RNA–Protein interactions for RNA: ENST00000323418.10

ME3-201, Transcript of malic enzyme 3, humanhuman

TSL 5 BASIC

Gene ME3, Length 1,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ME3-201ENST00000323418 USP31Q70CQ4 1352 aa30.14■■■□□ 2.41
ME3-201ENST00000323418 ZBTB7CA1YPR0 619 aa30.12■■■□□ 2.41
ME3-201ENST00000323418 NUP188Q5SRE5 1749 aa30.12■■■□□ 2.41
ME3-201ENST00000323418 KCNH5Q8NCM2 988 aa30.11■■■□□ 2.41
ME3-201ENST00000323418 TRIM37O94972 964 aa30.1■■■□□ 2.41
ME3-201ENST00000323418 TESK2Q96S53 571 aa30.1■■■□□ 2.41
ME3-201ENST00000323418 WDR17Q8IZU2 1322 aa30.1■■■□□ 2.41
ME3-201ENST00000323418 PDE3BQ13370 1112 aa30.09■■■□□ 2.41
ME3-201ENST00000323418 PUS7Q96PZ0 661 aaKnown RBP30.08■■■□□ 2.41
ME3-201ENST00000323418 EDC4Q6P2E9 1401 aaKnown RBP30.07■■■□□ 2.4
ME3-201ENST00000323418 A0A1W2PP64 1363 aa30.07■■■□□ 2.4
ME3-201ENST00000323418 CAMKK2Q96RR4 588 aa30.07■■■□□ 2.4
ME3-201ENST00000323418 RGPD3A6NKT7 1758 aaPredicted RBP30.06■■■□□ 2.4
ME3-201ENST00000323418 RGPD4Q7Z3J3 1758 aa30.06■■■□□ 2.4
ME3-201ENST00000323418 EZH2Q15910 746 aaKnown RBP30.06■■■□□ 2.4
ME3-201ENST00000323418 SLC12A5Q9H2X9 1139 aa30.06■■■□□ 2.4
ME3-201ENST00000323418 SOX12O15370 315 aa30.04■■■□□ 2.4
ME3-201ENST00000323418 NME9Q86XW9 330 aa30.04■■■□□ 2.4
ME3-201ENST00000323418 SUGP2Q8IX01 1082 aaKnown RBP eCLIP30.04■■■□□ 2.4
ME3-201ENST00000323418 OVOS2A0A0J9YW53 1432 aa30.04■■■□□ 2.4
ME3-201ENST00000323418 OVOS2Q6IE36 1432 aa30.04■■■□□ 2.4
ME3-201ENST00000323418 TOM1L2Q6ZVM7 507 aa30.03■■■□□ 2.4
ME3-201ENST00000323418 OVOS2A0A0G2JMS6 1433 aa30.03■■■□□ 2.4
ME3-201ENST00000323418 PARD3Q8TEW0 1356 aa30.03■■■□□ 2.4
ME3-201ENST00000323418 PSDA5PKW4 1024 aaPredicted RBP30.02■■■□□ 2.4
ME3-201ENST00000323418 ST20-MTHFSA0A0A6YYL1 179 aa30.01■■■□□ 2.39
ME3-201ENST00000323418 TMC1Q8TDI8 760 aa30.01■■■□□ 2.39
ME3-201ENST00000323418 APBA3O96018 575 aa29.99■■■□□ 2.39
ME3-201ENST00000323418 HDGFL2Q7Z4V5 671 aaPredicted RBP29.99■■■□□ 2.39
ME3-201ENST00000323418 CARD10Q9BWT7 1032 aa29.99■■■□□ 2.39
ME3-201ENST00000323418 NINLQ9Y2I6 1382 aa29.98■■■□□ 2.39
ME3-201ENST00000323418 BCL9O00512 1426 aa29.96■■■□□ 2.39
ME3-201ENST00000323418 DDB1Q16531 1140 aa29.95■■■□□ 2.39
ME3-201ENST00000323418 TERF2IPQ9NYB0 399 aa29.95■■■□□ 2.39
ME3-201ENST00000323418 C11orf95C9JLR9 678 aaPredicted RBP29.94■■■□□ 2.38
ME3-201ENST00000323418 CCDC7Q96M83 1385 aa29.93■■■□□ 2.38
ME3-201ENST00000323418 CDCA7Q9BWT1 371 aaPredicted RBP29.93■■■□□ 2.38
ME3-201ENST00000323418 ERBB3P21860 1342 aa29.93■■■□□ 2.38
ME3-201ENST00000323418 USP47Q96K76 1375 aa29.92■■■□□ 2.38
ME3-201ENST00000323418 FAM208AQ9UK61 1670 aaKnown RBP29.92■■■□□ 2.38
ME3-201ENST00000323418 R3HDM1Q15032 1099 aaKnown RBP29.92■■■□□ 2.38
ME3-201ENST00000323418 TNS2Q63HR2 1409 aa29.91■■■□□ 2.38
ME3-201ENST00000323418 MARCH10Q8NA82 808 aaPredicted RBP29.91■■■□□ 2.38
ME3-201ENST00000323418 MYOM1P52179 1685 aa29.91■■■□□ 2.38
ME3-201ENST00000323418 CSB-PGBD3P0DP91 1061 aa29.9■■■□□ 2.38
ME3-201ENST00000323418 NHSQ6T4R5 1651 aa29.88■■■□□ 2.37
ME3-201ENST00000323418 ANKRD36BQ8N2N9 1353 aa29.88■■■□□ 2.37
ME3-201ENST00000323418 PTF1AQ7RTS3 328 aa29.87■■■□□ 2.37
ME3-201ENST00000323418 RGPD2P0DJD1 1756 aa29.86■■■□□ 2.37
ME3-201ENST00000323418 SLC24A1O60721 1099 aa29.86■■■□□ 2.37
ME3-201ENST00000323418 KIF20BQ96Q89 1820 aa29.86■■■□□ 2.37
ME3-201ENST00000323418 BCL11BQ9C0K0 894 aaPredicted RBP29.82■■■□□ 2.36
ME3-201ENST00000323418 PLSCR1O15162 318 aa29.81■■■□□ 2.36
ME3-201ENST00000323418 ANKRD24Q8TF21 1146 aa29.81■■■□□ 2.36
ME3-201ENST00000323418 CASZ1Q86V15 1759 aa29.8■■■□□ 2.36
ME3-201ENST00000323418 EXOC5O00471 708 aa29.79■■■□□ 2.36
ME3-201ENST00000323418 TMF1P82094 1093 aa29.79■■■□□ 2.36
ME3-201ENST00000323418 SHANK3Q9BYB0 1731 aa29.79■■■□□ 2.36
ME3-201ENST00000323418 CLSPNQ9HAW4 1339 aa29.78■■■□□ 2.36
ME3-201ENST00000323418 IP6K1Q92551 441 aa29.78■■■□□ 2.36
ME3-201ENST00000323418 NLRP2Q9NX02 1062 aa29.77■■■□□ 2.36
ME3-201ENST00000323418 TIMELESSQ9UNS1 1208 aa29.77■■■□□ 2.36
ME3-201ENST00000323418 BTAF1O14981 1849 aa29.77■■■□□ 2.36
ME3-201ENST00000323418 MAP3K19Q56UN5 1328 aa29.75■■■□□ 2.35
ME3-201ENST00000323418 IL2RBP14784 551 aa29.74■■■□□ 2.35
ME3-201ENST00000323418 FBLN1P23142 703 aa29.74■■■□□ 2.35
ME3-201ENST00000323418 PROM2Q8N271 834 aa29.74■■■□□ 2.35
ME3-201ENST00000323418 COG3Q96JB2 828 aa29.74■■■□□ 2.35
ME3-201ENST00000323418 NBPF14Q5TI25 921 aa29.73■■■□□ 2.35
ME3-201ENST00000323418 FYB1O15117 783 aa29.71■■■□□ 2.35
ME3-201ENST00000323418 ANO8Q9HCE9 1232 aaPredicted RBP29.71■■■□□ 2.35
ME3-201ENST00000323418 HOXC9P31274 260 aa29.7■■■□□ 2.35
ME3-201ENST00000323418 PAPPAQ13219 1627 aa29.7■■■□□ 2.34
ME3-201ENST00000323418 RTL1A6NKG5 1358 aa29.69■■■□□ 2.34
ME3-201ENST00000323418 KCNQ2O43526 872 aa29.69■■■□□ 2.34
ME3-201ENST00000323418 ANKRD26Q9UPS8 1709 aa29.67■■■□□ 2.34
ME3-201ENST00000323418 KAT6BQ8WYB5 2073 aa29.67■■■□□ 2.34
ME3-201ENST00000323418 DOT1LQ8TEK3 1739 aa29.66■■■□□ 2.34
ME3-201ENST00000323418 GGNBP2Q9H3C7 697 aa29.66■■■□□ 2.34
ME3-201ENST00000323418 CDCA8Q53HL2 280 aa29.65■■■□□ 2.34
ME3-201ENST00000323418 PCGF6Q9BYE7 350 aa29.65■■■□□ 2.34
ME3-201ENST00000323418 LTV1Q96GA3 475 aaPredicted RBP29.64■■■□□ 2.34
ME3-201ENST00000323418 MEGF6O75095 1541 aa29.63■■■□□ 2.33
ME3-201ENST00000323418 CARD14Q9BXL6 1004 aa29.63■■■□□ 2.33
ME3-201ENST00000323418 RRS1Q15050 365 aaKnown RBP29.62■■■□□ 2.33
ME3-201ENST00000323418 TXNRD1Q16881 649 aa29.62■■■□□ 2.33
ME3-201ENST00000323418 ACSBG1Q96GR2 724 aa29.62■■■□□ 2.33
ME3-201ENST00000323418 AMPHP49418 695 aa29.61■■■□□ 2.33
ME3-201ENST00000323418 NSD3Q9BZ95 1437 aa29.6■■■□□ 2.33
ME3-201ENST00000323418 LY75O60449 1722 aa29.57■■■□□ 2.32
ME3-201ENST00000323418 PDGFDQ9GZP0 370 aaPredicted RBP29.57■■■□□ 2.32
ME3-201ENST00000323418 MAP2P11137 1827 aaKnown RBP29.57■■■□□ 2.32
ME3-201ENST00000323418 INSRP06213 1382 aa29.55■■■□□ 2.32
ME3-201ENST00000323418 KIF24Q5T7B8 1368 aa29.55■■■□□ 2.32
ME3-201ENST00000323418 QSER1Q2KHR3 1735 aa29.55■■■□□ 2.32
ME3-201ENST00000323418 NBPF6Q5VWK0 638 aa29.54■■■□□ 2.32
ME3-201ENST00000323418 NBPF4Q96M43 638 aa29.54■■■□□ 2.32
ME3-201ENST00000323418 SPON1Q9HCB6 807 aa29.54■■■□□ 2.32
ME3-201ENST00000323418 FLT4P35916 1363 aa29.52■■■□□ 2.32
ME3-201ENST00000323418 TUBGCP6Q96RT7 1819 aa29.52■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms