RNA–Protein interactions for RNA: ENST00000329151.5

TMEM54-201, Transcript of transmembrane protein 54, humanhuman

TSL 1 (best) BASIC

Gene TMEM54, Length 871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-201ENST00000329151 OVOS2A0A0J9YW53 1432 aa33.09■■■□□ 2.89
TMEM54-201ENST00000329151 OVOS2Q6IE36 1432 aa33.09■■■□□ 2.89
TMEM54-201ENST00000329151 WDR17Q8IZU2 1322 aa33.07■■■□□ 2.88
TMEM54-201ENST00000329151 TMC1Q8TDI8 760 aa33.06■■■□□ 2.88
TMEM54-201ENST00000329151 COL18A1P39060 1754 aa33.06■■■□□ 2.88
TMEM54-201ENST00000329151 RGPD5Q99666 1765 aa33.06■■■□□ 2.88
TMEM54-201ENST00000329151 CDCA7Q9BWT1 371 aaPredicted RBP33.05■■■□□ 2.88
TMEM54-201ENST00000329151 RREB1Q92766 1687 aa33.04■■■□□ 2.88
TMEM54-201ENST00000329151 ARHGEF25Q86VW2 580 aa33.04■■■□□ 2.88
TMEM54-201ENST00000329151 MON2Q7Z3U7 1717 aa33.04■■■□□ 2.88
TMEM54-201ENST00000329151 SBNO2Q9Y2G9 1366 aa33.04■■■□□ 2.88
TMEM54-201ENST00000329151 LRRC37A3O60309 1634 aa33.03■■■□□ 2.88
TMEM54-201ENST00000329151 SUGP2Q8IX01 1082 aaKnown RBP eCLIP33.03■■■□□ 2.88
TMEM54-201ENST00000329151 WNK3Q9BYP7 1800 aa33.02■■■□□ 2.88
TMEM54-201ENST00000329151 HDGFL2Q7Z4V5 671 aaPredicted RBP33.02■■■□□ 2.88
TMEM54-201ENST00000329151 AXIN2Q9Y2T1 843 aa33.02■■■□□ 2.88
TMEM54-201ENST00000329151 NUP188Q5SRE5 1749 aa33.01■■■□□ 2.87
TMEM54-201ENST00000329151 CARD10Q9BWT7 1032 aa32.98■■■□□ 2.87
TMEM54-201ENST00000329151 SBF2Q86WG5 1849 aa32.98■■■□□ 2.87
TMEM54-201ENST00000329151 PEAK1Q9H792 1746 aa32.95■■■□□ 2.87
TMEM54-201ENST00000329151 TERF2IPQ9NYB0 399 aa32.95■■■□□ 2.87
TMEM54-201ENST00000329151 NFAT5O94916 1531 aa32.95■■■□□ 2.87
TMEM54-201ENST00000329151 CCDC7Q96M83 1385 aa32.94■■■□□ 2.86
TMEM54-201ENST00000329151 ABCC6O95255 1503 aa32.93■■■□□ 2.86
TMEM54-201ENST00000329151 EXOC5O00471 708 aa32.92■■■□□ 2.86
TMEM54-201ENST00000329151 RGPD3A6NKT7 1758 aaPredicted RBP32.91■■■□□ 2.86
TMEM54-201ENST00000329151 RGPD4Q7Z3J3 1758 aa32.91■■■□□ 2.86
TMEM54-201ENST00000329151 BCL11BQ9C0K0 894 aaPredicted RBP32.91■■■□□ 2.86
TMEM54-201ENST00000329151 NME9Q86XW9 330 aa32.9■■■□□ 2.86
TMEM54-201ENST00000329151 LTN1O94822 1766 aa32.9■■■□□ 2.86
TMEM54-201ENST00000329151 USP31Q70CQ4 1352 aa32.89■■■□□ 2.86
TMEM54-201ENST00000329151 MARCH10Q8NA82 808 aaPredicted RBP32.88■■■□□ 2.85
TMEM54-201ENST00000329151 SLC12A5Q9H2X9 1139 aa32.88■■■□□ 2.85
TMEM54-201ENST00000329151 EDC4Q6P2E9 1401 aaKnown RBP32.87■■■□□ 2.85
TMEM54-201ENST00000329151 PLSCR1O15162 318 aa32.87■■■□□ 2.85
TMEM54-201ENST00000329151 NLRP2Q9NX02 1062 aa32.87■■■□□ 2.85
TMEM54-201ENST00000329151 PPP1R1BQ9UD71 204 aaPredicted RBP32.87■■■□□ 2.85
TMEM54-201ENST00000329151 USP54Q70EL1 1684 aa32.87■■■□□ 2.85
TMEM54-201ENST00000329151 SLC24A1O60721 1099 aa32.85■■■□□ 2.85
TMEM54-201ENST00000329151 KAT6BQ8WYB5 2073 aa32.85■■■□□ 2.85
TMEM54-201ENST00000329151 CD163L1Q9NR16 1453 aa32.84■■■□□ 2.85
TMEM54-201ENST00000329151 PUS7Q96PZ0 661 aaKnown RBP32.83■■■□□ 2.85
TMEM54-201ENST00000329151 SPON1Q9HCB6 807 aa32.83■■■□□ 2.85
TMEM54-201ENST00000329151 ERBB3P21860 1342 aa32.81■■■□□ 2.84
TMEM54-201ENST00000329151 A0A1W2PP64 1363 aa32.81■■■□□ 2.84
TMEM54-201ENST00000329151 BCL9O00512 1426 aa32.8■■■□□ 2.84
TMEM54-201ENST00000329151 TNS2Q63HR2 1409 aa32.8■■■□□ 2.84
TMEM54-201ENST00000329151 NINLQ9Y2I6 1382 aa32.79■■■□□ 2.84
TMEM54-201ENST00000329151 ANKRD24Q8TF21 1146 aa32.78■■■□□ 2.84
TMEM54-201ENST00000329151 KCNQ2O43526 872 aa32.77■■■□□ 2.84
TMEM54-201ENST00000329151 IL2RBP14784 551 aa32.77■■■□□ 2.84
TMEM54-201ENST00000329151 ST20-MTHFSA0A0A6YYL1 179 aa32.76■■■□□ 2.83
TMEM54-201ENST00000329151 DCAF8L1A6NGE4 600 aa32.75■■■□□ 2.83
TMEM54-201ENST00000329151 PTF1AQ7RTS3 328 aa32.75■■■□□ 2.83
TMEM54-201ENST00000329151 COG3Q96JB2 828 aa32.73■■■□□ 2.83
TMEM54-201ENST00000329151 TRIM26Q12899 539 aaPredicted RBP32.72■■■□□ 2.83
TMEM54-201ENST00000329151 STK32BQ9NY57 414 aa32.72■■■□□ 2.83
TMEM54-201ENST00000329151 ANO8Q9HCE9 1232 aaPredicted RBP32.7■■■□□ 2.83
TMEM54-201ENST00000329151 TXNRD1Q16881 649 aa32.69■■■□□ 2.82
TMEM54-201ENST00000329151 LTV1Q96GA3 475 aaPredicted RBP32.69■■■□□ 2.82
TMEM54-201ENST00000329151 ACSBG1Q96GR2 724 aa32.69■■■□□ 2.82
TMEM54-201ENST00000329151 NHSQ6T4R5 1651 aa32.69■■■□□ 2.82
TMEM54-201ENST00000329151 FAM208AQ9UK61 1670 aaKnown RBP32.69■■■□□ 2.82
TMEM54-201ENST00000329151 TESK2Q96S53 571 aa32.68■■■□□ 2.82
TMEM54-201ENST00000329151 IP6K1Q92551 441 aa32.67■■■□□ 2.82
TMEM54-201ENST00000329151 AMPHP49418 695 aa32.66■■■□□ 2.82
TMEM54-201ENST00000329151 TMF1P82094 1093 aa32.65■■■□□ 2.82
TMEM54-201ENST00000329151 PROM2Q8N271 834 aa32.64■■■□□ 2.82
TMEM54-201ENST00000329151 CASZ1Q86V15 1759 aa32.62■■■□□ 2.81
TMEM54-201ENST00000329151 ANKRD36BQ8N2N9 1353 aa32.61■■■□□ 2.81
TMEM54-201ENST00000329151 ZBTB7AO95365 584 aa32.6■■■□□ 2.81
TMEM54-201ENST00000329151 SLC15A2Q16348 729 aa32.6■■■□□ 2.81
TMEM54-201ENST00000329151 BTAF1O14981 1849 aa32.6■■■□□ 2.81
TMEM54-201ENST00000329151 USP47Q96K76 1375 aa32.59■■■□□ 2.81
TMEM54-201ENST00000329151 CDCA8Q53HL2 280 aa32.59■■■□□ 2.81
TMEM54-201ENST00000329151 DDX54Q8TDD1 881 aaKnown RBP32.59■■■□□ 2.81
TMEM54-201ENST00000329151 MAP3K19Q56UN5 1328 aa32.57■■■□□ 2.8
TMEM54-201ENST00000329151 HOXC9P31274 260 aa32.55■■■□□ 2.8
TMEM54-201ENST00000329151 ATF5Q9Y2D1 282 aaPredicted RBP32.54■■■□□ 2.8
TMEM54-201ENST00000329151 SMG6Q86US8 1419 aaKnown RBP32.52■■■□□ 2.8
TMEM54-201ENST00000329151 PDGFDQ9GZP0 370 aaPredicted RBP32.52■■■□□ 2.8
TMEM54-201ENST00000329151 RTL1A6NKG5 1358 aa32.51■■■□□ 2.79
TMEM54-201ENST00000329151 SYTL4Q96C24 671 aaPredicted RBP32.51■■■□□ 2.79
TMEM54-201ENST00000329151 YY1P25490 414 aa32.5■■■□□ 2.79
TMEM54-201ENST00000329151 MTFR1LQ9H019 292 aa32.49■■■□□ 2.79
TMEM54-201ENST00000329151 GGNBP2Q9H3C7 697 aa32.49■■■□□ 2.79
TMEM54-201ENST00000329151 RGPD2P0DJD1 1756 aa32.49■■■□□ 2.79
TMEM54-201ENST00000329151 FBLN1P23142 703 aa32.48■■■□□ 2.79
TMEM54-201ENST00000329151 KIF20BQ96Q89 1820 aa32.48■■■□□ 2.79
TMEM54-201ENST00000329151 RRS1Q15050 365 aaKnown RBP32.47■■■□□ 2.79
TMEM54-201ENST00000329151 MYOM1P52179 1685 aa32.46■■■□□ 2.79
TMEM54-201ENST00000329151 ZCRB1Q8TBF4 217 aaKnown RBP32.46■■■□□ 2.79
TMEM54-201ENST00000329151 FYB1O15117 783 aa32.45■■■□□ 2.79
TMEM54-201ENST00000329151 SLC27A3Q5K4L6 730 aa32.43■■■□□ 2.78
TMEM54-201ENST00000329151 RAPGEF4Q8WZA2 1011 aa32.43■■■□□ 2.78
TMEM54-201ENST00000329151 DOT1LQ8TEK3 1739 aa32.43■■■□□ 2.78
TMEM54-201ENST00000329151 PTGER2P43116 358 aa32.41■■■□□ 2.78
TMEM54-201ENST00000329151 PAPPAQ13219 1627 aa32.4■■■□□ 2.78
TMEM54-201ENST00000329151 PRIM1P49642 420 aaKnown RBP32.4■■■□□ 2.78
TMEM54-201ENST00000329151 CGNL1Q0VF96 1302 aa32.39■■■□□ 2.78
Retrieved 100 of 20,778 RNA–protein pairs in 155.7 ms