RNA–Protein interactions for RNA: ENST00000326335.8

CUL4A-201, Transcript of cullin 4A, humanhuman

TSL 1 (best) BASIC

Gene CUL4A, Length 3,705 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-201ENST00000326335 IFT172Q9UG01 1749 aa13.44□□□□□ -0.26
CUL4A-201ENST00000326335 GZF1Q9H116 711 aaPredicted RBP13.44□□□□□ -0.26
CUL4A-201ENST00000326335 TSPYL4Q9UJ04 414 aa13.44□□□□□ -0.26
CUL4A-201ENST00000326335 DIP2BQ9P265 1576 aa13.44□□□□□ -0.26
CUL4A-201ENST00000326335 VAMP4O75379 141 aa13.43□□□□□ -0.26
CUL4A-201ENST00000326335 ANXA1P04083 346 aa13.43□□□□□ -0.26
CUL4A-201ENST00000326335 SLC4A2P04920 1241 aa13.43□□□□□ -0.26
CUL4A-201ENST00000326335 TSHZ3Q63HK5 1081 aa13.43□□□□□ -0.26
CUL4A-201ENST00000326335 ZC3H13Q5T200 1668 aaKnown RBP13.43□□□□□ -0.26
CUL4A-201ENST00000326335 TMEM131LA2VDJ0 1609 aa13.43□□□□□ -0.26
CUL4A-201ENST00000326335 GNAI1P63096 354 aa13.43□□□□□ -0.26
CUL4A-201ENST00000326335 TPRNQ4KMQ1 711 aa13.43□□□□□ -0.26
CUL4A-201ENST00000326335 TMEM2Q9UHN6 1383 aa13.43□□□□□ -0.26
CUL4A-201ENST00000326335 MAP3K19Q56UN5 1328 aa13.43□□□□□ -0.26
CUL4A-201ENST00000326335 NFKBIBQ15653 356 aa13.43□□□□□ -0.26
CUL4A-201ENST00000326335 SETBP1Q9Y6X0 1596 aa13.43□□□□□ -0.26
CUL4A-201ENST00000326335 C16orf71Q8IYS4 520 aaPredicted RBP13.42□□□□□ -0.26
CUL4A-201ENST00000326335 PHF23Q9BUL5 403 aaPredicted RBP13.42□□□□□ -0.26
CUL4A-201ENST00000326335 KIAA1210Q9ULL0 1709 aa13.42□□□□□ -0.26
CUL4A-201ENST00000326335 NSD2O96028 1365 aa13.42□□□□□ -0.26
CUL4A-201ENST00000326335 PSME1Q06323 249 aa13.42□□□□□ -0.26
CUL4A-201ENST00000326335 CCDC27Q2M243 656 aa13.42□□□□□ -0.26
CUL4A-201ENST00000326335 NGEFQ8N5V2 710 aa13.42□□□□□ -0.26
CUL4A-201ENST00000326335 LRRC59Q96AG4 307 aaKnown RBP13.41□□□□□ -0.26
CUL4A-201ENST00000326335 HSP90AA1P07900 732 aaKnown RBP13.41□□□□□ -0.26
CUL4A-201ENST00000326335 MTHFSDQ2M296 383 aaKnown RBP13.41□□□□□ -0.26
CUL4A-201ENST00000326335 ARHGEF40Q8TER5 1519 aa13.4□□□□□ -0.26
CUL4A-201ENST00000326335 G2E3Q7L622 706 aa13.4□□□□□ -0.26
CUL4A-201ENST00000326335 CPS1P31327 1500 aa13.4□□□□□ -0.26
CUL4A-201ENST00000326335 THEMISQ8N1K5 641 aaPredicted RBP13.4□□□□□ -0.26
CUL4A-201ENST00000326335 KIF16BQ96L93 1317 aa13.4□□□□□ -0.26
CUL4A-201ENST00000326335 ZNF692Q9BU19 519 aaPredicted RBP13.39□□□□□ -0.27
CUL4A-201ENST00000326335 ZC3H6P61129 1189 aaKnown RBP13.39□□□□□ -0.27
CUL4A-201ENST00000326335 EYA1Q99502 592 aa13.39□□□□□ -0.27
CUL4A-201ENST00000326335 OTUD7AQ8TE49 926 aaPredicted RBP13.39□□□□□ -0.27
CUL4A-201ENST00000326335 FKBP5Q13451 457 aaPredicted RBP13.38□□□□□ -0.27
CUL4A-201ENST00000326335 ORAI2Q96SN7 254 aa13.38□□□□□ -0.27
CUL4A-201ENST00000326335 NOL8Q76FK4 1167 aaKnown RBP13.38□□□□□ -0.27
CUL4A-201ENST00000326335 MRPL50Q8N5N7 158 aaKnown RBP13.38□□□□□ -0.27
CUL4A-201ENST00000326335 ZBTB40Q9NUA8 1239 aa13.37□□□□□ -0.27
CUL4A-201ENST00000326335 CFAP44Q96MT7 982 aa13.37□□□□□ -0.27
CUL4A-201ENST00000326335 PUS7Q96PZ0 661 aaKnown RBP13.37□□□□□ -0.27
CUL4A-201ENST00000326335 MEIS3Q99687 375 aa13.37□□□□□ -0.27
CUL4A-201ENST00000326335 SHPRHQ149N8 1683 aa13.37□□□□□ -0.27
CUL4A-201ENST00000326335 RBM42Q9BTD8 480 aaKnown RBP13.36□□□□□ -0.27
CUL4A-201ENST00000326335 C22orf23Q9BZE7 217 aa13.36□□□□□ -0.27
CUL4A-201ENST00000326335 LRRC7Q96NW7 1537 aa13.35□□□□□ -0.27
CUL4A-201ENST00000326335 IQSEC2Q5JU85 1478 aa13.35□□□□□ -0.27
CUL4A-201ENST00000326335 CABLES1Q8TDN4 633 aa13.35□□□□□ -0.27
CUL4A-201ENST00000326335 EXOC6BQ9Y2D4 811 aa13.35□□□□□ -0.27
CUL4A-201ENST00000326335 ZFYVE9O95405 1425 aa13.35□□□□□ -0.27
CUL4A-201ENST00000326335 NINLQ9Y2I6 1382 aa13.35□□□□□ -0.27
CUL4A-201ENST00000326335 CHD1LQ86WJ1 897 aa13.35□□□□□ -0.27
CUL4A-201ENST00000326335 EDC4Q6P2E9 1401 aaKnown RBP13.35□□□□□ -0.27
CUL4A-201ENST00000326335 CALD1Q05682 793 aaKnown RBP13.35□□□□□ -0.27
CUL4A-201ENST00000326335 MPRIPQ6WCQ1 1025 aa13.35□□□□□ -0.27
CUL4A-201ENST00000326335 MYO3AQ8NEV4 1616 aa13.34□□□□□ -0.27
CUL4A-201ENST00000326335 A0A0G2JS52 829 aa13.34□□□□□ -0.27
CUL4A-201ENST00000326335 BECN1Q14457 450 aa13.34□□□□□ -0.27
CUL4A-201ENST00000326335 IFT57Q9NWB7 429 aa13.34□□□□□ -0.27
CUL4A-201ENST00000326335 PPP6R1Q9UPN7 881 aa13.34□□□□□ -0.27
CUL4A-201ENST00000326335 PIP4K2AP48426 406 aaPredicted RBP13.34□□□□□ -0.27
CUL4A-201ENST00000326335 LMOD3Q0VAK6 560 aa13.34□□□□□ -0.27
CUL4A-201ENST00000326335 FOXD4L5Q5VV16 416 aaPredicted RBP13.34□□□□□ -0.27
CUL4A-201ENST00000326335 IL27Q8NEV9 243 aa13.34□□□□□ -0.27
CUL4A-201ENST00000326335 FOXD4L4Q8WXT5 416 aaPredicted RBP13.34□□□□□ -0.27
CUL4A-201ENST00000326335 MAP2P11137 1827 aaKnown RBP13.34□□□□□ -0.27
CUL4A-201ENST00000326335 USP19O94966 1318 aa13.33□□□□□ -0.28
CUL4A-201ENST00000326335 ZBTB7BO15156 539 aaPredicted RBP13.33□□□□□ -0.28
CUL4A-201ENST00000326335 DTNBO60941 627 aa13.33□□□□□ -0.28
CUL4A-201ENST00000326335 HSPA2P54652 639 aa13.33□□□□□ -0.28
CUL4A-201ENST00000326335 NLRP1Q9C000 1473 aa13.33□□□□□ -0.28
CUL4A-201ENST00000326335 MAP4K4O95819 1239 aaPredicted RBP13.33□□□□□ -0.28
CUL4A-201ENST00000326335 SIRT2Q8IXJ6 389 aa13.33□□□□□ -0.28
CUL4A-201ENST00000326335 TBC1D2Q9BYX2 928 aa13.33□□□□□ -0.28
CUL4A-201ENST00000326335 STK31Q9BXU1 1019 aa13.32□□□□□ -0.28
CUL4A-201ENST00000326335 PTPRUQ92729 1446 aa13.32□□□□□ -0.28
CUL4A-201ENST00000326335 AIMP1Q12904 312 aaKnown RBP13.32□□□□□ -0.28
CUL4A-201ENST00000326335 PHF8Q9UPP1 1060 aa13.32□□□□□ -0.28
CUL4A-201ENST00000326335 CCDC9Q9Y3X0 531 aaKnown RBP13.32□□□□□ -0.28
CUL4A-201ENST00000326335 LGR6Q9HBX8 967 aa13.31□□□□□ -0.28
CUL4A-201ENST00000326335 KCNQ3O43525 872 aa13.31□□□□□ -0.28
CUL4A-201ENST00000326335 ANKLE2Q86XL3 938 aa13.31□□□□□ -0.28
CUL4A-201ENST00000326335 BRPF3Q9ULD4 1205 aa13.3□□□□□ -0.28
CUL4A-201ENST00000326335 FOXD4L6Q3SYB3 417 aaPredicted RBP13.3□□□□□ -0.28
CUL4A-201ENST00000326335 FOXD4L3Q6VB84 417 aaPredicted RBP13.3□□□□□ -0.28
CUL4A-201ENST00000326335 PROSER2Q86WR7 435 aaPredicted RBP13.3□□□□□ -0.28
CUL4A-201ENST00000326335 IL1RAPL2Q9NP60 686 aa13.3□□□□□ -0.28
CUL4A-201ENST00000326335 CSB-PGBD3P0DP91 1061 aa13.3□□□□□ -0.28
CUL4A-201ENST00000326335 CHRNA2Q15822 529 aa13.3□□□□□ -0.28
CUL4A-201ENST00000326335 ADAMTS13Q76LX8 1427 aa13.3□□□□□ -0.28
CUL4A-201ENST00000326335 HSP90AB1P08238 724 aaKnown RBP13.29□□□□□ -0.28
CUL4A-201ENST00000326335 JARID2Q92833 1246 aaPredicted RBP13.29□□□□□ -0.28
CUL4A-201ENST00000326335 PHAXQ9H814 394 aaKnown RBP13.29□□□□□ -0.28
CUL4A-201ENST00000326335 USP35Q9P2H5 1018 aa13.29□□□□□ -0.28
CUL4A-201ENST00000326335 FAM135BQ49AJ0 1406 aa13.29□□□□□ -0.28
CUL4A-201ENST00000326335 API5Q9BZZ5 524 aaKnown RBP13.29□□□□□ -0.28
CUL4A-201ENST00000326335 COL3A1P02461 1466 aaPredicted RBP13.29□□□□□ -0.28
CUL4A-201ENST00000326335 PNPLA6Q8IY17 1366 aa13.29□□□□□ -0.28
CUL4A-201ENST00000326335 RILPL2Q969X0 211 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms