RNA–Protein interactions for RNA: ENST00000322535.10

SF3B2-201, Transcript of splicing factor 3b subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B2, Length 2,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-201ENST00000322535 GAS2L3Q86XJ1 694 aa12.85□□□□□ -0.35
SF3B2-201ENST00000322535 KDM2BQ8NHM5 1336 aa12.85□□□□□ -0.35
SF3B2-201ENST00000322535 CLGNO14967 610 aa12.85□□□□□ -0.35
SF3B2-201ENST00000322535 XPCQ01831 940 aaPredicted RBP12.85□□□□□ -0.35
SF3B2-201ENST00000322535 GGNBP2Q9H3C7 697 aa12.85□□□□□ -0.35
SF3B2-201ENST00000322535 USP19O94966 1318 aa12.85□□□□□ -0.35
SF3B2-201ENST00000322535 RALBP1Q15311 655 aa12.85□□□□□ -0.35
SF3B2-201ENST00000322535 AMOTL2Q9Y2J4 779 aa12.85□□□□□ -0.35
SF3B2-201ENST00000322535 HSPA2P54652 639 aa12.84□□□□□ -0.35
SF3B2-201ENST00000322535 TAF3Q5VWG9 929 aa12.84□□□□□ -0.35
SF3B2-201ENST00000322535 TBC1D2Q9BYX2 928 aa12.84□□□□□ -0.35
SF3B2-201ENST00000322535 SETBP1Q9Y6X0 1596 aa12.84□□□□□ -0.35
SF3B2-201ENST00000322535 NSD3Q9BZ95 1437 aa12.84□□□□□ -0.35
SF3B2-201ENST00000322535 PPP2R1AP30153 589 aa12.83□□□□□ -0.36
SF3B2-201ENST00000322535 KCNJ4P48050 445 aa12.83□□□□□ -0.36
SF3B2-201ENST00000322535 UBR1Q8IWV7 1749 aa12.83□□□□□ -0.36
SF3B2-201ENST00000322535 EP400NLQ6ZTU2 488 aa12.83□□□□□ -0.36
SF3B2-201ENST00000322535 ZSCAN30Q86W11 494 aa12.83□□□□□ -0.36
SF3B2-201ENST00000322535 NLRP13Q86W25 1043 aa12.83□□□□□ -0.36
SF3B2-201ENST00000322535 TULP4Q9NRJ4 1543 aa12.83□□□□□ -0.36
SF3B2-201ENST00000322535 ARHGEF28Q8N1W1 1705 aaKnown RBP12.83□□□□□ -0.36
SF3B2-201ENST00000322535 ROBO2Q9HCK4 1378 aa12.83□□□□□ -0.36
SF3B2-201ENST00000322535 PARD3Q8TEW0 1356 aa12.82□□□□□ -0.36
SF3B2-201ENST00000322535 CCDC146Q8IYE0 955 aa12.82□□□□□ -0.36
SF3B2-201ENST00000322535 KDM5AP29375 1690 aaKnown RBP12.81□□□□□ -0.36
SF3B2-201ENST00000322535 MORC1Q86VD1 984 aa12.81□□□□□ -0.36
SF3B2-201ENST00000322535 KCNA6P17658 529 aa12.81□□□□□ -0.36
SF3B2-201ENST00000322535 ZRANB1Q9UGI0 708 aa12.81□□□□□ -0.36
SF3B2-201ENST00000322535 MYOM1P52179 1685 aa12.8□□□□□ -0.36
SF3B2-201ENST00000322535 ADAMTS13Q76LX8 1427 aa12.8□□□□□ -0.36
SF3B2-201ENST00000322535 DYNC1I1O14576 645 aa12.8□□□□□ -0.36
SF3B2-201ENST00000322535 ATP2B3Q16720 1220 aa12.8□□□□□ -0.36
SF3B2-201ENST00000322535 PMFBP1Q8TBY8 1022 aa12.8□□□□□ -0.36
SF3B2-201ENST00000322535 UPF2Q9HAU5 1272 aaKnown RBP12.8□□□□□ -0.36
SF3B2-201ENST00000322535 JARID2Q92833 1246 aaPredicted RBP12.8□□□□□ -0.36
SF3B2-201ENST00000322535 ADAMTS8Q9UP79 889 aa12.8□□□□□ -0.36
SF3B2-201ENST00000322535 NRXN3Q9Y4C0 1643 aa12.79□□□□□ -0.36
SF3B2-201ENST00000322535 LRPPRCP42704 1394 aaKnown RBP12.79□□□□□ -0.36
SF3B2-201ENST00000322535 TSC1Q92574 1164 aa12.79□□□□□ -0.36
SF3B2-201ENST00000322535 DNAJC2Q99543 621 aaKnown RBP12.79□□□□□ -0.36
SF3B2-201ENST00000322535 A0A1W2PP64 1363 aa12.79□□□□□ -0.36
SF3B2-201ENST00000322535 PTPRUQ92729 1446 aa12.79□□□□□ -0.36
SF3B2-201ENST00000322535 NLRP1Q9C000 1473 aa12.78□□□□□ -0.36
SF3B2-201ENST00000322535 WASLO00401 505 aaPredicted RBP12.78□□□□□ -0.36
SF3B2-201ENST00000322535 SLC20A2Q08357 652 aa12.78□□□□□ -0.36
SF3B2-201ENST00000322535 SBNO2Q9Y2G9 1366 aa12.78□□□□□ -0.36
SF3B2-201ENST00000322535 NASPP49321 788 aaPredicted RBP12.78□□□□□ -0.36
SF3B2-201ENST00000322535 ANKLE2Q86XL3 938 aa12.78□□□□□ -0.36
SF3B2-201ENST00000322535 NUDT16Q96DE0 195 aaKnown RBP12.78□□□□□ -0.36
SF3B2-201ENST00000322535 ABCC11Q96J66 1382 aa12.76□□□□□ -0.37
SF3B2-201ENST00000322535 PRR36Q9H6K5 1346 aa12.76□□□□□ -0.37
SF3B2-201ENST00000322535 TRIM6-TRIM34B2RNG4 842 aa12.76□□□□□ -0.37
SF3B2-201ENST00000322535 GRIPAP1Q4V328 841 aa12.76□□□□□ -0.37
SF3B2-201ENST00000322535 TRIM34Q9BYJ4 488 aa12.76□□□□□ -0.37
SF3B2-201ENST00000322535 CHMP5Q9NZZ3 219 aa12.76□□□□□ -0.37
SF3B2-201ENST00000322535 PLEKHG1Q9ULL1 1385 aa12.76□□□□□ -0.37
SF3B2-201ENST00000322535 MTHFSP49914 203 aa12.75□□□□□ -0.37
SF3B2-201ENST00000322535 PDE3BQ13370 1112 aa12.75□□□□□ -0.37
SF3B2-201ENST00000322535 NEUROD2Q15784 382 aa12.75□□□□□ -0.37
SF3B2-201ENST00000322535 BRD4O60885 1362 aaPredicted RBP12.75□□□□□ -0.37
SF3B2-201ENST00000322535 CCDC173Q0VFZ6 552 aa12.75□□□□□ -0.37
SF3B2-201ENST00000322535 ZNF622Q969S3 477 aaKnown RBP eCLIP12.75□□□□□ -0.372e-10■■□□□ 12.2
SF3B2-201ENST00000322535 MYO3AQ8NEV4 1616 aa12.75□□□□□ -0.37
SF3B2-201ENST00000322535 FAM177BA6PVY3 158 aa12.75□□□□□ -0.37
SF3B2-201ENST00000322535 FYB1O15117 783 aa12.75□□□□□ -0.37
SF3B2-201ENST00000322535 WDR43Q15061 677 aaKnown RBP eCLIP12.75□□□□□ -0.371e-6■□□□□ 9.5
SF3B2-201ENST00000322535 NME9Q86XW9 330 aa12.75□□□□□ -0.37
SF3B2-201ENST00000322535 CGNL1Q0VF96 1302 aa12.74□□□□□ -0.37
SF3B2-201ENST00000322535 LOC102724159A0A0B4J2E5 919 aa12.74□□□□□ -0.37
SF3B2-201ENST00000322535 SPDYE4A6NLX3 237 aa12.74□□□□□ -0.37
SF3B2-201ENST00000322535 PWP2Q15269 919 aaKnown RBP12.74□□□□□ -0.37
SF3B2-201ENST00000322535 NUTM2GQ5VZR2 741 aa12.74□□□□□ -0.37
SF3B2-201ENST00000322535 DDX11L8A8MPP1 907 aa12.74□□□□□ -0.37
SF3B2-201ENST00000322535 TERF2IPQ9NYB0 399 aa12.74□□□□□ -0.37
SF3B2-201ENST00000322535 CAPN2P17655 700 aa12.73□□□□□ -0.37
SF3B2-201ENST00000322535 HDGFL2Q7Z4V5 671 aaPredicted RBP12.73□□□□□ -0.37
SF3B2-201ENST00000322535 FOXD4L1Q9NU39 408 aa12.73□□□□□ -0.37
SF3B2-201ENST00000322535 SETD1AO15047 1707 aaKnown RBP12.73□□□□□ -0.37
SF3B2-201ENST00000322535 IGHDP01880 384 aa12.73□□□□□ -0.37
SF3B2-201ENST00000322535 ZNF771Q7L3S4 317 aaPredicted RBP12.73□□□□□ -0.37
SF3B2-201ENST00000322535 CEP170BQ9Y4F5 1589 aaPredicted RBP12.73□□□□□ -0.37
SF3B2-201ENST00000322535 KDM4FA0A1W2PPD8 638 aa12.72□□□□□ -0.37
SF3B2-201ENST00000322535 ANKRD36BQ8N2N9 1353 aa12.72□□□□□ -0.37
SF3B2-201ENST00000322535 RRP7AQ9Y3A4 280 aaKnown RBP12.72□□□□□ -0.37
SF3B2-201ENST00000322535 TBX22Q9Y458 520 aa12.72□□□□□ -0.37
SF3B2-201ENST00000322535 CFAP44Q96MT7 982 aa12.72□□□□□ -0.37
SF3B2-201ENST00000322535 PPIP5K1Q6PFW1 1433 aa12.71□□□□□ -0.37
SF3B2-201ENST00000322535 PTMAP06454 111 aaKnown RBP12.71□□□□□ -0.37
SF3B2-201ENST00000322535 CCDC61Q9Y6R9 512 aa12.71□□□□□ -0.37
SF3B2-201ENST00000322535 ZNF710Q8N1W2 664 aa12.71□□□□□ -0.38
SF3B2-201ENST00000322535 ADAMTSL3P82987 1691 aa12.7□□□□□ -0.38
SF3B2-201ENST00000322535 ATAD2Q6PL18 1390 aa12.7□□□□□ -0.38
SF3B2-201ENST00000322535 RRS1Q15050 365 aaKnown RBP12.7□□□□□ -0.38
SF3B2-201ENST00000322535 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.7□□□□□ -0.38
SF3B2-201ENST00000322535 CD163L1Q9NR16 1453 aa12.69□□□□□ -0.38
SF3B2-201ENST00000322535 U2SURPO15042 1029 aaKnown RBP12.69□□□□□ -0.38
SF3B2-201ENST00000322535 CARD10Q9BWT7 1032 aa12.69□□□□□ -0.38
SF3B2-201ENST00000322535 GEMIN8Q9NWZ8 242 aaKnown RBP12.69□□□□□ -0.38
SF3B2-201ENST00000322535 MFAP1P55081 439 aaKnown RBP12.69□□□□□ -0.38
SF3B2-201ENST00000322535 AXDND1Q5T1B0 1012 aaPredicted RBP12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms