RNA–Protein interactions for RNA: ENST00000331239.8

C11orf54-201, Transcript of chromosome 11 open reading frame 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C11orf54, Length 2,522 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-201ENST00000331239 PIP4K2BP78356 416 aa12.64□□□□□ -0.39
C11orf54-201ENST00000331239 COL14A1Q05707 1796 aaKnown RBP12.64□□□□□ -0.39
C11orf54-201ENST00000331239 DIAPH1O60610 1272 aaKnown RBP12.64□□□□□ -0.39
C11orf54-201ENST00000331239 LMOD2Q6P5Q4 547 aa12.64□□□□□ -0.39
C11orf54-201ENST00000331239 AMPHP49418 695 aa12.63□□□□□ -0.39
C11orf54-201ENST00000331239 HOXC9P31274 260 aa12.63□□□□□ -0.39
C11orf54-201ENST00000331239 LMO7Q8WWI1 1683 aa12.62□□□□□ -0.39
C11orf54-201ENST00000331239 RGPD1P0DJD0 1748 aa12.62□□□□□ -0.39
C11orf54-201ENST00000331239 WDR43Q15061 677 aaKnown RBP eCLIP12.62□□□□□ -0.39
C11orf54-201ENST00000331239 IL13P35225 146 aa12.61□□□□□ -0.39
C11orf54-201ENST00000331239 TNNT2P45379 298 aaPredicted RBP12.61□□□□□ -0.39
C11orf54-201ENST00000331239 NUTM2GQ5VZR2 741 aa12.61□□□□□ -0.39
C11orf54-201ENST00000331239 EMILIN1Q9Y6C2 1016 aa12.61□□□□□ -0.39
C11orf54-201ENST00000331239 CAMTA1Q9Y6Y1 1673 aa12.61□□□□□ -0.39
C11orf54-201ENST00000331239 NCAPD2Q15021 1401 aa12.61□□□□□ -0.39
C11orf54-201ENST00000331239 FBXO41Q8TF61 875 aa12.61□□□□□ -0.39
C11orf54-201ENST00000331239 NWD2Q9ULI1 1742 aa12.61□□□□□ -0.39
C11orf54-201ENST00000331239 FCHSD2O94868 740 aa12.6□□□□□ -0.39
C11orf54-201ENST00000331239 RRS1Q15050 365 aaKnown RBP12.6□□□□□ -0.39
C11orf54-201ENST00000331239 ADRA2BP18089 450 aa12.59□□□□□ -0.39
C11orf54-201ENST00000331239 HNRNPUQ00839 825 aaKnown RBP eCLIP12.59□□□□□ -0.39
C11orf54-201ENST00000331239 TSHZ2Q9NRE2 1034 aa12.59□□□□□ -0.39
C11orf54-201ENST00000331239 HAP1P54257 671 aaPredicted RBP12.59□□□□□ -0.39
C11orf54-201ENST00000331239 KIAA0232Q92628 1395 aa12.59□□□□□ -0.39
C11orf54-201ENST00000331239 KDRP35968 1356 aa12.58□□□□□ -0.4
C11orf54-201ENST00000331239 CCDC184Q52MB2 194 aa12.58□□□□□ -0.4
C11orf54-201ENST00000331239 IGSF1Q8N6C5 1336 aa12.58□□□□□ -0.4
C11orf54-201ENST00000331239 EIF4A2Q14240 407 aaKnown RBP12.57□□□□□ -0.4
C11orf54-201ENST00000331239 CNGB1Q14028 1251 aaPredicted RBP12.57□□□□□ -0.4
C11orf54-201ENST00000331239 PRDM11Q9NQV5 511 aa12.57□□□□□ -0.4
C11orf54-201ENST00000331239 HSP90AB2PQ58FF8 381 aa12.56□□□□□ -0.4
C11orf54-201ENST00000331239 DAXXQ9UER7 740 aaPredicted RBP12.56□□□□□ -0.4
C11orf54-201ENST00000331239 PPM1GO15355 546 aaPredicted RBP12.56□□□□□ -0.4
C11orf54-201ENST00000331239 HSPA1LP34931 641 aa12.56□□□□□ -0.4
C11orf54-201ENST00000331239 ERBB3P21860 1342 aa12.56□□□□□ -0.4
C11orf54-201ENST00000331239 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.56□□□□□ -0.4
C11orf54-201ENST00000331239 RGPD5Q99666 1765 aa12.55□□□□□ -0.4
C11orf54-201ENST00000331239 CABLES1Q8TDN4 633 aa12.55□□□□□ -0.4
C11orf54-201ENST00000331239 RUNDC1Q96C34 613 aa12.55□□□□□ -0.4
C11orf54-201ENST00000331239 ADAMTS8Q9UP79 889 aa12.55□□□□□ -0.4
C11orf54-201ENST00000331239 NEFMP07197 916 aa12.54□□□□□ -0.4
C11orf54-201ENST00000331239 ZC3H6P61129 1189 aaKnown RBP12.54□□□□□ -0.4
C11orf54-201ENST00000331239 WDR17Q8IZU2 1322 aa12.54□□□□□ -0.4
C11orf54-201ENST00000331239 COL5A2P05997 1499 aaPredicted RBP12.54□□□□□ -0.4
C11orf54-201ENST00000331239 SLIT2O94813 1529 aa12.54□□□□□ -0.4
C11orf54-201ENST00000331239 PLCH1Q4KWH8 1693 aa12.54□□□□□ -0.4
C11orf54-201ENST00000331239 U2AF1L5P0DN76 240 aaPredicted RBP12.54□□□□□ -0.4
C11orf54-201ENST00000331239 FBLN1P23142 703 aa12.54□□□□□ -0.4
C11orf54-201ENST00000331239 U2AF1Q01081 240 aaKnown RBP eCLIP12.54□□□□□ -0.4
C11orf54-201ENST00000331239 ANKRD24Q8TF21 1146 aa12.54□□□□□ -0.4
C11orf54-201ENST00000331239 FAM83GA6ND36 823 aa12.53□□□□□ -0.4
C11orf54-201ENST00000331239 NRAPQ86VF7 1730 aa12.53□□□□□ -0.4
C11orf54-201ENST00000331239 SOX12O15370 315 aa12.52□□□□□ -0.4
C11orf54-201ENST00000331239 EYA1Q99502 592 aa12.52□□□□□ -0.4
C11orf54-201ENST00000331239 CARD10Q9BWT7 1032 aa12.52□□□□□ -0.4
C11orf54-201ENST00000331239 RSPH6AQ9H0K4 717 aa12.52□□□□□ -0.4
C11orf54-201ENST00000331239 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.52□□□□□ -0.48e-7■■■□□ 14.9
C11orf54-201ENST00000331239 CCDC27Q2M243 656 aa12.52□□□□□ -0.41
C11orf54-201ENST00000331239 FAM9BQ8IZU0 186 aa12.52□□□□□ -0.41
C11orf54-201ENST00000331239 FNBP4Q8N3X1 1017 aaPredicted RBP12.52□□□□□ -0.41
C11orf54-201ENST00000331239 PLEKHF1Q96S99 279 aa12.52□□□□□ -0.41
C11orf54-201ENST00000331239 AXIN2Q9Y2T1 843 aa12.52□□□□□ -0.41
C11orf54-201ENST00000331239 THRAP3Q9Y2W1 955 aaKnown RBP12.52□□□□□ -0.41
C11orf54-201ENST00000331239 U2SURPO15042 1029 aaKnown RBP12.51□□□□□ -0.41
C11orf54-201ENST00000331239 CDCA7Q9BWT1 371 aaPredicted RBP12.51□□□□□ -0.41
C11orf54-201ENST00000331239 CRB1P82279 1406 aa12.51□□□□□ -0.41
C11orf54-201ENST00000331239 AMOTQ4VCS5 1084 aa12.5□□□□□ -0.41
C11orf54-201ENST00000331239 HTATSF1O43719 755 aaKnown RBP12.5□□□□□ -0.41
C11orf54-201ENST00000331239 MAPK8IP3Q9UPT6 1336 aa12.49□□□□□ -0.41
C11orf54-201ENST00000331239 PARP4Q9UKK3 1724 aaKnown RBP12.49□□□□□ -0.41
C11orf54-201ENST00000331239 EVA1CP58658 441 aa12.49□□□□□ -0.41
C11orf54-201ENST00000331239 LMOD3Q0VAK6 560 aa12.49□□□□□ -0.41
C11orf54-201ENST00000331239 PDE3BQ13370 1112 aa12.49□□□□□ -0.41
C11orf54-201ENST00000331239 ZBED9Q6R2W3 1325 aa12.48□□□□□ -0.41
C11orf54-201ENST00000331239 NBPF6Q5VWK0 638 aa12.48□□□□□ -0.41
C11orf54-201ENST00000331239 SULT6B1Q6IMI4 303 aa12.48□□□□□ -0.41
C11orf54-201ENST00000331239 NBPF4Q96M43 638 aa12.48□□□□□ -0.41
C11orf54-201ENST00000331239 RGPD2P0DJD1 1756 aa12.48□□□□□ -0.41
C11orf54-201ENST00000331239 GAS2L2Q8NHY3 880 aa12.48□□□□□ -0.41
C11orf54-201ENST00000331239 CHRNA2Q15822 529 aa12.47□□□□□ -0.41
C11orf54-201ENST00000331239 UNC5CLQ8IV45 518 aa12.47□□□□□ -0.41
C11orf54-201ENST00000331239 BTG4Q9NY30 223 aa12.47□□□□□ -0.41
C11orf54-201ENST00000331239 LRP6O75581 1613 aa12.47□□□□□ -0.41
C11orf54-201ENST00000331239 PKD1L3Q7Z443 1732 aa12.47□□□□□ -0.41
C11orf54-201ENST00000331239 CSB-PGBD3P0DP91 1061 aa12.47□□□□□ -0.41
C11orf54-201ENST00000331239 WNK3Q9BYP7 1800 aa12.46□□□□□ -0.41
C11orf54-201ENST00000331239 PRKAR2BP31323 418 aa12.46□□□□□ -0.41
C11orf54-201ENST00000331239 VPS72Q15906 364 aa12.46□□□□□ -0.41
C11orf54-201ENST00000331239 PLEKHO1Q53GL0 409 aaPredicted RBP12.46□□□□□ -0.41
C11orf54-201ENST00000331239 ZBTB7CA1YPR0 619 aa12.46□□□□□ -0.42
C11orf54-201ENST00000331239 CALD1Q05682 793 aaKnown RBP12.46□□□□□ -0.42
C11orf54-201ENST00000331239 NFE2L2Q16236 605 aa12.46□□□□□ -0.42
C11orf54-201ENST00000331239 BARGINQ6ZT62 677 aa12.46□□□□□ -0.42
C11orf54-201ENST00000331239 BCL11AQ9H165 835 aa12.46□□□□□ -0.42
C11orf54-201ENST00000331239 OVOS2A0A0G2JMS6 1433 aa12.46□□□□□ -0.42
C11orf54-201ENST00000331239 NLRP2Q9NX02 1062 aa12.45□□□□□ -0.42
C11orf54-201ENST00000331239 BCL9LQ86UU0 1499 aa12.45□□□□□ -0.42
C11orf54-201ENST00000331239 NUTM2BA6NNL0 878 aaPredicted RBP12.45□□□□□ -0.42
C11orf54-201ENST00000331239 NUTM2EB1AL46 878 aaPredicted RBP12.45□□□□□ -0.42
C11orf54-201ENST00000331239 TATP17735 454 aaPredicted RBP12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms