RNA–Protein interactions for RNA: ENST00000329231.8

ATPAF1-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-201ENST00000329231 THRAP3Q9Y2W1 955 aaKnown RBP38.48■■■■□ 3.75
ATPAF1-201ENST00000329231 THSD7AQ9UPZ6 1657 aa38.48■■■■□ 3.75
ATPAF1-201ENST00000329231 COL18A1P39060 1754 aa38.47■■■■□ 3.75
ATPAF1-201ENST00000329231 CRB1P82279 1406 aa38.46■■■■□ 3.75
ATPAF1-201ENST00000329231 OVOS2A0A0J9YW53 1432 aa38.45■■■■□ 3.75
ATPAF1-201ENST00000329231 OVOS2Q6IE36 1432 aa38.45■■■■□ 3.75
ATPAF1-201ENST00000329231 EP400Q96L91 3159 aa38.43■■■■□ 3.74
ATPAF1-201ENST00000329231 HSPA5P11021 654 aaKnown RBP38.42■■■■□ 3.74
ATPAF1-201ENST00000329231 TOM1L2Q6ZVM7 507 aa38.42■■■■□ 3.74
ATPAF1-201ENST00000329231 COG3Q96JB2 828 aa38.42■■■■□ 3.74
ATPAF1-201ENST00000329231 WDR17Q8IZU2 1322 aa38.41■■■■□ 3.74
ATPAF1-201ENST00000329231 BLMP54132 1417 aaPredicted RBP38.41■■■■□ 3.74
ATPAF1-201ENST00000329231 ABCC6O95255 1503 aa38.41■■■■□ 3.74
ATPAF1-201ENST00000329231 CSB-PGBD3P0DP91 1061 aa38.37■■■■□ 3.73
ATPAF1-201ENST00000329231 SF3B2Q13435 895 aaKnown RBP38.36■■■■□ 3.73
ATPAF1-201ENST00000329231 PDE3BQ13370 1112 aa38.33■■■■□ 3.73
ATPAF1-201ENST00000329231 FYB1O15117 783 aa38.32■■■■□ 3.72
ATPAF1-201ENST00000329231 FAM182BQ5T319 152 aa38.32■■■■□ 3.72
ATPAF1-201ENST00000329231 MYOM1P52179 1685 aa38.31■■■■□ 3.72
ATPAF1-201ENST00000329231 POLR3GLQ9BT43 218 aa38.31■■■■□ 3.72
ATPAF1-201ENST00000329231 RGPD5Q99666 1765 aa38.31■■■■□ 3.72
ATPAF1-201ENST00000329231 CARD10Q9BWT7 1032 aa38.3■■■■□ 3.72
ATPAF1-201ENST00000329231 LTN1O94822 1766 aa38.29■■■■□ 3.72
ATPAF1-201ENST00000329231 FAM196AQ6ZSG2 479 aa38.28■■■■□ 3.72
ATPAF1-201ENST00000329231 GGNBP2Q9H3C7 697 aa38.28■■■■□ 3.72
ATPAF1-201ENST00000329231 CARD14Q9BXL6 1004 aa38.27■■■■□ 3.72
ATPAF1-201ENST00000329231 CDCA7Q9BWT1 371 aaPredicted RBP38.26■■■■□ 3.72
ATPAF1-201ENST00000329231 ERBB3P21860 1342 aa38.26■■■■□ 3.72
ATPAF1-201ENST00000329231 NSD3Q9BZ95 1437 aa38.24■■■■□ 3.71
ATPAF1-201ENST00000329231 IP6K1Q92551 441 aa38.24■■■■□ 3.71
ATPAF1-201ENST00000329231 CCDC7Q96M83 1385 aa38.23■■■■□ 3.71
ATPAF1-201ENST00000329231 PARP4Q9UKK3 1724 aaKnown RBP38.23■■■■□ 3.71
ATPAF1-201ENST00000329231 ANKRD24Q8TF21 1146 aa38.22■■■■□ 3.71
ATPAF1-201ENST00000329231 MAP3K19Q56UN5 1328 aa38.21■■■■□ 3.71
ATPAF1-201ENST00000329231 DDB1Q16531 1140 aa38.2■■■■□ 3.71
ATPAF1-201ENST00000329231 DEFB132Q7Z7B7 95 aa38.2■■■■□ 3.71
ATPAF1-201ENST00000329231 NLRP2Q9NX02 1062 aa38.2■■■■□ 3.71
ATPAF1-201ENST00000329231 AMPHP49418 695 aa38.19■■■■□ 3.7
ATPAF1-201ENST00000329231 FBLN1P23142 703 aa38.18■■■■□ 3.7
ATPAF1-201ENST00000329231 BAG6P46379 1132 aa38.18■■■■□ 3.7
ATPAF1-201ENST00000329231 KIF20BQ96Q89 1820 aa38.17■■■■□ 3.7
ATPAF1-201ENST00000329231 C11orf95C9JLR9 678 aaPredicted RBP38.16■■■■□ 3.7
ATPAF1-201ENST00000329231 CGNL1Q0VF96 1302 aa38.15■■■■□ 3.7
ATPAF1-201ENST00000329231 HOXC9P31274 260 aa38.14■■■■□ 3.7
ATPAF1-201ENST00000329231 DISP2A7MBM2 1401 aa38.13■■■■□ 3.7
ATPAF1-201ENST00000329231 RGPD1P0DJD0 1748 aa38.13■■■■□ 3.69
ATPAF1-201ENST00000329231 LRRC37A3O60309 1634 aa38.12■■■■□ 3.69
ATPAF1-201ENST00000329231 RTL1A6NKG5 1358 aa38.12■■■■□ 3.69
ATPAF1-201ENST00000329231 TRIM37O94972 964 aa38.12■■■■□ 3.69
ATPAF1-201ENST00000329231 RRS1Q15050 365 aaKnown RBP38.12■■■■□ 3.69
ATPAF1-201ENST00000329231 WNK3Q9BYP7 1800 aa38.12■■■■□ 3.69
ATPAF1-201ENST00000329231 LTV1Q96GA3 475 aaPredicted RBP38.1■■■■□ 3.69
ATPAF1-201ENST00000329231 OVOS2A0A0G2JMS6 1433 aa38.09■■■■□ 3.69
ATPAF1-201ENST00000329231 EXOC5O00471 708 aa38.08■■■■□ 3.69
ATPAF1-201ENST00000329231 PANK3Q9H999 370 aa38.08■■■■□ 3.69
ATPAF1-201ENST00000329231 IL2RBP14784 551 aa38.05■■■■□ 3.68
ATPAF1-201ENST00000329231 EN1Q05925 392 aaPredicted RBP38.03■■■■□ 3.68
ATPAF1-201ENST00000329231 FAM208AQ9UK61 1670 aaKnown RBP38.02■■■■□ 3.68
ATPAF1-201ENST00000329231 TNS1Q9HBL0 1735 aaKnown RBP38.02■■■■□ 3.68
ATPAF1-201ENST00000329231 MARCH10Q8NA82 808 aaPredicted RBP38.02■■■■□ 3.68
ATPAF1-201ENST00000329231 KIF24Q5T7B8 1368 aa38.02■■■■□ 3.68
ATPAF1-201ENST00000329231 APBA3O96018 575 aa38■■■■□ 3.67
ATPAF1-201ENST00000329231 TNS2Q63HR2 1409 aa38■■■■□ 3.67
ATPAF1-201ENST00000329231 PEAK1Q9H792 1746 aa37.99■■■■□ 3.67
ATPAF1-201ENST00000329231 FLT4P35916 1363 aa37.99■■■■□ 3.67
ATPAF1-201ENST00000329231 KIF7Q2M1P5 1343 aa37.98■■■■□ 3.67
ATPAF1-201ENST00000329231 SMG6Q86US8 1419 aaKnown RBP37.97■■■■□ 3.67
ATPAF1-201ENST00000329231 BCL9O00512 1426 aa37.96■■■■□ 3.67
ATPAF1-201ENST00000329231 INSRP06213 1382 aa37.96■■■■□ 3.67
ATPAF1-201ENST00000329231 HSP90AB2PQ58FF8 381 aa37.95■■■■□ 3.67
ATPAF1-201ENST00000329231 EMILIN1Q9Y6C2 1016 aa37.94■■■■□ 3.66
ATPAF1-201ENST00000329231 CAMKK2Q96RR4 588 aa37.93■■■■□ 3.66
ATPAF1-201ENST00000329231 EZH2Q15910 746 aaKnown RBP37.92■■■■□ 3.66
ATPAF1-201ENST00000329231 NSD2O96028 1365 aa37.92■■■■□ 3.66
ATPAF1-201ENST00000329231 PARD3Q8TEW0 1356 aa37.92■■■■□ 3.66
ATPAF1-201ENST00000329231 PPM1GO15355 546 aaPredicted RBP37.9■■■■□ 3.66
ATPAF1-201ENST00000329231 KNSTRNQ9Y448 316 aa37.9■■■■□ 3.66
ATPAF1-201ENST00000329231 NBPF6Q5VWK0 638 aa37.89■■■■□ 3.66
ATPAF1-201ENST00000329231 NBPF4Q96M43 638 aa37.89■■■■□ 3.66
ATPAF1-201ENST00000329231 BCL11BQ9C0K0 894 aaPredicted RBP37.89■■■■□ 3.66
ATPAF1-201ENST00000329231 ANKRD26Q9UPS8 1709 aa37.87■■■■□ 3.65
ATPAF1-201ENST00000329231 TNNT2P45379 298 aaPredicted RBP37.86■■■■□ 3.65
ATPAF1-201ENST00000329231 SBF2Q86WG5 1849 aa37.85■■■■□ 3.65
ATPAF1-201ENST00000329231 POLKQ9UBT6 870 aa37.85■■■■□ 3.65
ATPAF1-201ENST00000329231 WASHC2AQ641Q2 1341 aa37.84■■■■□ 3.65
ATPAF1-201ENST00000329231 RGPD2P0DJD1 1756 aa37.83■■■■□ 3.65
ATPAF1-201ENST00000329231 USHBP1Q8N6Y0 703 aa37.81■■■■□ 3.64
ATPAF1-201ENST00000329231 MAP2P11137 1827 aaKnown RBP37.8■■■■□ 3.64
ATPAF1-201ENST00000329231 MORC1Q86VD1 984 aa37.8■■■■□ 3.64
ATPAF1-201ENST00000329231 PLSCR1O15162 318 aa37.79■■■■□ 3.64
ATPAF1-201ENST00000329231 PTF1AQ7RTS3 328 aa37.79■■■■□ 3.64
ATPAF1-201ENST00000329231 DDX54Q8TDD1 881 aaKnown RBP37.79■■■■□ 3.64
ATPAF1-201ENST00000329231 RAPGEF4Q8WZA2 1011 aa37.79■■■■□ 3.64
ATPAF1-201ENST00000329231 ZCRB1Q8TBF4 217 aaKnown RBP37.78■■■■□ 3.64
ATPAF1-201ENST00000329231 MEGF6O75095 1541 aa37.77■■■■□ 3.64
ATPAF1-201ENST00000329231 TATP17735 454 aaPredicted RBP37.74■■■■□ 3.63
ATPAF1-201ENST00000329231 AMER1Q5JTC6 1135 aaPredicted RBP37.74■■■■□ 3.63
ATPAF1-201ENST00000329231 ACSBG1Q96GR2 724 aa37.74■■■■□ 3.63
ATPAF1-201ENST00000329231 KCNQ2O43526 872 aa37.73■■■■□ 3.63
ATPAF1-201ENST00000329231 PSDA5PKW4 1024 aaPredicted RBP37.71■■■■□ 3.63
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms