RNA–Protein interactions for RNA: ENST00000332118.10

SRPRA-201, Transcript of SRP receptor subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRPRA, Length 3,069 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-201ENST00000332118 CALD1Q05682 793 aaKnown RBP17.65■□□□□ 0.42
SRPRA-201ENST00000332118 CAMTA1Q9Y6Y1 1673 aa17.65■□□□□ 0.42
SRPRA-201ENST00000332118 KCNA6P17658 529 aa17.65■□□□□ 0.42
SRPRA-201ENST00000332118 ANKLE2Q86XL3 938 aa17.65■□□□□ 0.42
SRPRA-201ENST00000332118 LTN1O94822 1766 aa17.64■□□□□ 0.41
SRPRA-201ENST00000332118 IFT57Q9NWB7 429 aa17.64■□□□□ 0.41
SRPRA-201ENST00000332118 RTL1A6NKG5 1358 aa17.64■□□□□ 0.41
SRPRA-201ENST00000332118 NEUROD2Q15784 382 aa17.63■□□□□ 0.41
SRPRA-201ENST00000332118 FLT4P35916 1363 aa17.63■□□□□ 0.41
SRPRA-201ENST00000332118 SLIT3O75094 1523 aa17.62■□□□□ 0.41
SRPRA-201ENST00000332118 LMOD3Q0VAK6 560 aa17.62■□□□□ 0.41
SRPRA-201ENST00000332118 CLUAP1Q96AJ1 413 aa17.62■□□□□ 0.41
SRPRA-201ENST00000332118 PHACTR3Q96KR7 559 aa17.62■□□□□ 0.41
SRPRA-201ENST00000332118 EIF4A2Q14240 407 aaKnown RBP17.61■□□□□ 0.41
SRPRA-201ENST00000332118 FBLN1P23142 703 aa17.61■□□□□ 0.41
SRPRA-201ENST00000332118 BACH2Q9BYV9 841 aa17.61■□□□□ 0.41
SRPRA-201ENST00000332118 DNAJC5Q9H3Z4 198 aa17.6■□□□□ 0.41
SRPRA-201ENST00000332118 EXOSC9Q06265 439 aaKnown RBP17.59■□□□□ 0.41
SRPRA-201ENST00000332118 RRS1Q15050 365 aaKnown RBP17.59■□□□□ 0.41
SRPRA-201ENST00000332118 LMTK3Q96Q04 1460 aa17.59■□□□□ 0.41
SRPRA-201ENST00000332118 MSH5O43196 834 aa17.59■□□□□ 0.41
SRPRA-201ENST00000332118 NCOA3Q9Y6Q9 1424 aa17.59■□□□□ 0.41
SRPRA-201ENST00000332118 NCAPD2Q15021 1401 aa17.58■□□□□ 0.41
SRPRA-201ENST00000332118 N4BP2Q86UW6 1770 aaPredicted RBP17.58■□□□□ 0.41
SRPRA-201ENST00000332118 RLBP1P12271 317 aa17.58■□□□□ 0.4
SRPRA-201ENST00000332118 MVPQ14764 893 aaKnown RBP17.58■□□□□ 0.4
SRPRA-201ENST00000332118 ZKSCAN2Q63HK3 967 aa17.58■□□□□ 0.4
SRPRA-201ENST00000332118 TSR2Q969E8 191 aaKnown RBP17.58■□□□□ 0.4
SRPRA-201ENST00000332118 IGSF1Q8N6C5 1336 aa17.58■□□□□ 0.4
SRPRA-201ENST00000332118 KIF16BQ96L93 1317 aa17.58■□□□□ 0.4
SRPRA-201ENST00000332118 ARHGAP45Q92619 1136 aa17.57■□□□□ 0.4
SRPRA-201ENST00000332118 NEFMP07197 916 aa17.57■□□□□ 0.4
SRPRA-201ENST00000332118 GNAI1P63096 354 aa17.57■□□□□ 0.4
SRPRA-201ENST00000332118 CFAP44Q96MT7 982 aa17.57■□□□□ 0.4
SRPRA-201ENST00000332118 ALS2Q96Q42 1657 aa17.57■□□□□ 0.4
SRPRA-201ENST00000332118 MAP3K19Q56UN5 1328 aa17.56■□□□□ 0.4
SRPRA-201ENST00000332118 CRB1P82279 1406 aa17.56■□□□□ 0.4
SRPRA-201ENST00000332118 PANK1Q8TE04 598 aa17.56■□□□□ 0.4
SRPRA-201ENST00000332118 SSH1Q8WYL5 1049 aa17.56■□□□□ 0.4
SRPRA-201ENST00000332118 MED1Q15648 1581 aaPredicted RBP17.55■□□□□ 0.4
SRPRA-201ENST00000332118 PDE4AP27815 886 aa17.55■□□□□ 0.4
SRPRA-201ENST00000332118 KIAA0232Q92628 1395 aa17.55■□□□□ 0.4
SRPRA-201ENST00000332118 STRCP1A6NGW2 1772 aa17.55■□□□□ 0.4
SRPRA-201ENST00000332118 LMO7Q8WWI1 1683 aa17.55■□□□□ 0.4
SRPRA-201ENST00000332118 DCCP43146 1447 aa17.54■□□□□ 0.4
SRPRA-201ENST00000332118 PMFBP1Q8TBY8 1022 aa17.54■□□□□ 0.4
SRPRA-201ENST00000332118 ATF7IPQ6VMQ6 1270 aa17.54■□□□□ 0.4
SRPRA-201ENST00000332118 IGHDP01880 384 aa17.53■□□□□ 0.4
SRPRA-201ENST00000332118 HMOX1P09601 288 aa17.53■□□□□ 0.4
SRPRA-201ENST00000332118 DZIP1LQ8IYY4 767 aaKnown RBP17.53■□□□□ 0.4
SRPRA-201ENST00000332118 COG6Q9Y2V7 657 aa17.53■□□□□ 0.4
SRPRA-201ENST00000332118 VAMP4O75379 141 aa17.53■□□□□ 0.4
SRPRA-201ENST00000332118 TRIM27P14373 513 aa17.53■□□□□ 0.4
SRPRA-201ENST00000332118 ABCC6O95255 1503 aa17.52■□□□□ 0.4
SRPRA-201ENST00000332118 CRYBG1Q9Y4K1 1723 aa17.51■□□□□ 0.39
SRPRA-201ENST00000332118 PPM1GO15355 546 aaPredicted RBP17.51■□□□□ 0.39
SRPRA-201ENST00000332118 ADAMTS7Q9UKP4 1686 aa17.51■□□□□ 0.39
SRPRA-201ENST00000332118 FAM208AQ9UK61 1670 aaKnown RBP17.51■□□□□ 0.39
SRPRA-201ENST00000332118 HDAC1Q13547 482 aaPredicted RBP17.51■□□□□ 0.39
SRPRA-201ENST00000332118 MBIPQ9NS73 344 aa17.51■□□□□ 0.39
SRPRA-201ENST00000332118 HSP90AB2PQ58FF8 381 aa17.5■□□□□ 0.39
SRPRA-201ENST00000332118 NGDNQ8NEJ9 315 aaKnown RBP17.5■□□□□ 0.39
SRPRA-201ENST00000332118 HTATSF1O43719 755 aaKnown RBP17.5■□□□□ 0.39
SRPRA-201ENST00000332118 CANXP27824 592 aaKnown RBP17.5■□□□□ 0.39
SRPRA-201ENST00000332118 SMC4Q9NTJ3 1288 aa17.5■□□□□ 0.39
SRPRA-201ENST00000332118 IPO8O15397 1037 aaKnown RBP17.49■□□□□ 0.39
SRPRA-201ENST00000332118 MRPL50Q8N5N7 158 aaKnown RBP17.49■□□□□ 0.39
SRPRA-201ENST00000332118 DDX19BQ9UMR2 479 aa17.49■□□□□ 0.39
SRPRA-201ENST00000332118 TNNQ9UQP3 1299 aa17.49■□□□□ 0.39
SRPRA-201ENST00000332118 PCDHB15Q9Y5E8 787 aa17.49■□□□□ 0.39
SRPRA-201ENST00000332118 ABCC4O15439 1325 aa17.49■□□□□ 0.39
SRPRA-201ENST00000332118 CHL1O00533 1208 aa17.49■□□□□ 0.39
SRPRA-201ENST00000332118 PLPPR3Q6T4P5 718 aa17.49■□□□□ 0.39
SRPRA-201ENST00000332118 PHF8Q9UPP1 1060 aa17.49■□□□□ 0.39
SRPRA-201ENST00000332118 C8orf34Q49A92 452 aa17.48■□□□□ 0.39
SRPRA-201ENST00000332118 FRAT1Q92837 279 aaPredicted RBP17.48■□□□□ 0.39
SRPRA-201ENST00000332118 KDM3BQ7LBC6 1761 aa17.47■□□□□ 0.39
SRPRA-201ENST00000332118 SULT6B1Q6IMI4 303 aa17.47■□□□□ 0.39
SRPRA-201ENST00000332118 AEBP1Q8IUX7 1158 aa17.47■□□□□ 0.39
SRPRA-201ENST00000332118 NOB1Q9ULX3 412 aaKnown RBP17.47■□□□□ 0.39
SRPRA-201ENST00000332118 RGS12O14924 1447 aa17.47■□□□□ 0.39
SRPRA-201ENST00000332118 HOXC9P31274 260 aa17.46■□□□□ 0.39
SRPRA-201ENST00000332118 ZBTB40Q9NUA8 1239 aa17.46■□□□□ 0.39
SRPRA-201ENST00000332118 XIRP1Q702N8 1843 aaKnown RBP17.46■□□□□ 0.39
SRPRA-201ENST00000332118 CACNA1FO60840 1977 aa17.46■□□□□ 0.39
SRPRA-201ENST00000332118 PLEKHG2Q9H7P9 1386 aa17.46■□□□□ 0.39
SRPRA-201ENST00000332118 FAM161AQ3B820 660 aa17.46■□□□□ 0.38
SRPRA-201ENST00000332118 USP19O94966 1318 aa17.46■□□□□ 0.38
SRPRA-201ENST00000332118 IPO9Q96P70 1041 aaKnown RBP17.45■□□□□ 0.38
SRPRA-201ENST00000332118 BCL2L13Q9BXK5 485 aa17.45■□□□□ 0.38
SRPRA-201ENST00000332118 BABAM1Q9NWV8 329 aa17.45■□□□□ 0.38
SRPRA-201ENST00000332118 SOS1Q07889 1333 aaPredicted RBP17.45■□□□□ 0.38
SRPRA-201ENST00000332118 C1orf167Q5SNV9 1468 aa17.44■□□□□ 0.38
SRPRA-201ENST00000332118 OVOS2A0A0G2JMS6 1433 aa17.44■□□□□ 0.38
SRPRA-201ENST00000332118 NUTM2FA1L443 756 aa17.44■□□□□ 0.38
SRPRA-201ENST00000332118 HAP1P54257 671 aaPredicted RBP17.44■□□□□ 0.38
SRPRA-201ENST00000332118 RWDD1Q9H446 243 aaPredicted RBP17.44■□□□□ 0.38
SRPRA-201ENST00000332118 SIPA1L3O60292 1781 aaPredicted RBP17.44■□□□□ 0.38
SRPRA-201ENST00000332118 EYA1Q99502 592 aa17.43■□□□□ 0.38
SRPRA-201ENST00000332118 RGPD2P0DJD1 1756 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms