RNA–Protein interactions for RNA: ENST00000329970.7

GTF3C6-201, Transcript of general transcription factor IIIC subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C6, Length 952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C6-201ENST00000329970 EDC4Q6P2E9 1401 aaKnown RBP19.22■□□□□ 0.67
GTF3C6-201ENST00000329970 C11orf95C9JLR9 678 aaPredicted RBP19.21■□□□□ 0.67
GTF3C6-201ENST00000329970 FAM182BQ5T319 152 aa19.21■□□□□ 0.67
GTF3C6-201ENST00000329970 TESK2Q96S53 571 aa19.21■□□□□ 0.67
GTF3C6-201ENST00000329970 WDR17Q8IZU2 1322 aa19.21■□□□□ 0.67
GTF3C6-201ENST00000329970 RREB1Q92766 1687 aa19.2■□□□□ 0.66
GTF3C6-201ENST00000329970 PDE3BQ13370 1112 aa19.2■□□□□ 0.66
GTF3C6-201ENST00000329970 LRP5O75197 1615 aa19.2■□□□□ 0.66
GTF3C6-201ENST00000329970 PARD3Q8TEW0 1356 aa19.19■□□□□ 0.66
GTF3C6-201ENST00000329970 HDGFL2Q7Z4V5 671 aaPredicted RBP19.19■□□□□ 0.66
GTF3C6-201ENST00000329970 AXIN2Q9Y2T1 843 aa19.19■□□□□ 0.66
GTF3C6-201ENST00000329970 RGPD3A6NKT7 1758 aaPredicted RBP19.19■□□□□ 0.66
GTF3C6-201ENST00000329970 RGPD4Q7Z3J3 1758 aa19.19■□□□□ 0.66
GTF3C6-201ENST00000329970 A0A1W2PP64 1363 aa19.18■□□□□ 0.66
GTF3C6-201ENST00000329970 SLC12A5Q9H2X9 1139 aa19.17■□□□□ 0.66
GTF3C6-201ENST00000329970 TERF2IPQ9NYB0 399 aa19.17■□□□□ 0.66
GTF3C6-201ENST00000329970 CLSPNQ9HAW4 1339 aa19.17■□□□□ 0.66
GTF3C6-201ENST00000329970 ST20-MTHFSA0A0A6YYL1 179 aa19.16■□□□□ 0.66
GTF3C6-201ENST00000329970 EN1Q05925 392 aaPredicted RBP19.16■□□□□ 0.66
GTF3C6-201ENST00000329970 TOM1L2Q6ZVM7 507 aa19.16■□□□□ 0.66
GTF3C6-201ENST00000329970 TMC1Q8TDI8 760 aa19.16■□□□□ 0.66
GTF3C6-201ENST00000329970 CDCA7Q9BWT1 371 aaPredicted RBP19.16■□□□□ 0.66
GTF3C6-201ENST00000329970 TIMELESSQ9UNS1 1208 aa19.16■□□□□ 0.66
GTF3C6-201ENST00000329970 OVOS2A0A0G2JMS6 1433 aa19.16■□□□□ 0.66
GTF3C6-201ENST00000329970 OVOS2A0A0J9YW53 1432 aa19.16■□□□□ 0.66
GTF3C6-201ENST00000329970 OVOS2Q6IE36 1432 aa19.16■□□□□ 0.66
GTF3C6-201ENST00000329970 ZBTB7CA1YPR0 619 aa19.15■□□□□ 0.66
GTF3C6-201ENST00000329970 TRIM37O94972 964 aa19.15■□□□□ 0.66
GTF3C6-201ENST00000329970 BCL9O00512 1426 aa19.15■□□□□ 0.66
GTF3C6-201ENST00000329970 NUP188Q5SRE5 1749 aa19.14■□□□□ 0.66
GTF3C6-201ENST00000329970 CAMKK2Q96RR4 588 aa19.14■□□□□ 0.65
GTF3C6-201ENST00000329970 CARD10Q9BWT7 1032 aa19.14■□□□□ 0.65
GTF3C6-201ENST00000329970 FAM208AQ9UK61 1670 aaKnown RBP19.14■□□□□ 0.65
GTF3C6-201ENST00000329970 NME9Q86XW9 330 aa19.13■□□□□ 0.65
GTF3C6-201ENST00000329970 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.13■□□□□ 0.65
GTF3C6-201ENST00000329970 CCDC7Q96M83 1385 aa19.13■□□□□ 0.65
GTF3C6-201ENST00000329970 USP47Q96K76 1375 aa19.11■□□□□ 0.65
GTF3C6-201ENST00000329970 DDB1Q16531 1140 aa19.11■□□□□ 0.65
GTF3C6-201ENST00000329970 ANKRD36BQ8N2N9 1353 aa19.1■□□□□ 0.65
GTF3C6-201ENST00000329970 ERBB3P21860 1342 aa19.1■□□□□ 0.65
GTF3C6-201ENST00000329970 SOX12O15370 315 aa19.1■□□□□ 0.65
GTF3C6-201ENST00000329970 APBA3O96018 575 aa19.1■□□□□ 0.65
GTF3C6-201ENST00000329970 EZH2Q15910 746 aaKnown RBP19.1■□□□□ 0.65
GTF3C6-201ENST00000329970 CSB-PGBD3P0DP91 1061 aa19.08■□□□□ 0.64
GTF3C6-201ENST00000329970 TMF1P82094 1093 aa19.07■□□□□ 0.64
GTF3C6-201ENST00000329970 TNS2Q63HR2 1409 aa19.07■□□□□ 0.64
GTF3C6-201ENST00000329970 KIF20BQ96Q89 1820 aa19.06■□□□□ 0.64
GTF3C6-201ENST00000329970 MYOM1P52179 1685 aa19.05■□□□□ 0.64
GTF3C6-201ENST00000329970 PSDA5PKW4 1024 aaPredicted RBP19.04■□□□□ 0.64
GTF3C6-201ENST00000329970 PLSCR1O15162 318 aa19.04■□□□□ 0.64
GTF3C6-201ENST00000329970 CDCA8Q53HL2 280 aa19.04■□□□□ 0.64
GTF3C6-201ENST00000329970 MARCH10Q8NA82 808 aaPredicted RBP19.04■□□□□ 0.64
GTF3C6-201ENST00000329970 NHSQ6T4R5 1651 aa19.03■□□□□ 0.64
GTF3C6-201ENST00000329970 EXOC5O00471 708 aa19.02■□□□□ 0.64
GTF3C6-201ENST00000329970 IP6K1Q92551 441 aa19.02■□□□□ 0.64
GTF3C6-201ENST00000329970 COG3Q96JB2 828 aa19.02■□□□□ 0.64
GTF3C6-201ENST00000329970 BCL11BQ9C0K0 894 aaPredicted RBP19.02■□□□□ 0.64
GTF3C6-201ENST00000329970 R3HDM1Q15032 1099 aaKnown RBP19.01■□□□□ 0.63
GTF3C6-201ENST00000329970 ANKRD24Q8TF21 1146 aa19.01■□□□□ 0.63
GTF3C6-201ENST00000329970 RTL1A6NKG5 1358 aa19■□□□□ 0.63
GTF3C6-201ENST00000329970 NBPF14Q5TI25 921 aa18.99■□□□□ 0.63
GTF3C6-201ENST00000329970 NLRP2Q9NX02 1062 aa18.99■□□□□ 0.63
GTF3C6-201ENST00000329970 RGPD2P0DJD1 1756 aa18.98■□□□□ 0.63
GTF3C6-201ENST00000329970 IL2RBP14784 551 aa18.98■□□□□ 0.63
GTF3C6-201ENST00000329970 KAT6BQ8WYB5 2073 aa18.97■□□□□ 0.63
GTF3C6-201ENST00000329970 MAP3K19Q56UN5 1328 aa18.97■□□□□ 0.63
GTF3C6-201ENST00000329970 FYB1O15117 783 aa18.96■□□□□ 0.63
GTF3C6-201ENST00000329970 HOXC9P31274 260 aa18.95■□□□□ 0.62
GTF3C6-201ENST00000329970 BTAF1O14981 1849 aa18.95■□□□□ 0.62
GTF3C6-201ENST00000329970 KIF24Q5T7B8 1368 aa18.94■□□□□ 0.62
GTF3C6-201ENST00000329970 SHANK3Q9BYB0 1731 aa18.94■□□□□ 0.62
GTF3C6-201ENST00000329970 PCGF6Q9BYE7 350 aa18.94■□□□□ 0.62
GTF3C6-201ENST00000329970 ANKRD26Q9UPS8 1709 aa18.94■□□□□ 0.62
GTF3C6-201ENST00000329970 CASZ1Q86V15 1759 aa18.93■□□□□ 0.62
GTF3C6-201ENST00000329970 PTF1AQ7RTS3 328 aa18.93■□□□□ 0.62
GTF3C6-201ENST00000329970 AMPHP49418 695 aa18.92■□□□□ 0.62
GTF3C6-201ENST00000329970 GGNBP2Q9H3C7 697 aa18.91■□□□□ 0.62
GTF3C6-201ENST00000329970 PROM2Q8N271 834 aa18.9■□□□□ 0.62
GTF3C6-201ENST00000329970 MAP2P11137 1827 aaKnown RBP18.9■□□□□ 0.62
GTF3C6-201ENST00000329970 SMG6Q86US8 1419 aaKnown RBP18.89■□□□□ 0.61
GTF3C6-201ENST00000329970 NSD3Q9BZ95 1437 aa18.89■□□□□ 0.61
GTF3C6-201ENST00000329970 PAPPAQ13219 1627 aa18.89■□□□□ 0.61
GTF3C6-201ENST00000329970 FBLN1P23142 703 aa18.88■□□□□ 0.61
GTF3C6-201ENST00000329970 CARD14Q9BXL6 1004 aa18.88■□□□□ 0.61
GTF3C6-201ENST00000329970 INSRP06213 1382 aa18.88■□□□□ 0.61
GTF3C6-201ENST00000329970 KCNQ2O43526 872 aa18.87■□□□□ 0.61
GTF3C6-201ENST00000329970 FLT4P35916 1363 aa18.87■□□□□ 0.61
GTF3C6-201ENST00000329970 CGNL1Q0VF96 1302 aa18.87■□□□□ 0.61
GTF3C6-201ENST00000329970 RRS1Q15050 365 aaKnown RBP18.87■□□□□ 0.61
GTF3C6-201ENST00000329970 TXNRD1Q16881 649 aa18.87■□□□□ 0.61
GTF3C6-201ENST00000329970 DOT1LQ8TEK3 1739 aa18.87■□□□□ 0.61
GTF3C6-201ENST00000329970 LTV1Q96GA3 475 aaPredicted RBP18.87■□□□□ 0.61
GTF3C6-201ENST00000329970 MEGF6O75095 1541 aa18.86■□□□□ 0.61
GTF3C6-201ENST00000329970 ANO8Q9HCE9 1232 aaPredicted RBP18.86■□□□□ 0.61
GTF3C6-201ENST00000329970 QSER1Q2KHR3 1735 aa18.86■□□□□ 0.61
GTF3C6-201ENST00000329970 LY75O60449 1722 aa18.85■□□□□ 0.61
GTF3C6-201ENST00000329970 SPON1Q9HCB6 807 aa18.84■□□□□ 0.61
GTF3C6-201ENST00000329970 EIF4G2P78344 907 aaKnown RBP eCLIP18.83■□□□□ 0.6
GTF3C6-201ENST00000329970 ACSBG1Q96GR2 724 aa18.83■□□□□ 0.6
GTF3C6-201ENST00000329970 PKD1L3Q7Z443 1732 aa18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms