RNA–Protein interactions for RNA: ENST00000332853.8

VSTM4-202, Transcript of V-set and transmembrane domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VSTM4, Length 6,392 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM4-202ENST00000332853 BICD2Q8TD16 824 aa15.75■□□□□ 0.11
VSTM4-202ENST00000332853 CCDC34Q96HJ3 373 aa15.74■□□□□ 0.11
VSTM4-202ENST00000332853 IL1RAPL2Q9NP60 686 aa15.74■□□□□ 0.11
VSTM4-202ENST00000332853 MARCH6O60337 910 aa15.73■□□□□ 0.11
VSTM4-202ENST00000332853 KIF6Q6ZMV9 814 aa15.73■□□□□ 0.11
VSTM4-202ENST00000332853 GOLGA6L19H0YKK7 550 aa15.73■□□□□ 0.11
VSTM4-202ENST00000332853 SMARCA5O60264 1052 aaPredicted RBP15.73■□□□□ 0.11
VSTM4-202ENST00000332853 TRIM29Q14134 588 aa15.73■□□□□ 0.11
VSTM4-202ENST00000332853 SPG7Q9UQ90 795 aa15.73■□□□□ 0.11
VSTM4-202ENST00000332853 DISP1Q96F81 1524 aa15.72■□□□□ 0.11
VSTM4-202ENST00000332853 NUTM2BA6NNL0 878 aaPredicted RBP15.72■□□□□ 0.11
VSTM4-202ENST00000332853 NUTM2EB1AL46 878 aaPredicted RBP15.72■□□□□ 0.11
VSTM4-202ENST00000332853 NUTM2AQ8IVF1 878 aaPredicted RBP15.72■□□□□ 0.11
VSTM4-202ENST00000332853 WDR7Q9Y4E6 1490 aa15.72■□□□□ 0.11
VSTM4-202ENST00000332853 BECN2A8MW95 431 aa15.72■□□□□ 0.11
VSTM4-202ENST00000332853 SRGAP3O43295 1099 aa15.72■□□□□ 0.11
VSTM4-202ENST00000332853 FAM83GA6ND36 823 aa15.72■□□□□ 0.11
VSTM4-202ENST00000332853 PES1O00541 588 aaKnown RBP15.71■□□□□ 0.11
VSTM4-202ENST00000332853 CPLX2Q6PUV4 134 aaKnown RBP15.71■□□□□ 0.11
VSTM4-202ENST00000332853 IFT57Q9NWB7 429 aa15.71■□□□□ 0.11
VSTM4-202ENST00000332853 EXOC6BQ9Y2D4 811 aa15.71■□□□□ 0.11
VSTM4-202ENST00000332853 A2MP01023 1474 aa15.71■□□□□ 0.11
VSTM4-202ENST00000332853 NOL10Q9BSC4 688 aaKnown RBP15.71■□□□□ 0.11
VSTM4-202ENST00000332853 F6X3S4 739 aa15.71■□□□□ 0.1
VSTM4-202ENST00000332853 DNMT1P26358 1616 aaKnown RBP15.7■□□□□ 0.1
VSTM4-202ENST00000332853 PRDM11Q9NQV5 511 aa15.7■□□□□ 0.1
VSTM4-202ENST00000332853 TRAK2O60296 914 aa15.7■□□□□ 0.1
VSTM4-202ENST00000332853 FOXO3O43524 673 aa15.7■□□□□ 0.1
VSTM4-202ENST00000332853 RALYLQ86SE5 291 aaKnown RBP15.69■□□□□ 0.1
VSTM4-202ENST00000332853 ABCA5Q8WWZ7 1642 aa15.69■□□□□ 0.1
VSTM4-202ENST00000332853 NUTM1Q86Y26 1132 aa15.69■□□□□ 0.1
VSTM4-202ENST00000332853 RABEP1Q15276 862 aa15.69■□□□□ 0.1
VSTM4-202ENST00000332853 CHMP4CQ96CF2 233 aa15.69■□□□□ 0.1
VSTM4-202ENST00000332853 TPD52L1Q16890 204 aaPredicted RBP15.68■□□□□ 0.1
VSTM4-202ENST00000332853 ERC1Q8IUD2 1116 aa15.68■□□□□ 0.1
VSTM4-202ENST00000332853 TRIM27P14373 513 aa15.68■□□□□ 0.1
VSTM4-202ENST00000332853 PZPP20742 1482 aa15.68■□□□□ 0.1
VSTM4-202ENST00000332853 LRPPRCP42704 1394 aaKnown RBP15.68■□□□□ 0.1
VSTM4-202ENST00000332853 AACSQ86V21 672 aa15.68■□□□□ 0.1
VSTM4-202ENST00000332853 ERICH2A1L162 156 aa15.68■□□□□ 0.1
VSTM4-202ENST00000332853 AMOTL1Q8IY63 956 aa15.68■□□□□ 0.1
VSTM4-202ENST00000332853 ASXL1Q8IXJ9 1541 aa15.67■□□□□ 0.1
VSTM4-202ENST00000332853 PSMA5P28066 241 aa15.67■□□□□ 0.1
VSTM4-202ENST00000332853 MPRIPQ6WCQ1 1025 aa15.67■□□□□ 0.1
VSTM4-202ENST00000332853 CAVIN1Q6NZI2 390 aaKnown RBP15.67■□□□□ 0.1
VSTM4-202ENST00000332853 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.67■□□□□ 0.1
VSTM4-202ENST00000332853 PRPF40AO75400 957 aaKnown RBP15.67■□□□□ 0.1
VSTM4-202ENST00000332853 CNNM1Q9NRU3 951 aa15.67■□□□□ 0.1
VSTM4-202ENST00000332853 PHF8Q9UPP1 1060 aa15.67■□□□□ 0.1
VSTM4-202ENST00000332853 MTMR7Q9Y216 660 aa15.67■□□□□ 0.1
VSTM4-202ENST00000332853 CCDC85AQ96PX6 553 aaPredicted RBP15.67■□□□□ 0.1
VSTM4-202ENST00000332853 ACEP12821 1306 aa15.67■□□□□ 0.1
VSTM4-202ENST00000332853 STK3Q13188 491 aa15.66■□□□□ 0.1
VSTM4-202ENST00000332853 TTC39AQ5SRH9 613 aa15.66■□□□□ 0.1
VSTM4-202ENST00000332853 RNF214Q8ND24 703 aa15.66■□□□□ 0.1
VSTM4-202ENST00000332853 DHX16O60231 1041 aaKnown RBP15.66■□□□□ 0.1
VSTM4-202ENST00000332853 STK11IPQ8N1F8 1099 aa15.66■□□□□ 0.1
VSTM4-202ENST00000332853 ALDH1L2Q3SY69 923 aa15.66■□□□□ 0.1
VSTM4-202ENST00000332853 CWC27Q6UX04 472 aaKnown RBP15.66■□□□□ 0.1
VSTM4-202ENST00000332853 KCNH5Q8NCM2 988 aa15.66■□□□□ 0.1
VSTM4-202ENST00000332853 ZNF518AQ6AHZ1 1483 aa15.66■□□□□ 0.1
VSTM4-202ENST00000332853 IGHDP01880 384 aa15.65■□□□□ 0.1
VSTM4-202ENST00000332853 TESK2Q96S53 571 aa15.65■□□□□ 0.1
VSTM4-202ENST00000332853 ZRANB1Q9UGI0 708 aa15.65■□□□□ 0.1
VSTM4-202ENST00000332853 K7ELQ4 463 aaPredicted RBP15.65■□□□□ 0.1
VSTM4-202ENST00000332853 ABCC11Q96J66 1382 aa15.64■□□□□ 0.1
VSTM4-202ENST00000332853 RPAP2Q8IXW5 612 aaPredicted RBP15.64■□□□□ 0.09
VSTM4-202ENST00000332853 TAF7Q15545 349 aaPredicted RBP15.64■□□□□ 0.09
VSTM4-202ENST00000332853 MBIPQ9NS73 344 aa15.64■□□□□ 0.09
VSTM4-202ENST00000332853 MAGI3Q5TCQ9 1506 aa15.63■□□□□ 0.09
VSTM4-202ENST00000332853 NSD2O96028 1365 aa15.63■□□□□ 0.09
VSTM4-202ENST00000332853 SPINK5Q9NQ38 1064 aaPredicted RBP15.63■□□□□ 0.09
VSTM4-202ENST00000332853 PIP4K2BP78356 416 aa15.63■□□□□ 0.09
VSTM4-202ENST00000332853 SAMD9Q5K651 1589 aa15.63■□□□□ 0.09
VSTM4-202ENST00000332853 PTCD1O75127 700 aaKnown RBP15.63■□□□□ 0.09
VSTM4-202ENST00000332853 TRIM34Q9BYJ4 488 aa15.63■□□□□ 0.09
VSTM4-202ENST00000332853 SASS6Q6UVJ0 657 aa15.62■□□□□ 0.09
VSTM4-202ENST00000332853 PARD3Q8TEW0 1356 aa15.62■□□□□ 0.09
VSTM4-202ENST00000332853 CEBPZQ03701 1054 aaKnown RBP15.62■□□□□ 0.09
VSTM4-202ENST00000332853 RRP12Q5JTH9 1297 aaKnown RBP15.62■□□□□ 0.09
VSTM4-202ENST00000332853 HIP1O00291 1037 aa15.62■□□□□ 0.09
VSTM4-202ENST00000332853 CCDC158Q5M9N0 1113 aa15.62■□□□□ 0.09
VSTM4-202ENST00000332853 ZNF592Q92610 1267 aa15.62■□□□□ 0.09
VSTM4-202ENST00000332853 TNRQ92752 1358 aa15.62■□□□□ 0.09
VSTM4-202ENST00000332853 SHANK2Q9UPX8 1470 aa15.62■□□□□ 0.09
VSTM4-202ENST00000332853 TBC1D2BQ9UPU7 963 aa15.62■□□□□ 0.09
VSTM4-202ENST00000332853 CEP170Q5SW79 1584 aa15.62■□□□□ 0.09
VSTM4-202ENST00000332853 ANKRD36BQ8N2N9 1353 aa15.62■□□□□ 0.09
VSTM4-202ENST00000332853 FKBP4Q02790 459 aaKnown RBP eCLIP15.61■□□□□ 0.09
VSTM4-202ENST00000332853 NUP160Q12769 1436 aa15.61■□□□□ 0.09
VSTM4-202ENST00000332853 EIF2AK4Q9P2K8 1649 aaKnown RBP15.61■□□□□ 0.09
VSTM4-202ENST00000332853 FIBPO43427 364 aa15.61■□□□□ 0.09
VSTM4-202ENST00000332853 CARD14Q9BXL6 1004 aa15.61■□□□□ 0.09
VSTM4-202ENST00000332853 NASPP49321 788 aaPredicted RBP15.6■□□□□ 0.09
VSTM4-202ENST00000332853 HSP90AB2PQ58FF8 381 aa15.6■□□□□ 0.09
VSTM4-202ENST00000332853 PPIP5K1Q6PFW1 1433 aa15.6■□□□□ 0.09
VSTM4-202ENST00000332853 CCDC57Q2TAC2 916 aa15.6■□□□□ 0.09
VSTM4-202ENST00000332853 BRPF3Q9ULD4 1205 aa15.6■□□□□ 0.09
VSTM4-202ENST00000332853 CYP46A1Q9Y6A2 500 aa15.6■□□□□ 0.09
VSTM4-202ENST00000332853 PDE4CQ08493 712 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 91.8 ms