.37□□□□□ -0.11
LIMK2-202ENST00000333611 TIGD1Q96MW7 591 aa14.37□□□□□ -0.11
LIMK2-202ENST00000333611 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms