RNA–Protein interactions for RNA: ENST00000321331.11

HIGD1A-201, Transcript of HIG1 hypoxia inducible domain family member 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HIGD1A, Length 1,373 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIGD1A-201ENST00000321331 A0A0G2JS52 829 aa27.41■■□□□ 1.98
HIGD1A-201ENST00000321331 MYT1Q01538 1121 aa27.41■■□□□ 1.98
HIGD1A-201ENST00000321331 LARP1Q6PKG0 1096 aaKnown RBP27.41■■□□□ 1.98
HIGD1A-201ENST00000321331 ABCC6O95255 1503 aa27.41■■□□□ 1.98
HIGD1A-201ENST00000321331 GGNBP2Q9H3C7 697 aa27.4■■□□□ 1.98
HIGD1A-201ENST00000321331 KIF20BQ96Q89 1820 aa27.4■■□□□ 1.98
HIGD1A-201ENST00000321331 AXIN2Q9Y2T1 843 aa27.39■■□□□ 1.98
HIGD1A-201ENST00000321331 USP35Q9P2H5 1018 aa27.38■■□□□ 1.97
HIGD1A-201ENST00000321331 LTN1O94822 1766 aa27.38■■□□□ 1.97
HIGD1A-201ENST00000321331 CRB1P82279 1406 aa27.37■■□□□ 1.97
HIGD1A-201ENST00000321331 CGNL1Q0VF96 1302 aa27.36■■□□□ 1.97
HIGD1A-201ENST00000321331 KIF7Q2M1P5 1343 aa27.36■■□□□ 1.97
HIGD1A-201ENST00000321331 TCP11L2Q8N4U5 519 aa27.35■■□□□ 1.97
HIGD1A-201ENST00000321331 WDR17Q8IZU2 1322 aa27.35■■□□□ 1.97
HIGD1A-201ENST00000321331 TOM1L2Q6ZVM7 507 aa27.35■■□□□ 1.97
HIGD1A-201ENST00000321331 PANK3Q9H999 370 aa27.35■■□□□ 1.97
HIGD1A-201ENST00000321331 THRAP3Q9Y2W1 955 aaKnown RBP27.35■■□□□ 1.97
HIGD1A-201ENST00000321331 RGPD5Q99666 1765 aa27.34■■□□□ 1.97
HIGD1A-201ENST00000321331 BRWD3Q6RI45 1802 aa27.34■■□□□ 1.97
HIGD1A-201ENST00000321331 CSB-PGBD3P0DP91 1061 aa27.34■■□□□ 1.97
HIGD1A-201ENST00000321331 BARGINQ6ZT62 677 aa27.34■■□□□ 1.97
HIGD1A-201ENST00000321331 UPF1Q92900 1129 aaKnown RBP eCLIP27.34■■□□□ 1.976e-16■■■■□ 24.3
HIGD1A-201ENST00000321331 KRT27Q7Z3Y8 459 aa27.32■■□□□ 1.96
HIGD1A-201ENST00000321331 THSD7AQ9UPZ6 1657 aa27.32■■□□□ 1.96
HIGD1A-201ENST00000321331 BLMP54132 1417 aaPredicted RBP27.3■■□□□ 1.96
HIGD1A-201ENST00000321331 MAP3K19Q56UN5 1328 aa27.29■■□□□ 1.96
HIGD1A-201ENST00000321331 AMPHP49418 695 aa27.29■■□□□ 1.96
HIGD1A-201ENST00000321331 IP6K1Q92551 441 aa27.29■■□□□ 1.96
HIGD1A-201ENST00000321331 ERBB3P21860 1342 aa27.28■■□□□ 1.96
HIGD1A-201ENST00000321331 FBLN1P23142 703 aa27.27■■□□□ 1.96
HIGD1A-201ENST00000321331 CARD10Q9BWT7 1032 aa27.26■■□□□ 1.95
HIGD1A-201ENST00000321331 ANKRD24Q8TF21 1146 aa27.25■■□□□ 1.95
HIGD1A-201ENST00000321331 RTL1A6NKG5 1358 aa27.25■■□□□ 1.95
HIGD1A-201ENST00000321331 CCDC7Q96M83 1385 aa27.25■■□□□ 1.95
HIGD1A-201ENST00000321331 RRS1Q15050 365 aaKnown RBP27.24■■□□□ 1.95
HIGD1A-201ENST00000321331 KNSTRNQ9Y448 316 aa27.24■■□□□ 1.95
HIGD1A-201ENST00000321331 HOXC9P31274 260 aa27.23■■□□□ 1.95
HIGD1A-201ENST00000321331 WASHC2AQ641Q2 1341 aa27.22■■□□□ 1.95
HIGD1A-201ENST00000321331 NSD2O96028 1365 aa27.22■■□□□ 1.95
HIGD1A-201ENST00000321331 PDE3BQ13370 1112 aa27.22■■□□□ 1.95
HIGD1A-201ENST00000321331 CDCA7Q9BWT1 371 aaPredicted RBP27.22■■□□□ 1.95
HIGD1A-201ENST00000321331 NLRP2Q9NX02 1062 aa27.22■■□□□ 1.95
HIGD1A-201ENST00000321331 ANKRD26Q9UPS8 1709 aa27.21■■□□□ 1.95
HIGD1A-201ENST00000321331 KIF24Q5T7B8 1368 aa27.21■■□□□ 1.95
HIGD1A-201ENST00000321331 EP400Q96L91 3159 aa27.2■■□□□ 1.95
HIGD1A-201ENST00000321331 CCDC125Q86Z20 511 aa27.2■■□□□ 1.94
HIGD1A-201ENST00000321331 PARP4Q9UKK3 1724 aaKnown RBP27.2■■□□□ 1.94
HIGD1A-201ENST00000321331 LTV1Q96GA3 475 aaPredicted RBP27.19■■□□□ 1.94
HIGD1A-201ENST00000321331 FAM208AQ9UK61 1670 aaKnown RBP27.17■■□□□ 1.94
HIGD1A-201ENST00000321331 FLT4P35916 1363 aa27.17■■□□□ 1.94
HIGD1A-201ENST00000321331 WNK3Q9BYP7 1800 aa27.17■■□□□ 1.94
HIGD1A-201ENST00000321331 DDB1Q16531 1140 aa27.16■■□□□ 1.94
HIGD1A-201ENST00000321331 SMG6Q86US8 1419 aaKnown RBP27.15■■□□□ 1.94
HIGD1A-201ENST00000321331 FAM182BQ5T319 152 aa27.14■■□□□ 1.94
HIGD1A-201ENST00000321331 EMILIN1Q9Y6C2 1016 aa27.14■■□□□ 1.94
HIGD1A-201ENST00000321331 INSRP06213 1382 aa27.14■■□□□ 1.93
HIGD1A-201ENST00000321331 MORC1Q86VD1 984 aa27.13■■□□□ 1.93
HIGD1A-201ENST00000321331 DISP2A7MBM2 1401 aa27.13■■□□□ 1.93
HIGD1A-201ENST00000321331 LRRC37A3O60309 1634 aa27.12■■□□□ 1.93
HIGD1A-201ENST00000321331 PPM1GO15355 546 aaPredicted RBP27.12■■□□□ 1.93
HIGD1A-201ENST00000321331 TNNT2P45379 298 aaPredicted RBP27.12■■□□□ 1.93
HIGD1A-201ENST00000321331 SF3B2Q13435 895 aaKnown RBP27.12■■□□□ 1.93
HIGD1A-201ENST00000321331 HSP90AB2PQ58FF8 381 aa27.12■■□□□ 1.93
HIGD1A-201ENST00000321331 FAM196AQ6ZSG2 479 aa27.12■■□□□ 1.93
HIGD1A-201ENST00000321331 PEAK1Q9H792 1746 aa27.12■■□□□ 1.93
HIGD1A-201ENST00000321331 MAP2P11137 1827 aaKnown RBP27.12■■□□□ 1.93
HIGD1A-201ENST00000321331 PER1O15534 1290 aaPredicted RBP27.1■■□□□ 1.93
HIGD1A-201ENST00000321331 IL2RBP14784 551 aa27.1■■□□□ 1.93
HIGD1A-201ENST00000321331 ZEB1P37275 1124 aaPredicted RBP27.1■■□□□ 1.93
HIGD1A-201ENST00000321331 AMER1Q5JTC6 1135 aaPredicted RBP27.1■■□□□ 1.93
HIGD1A-201ENST00000321331 POLKQ9UBT6 870 aa27.09■■□□□ 1.93
HIGD1A-201ENST00000321331 EXOC5O00471 708 aa27.09■■□□□ 1.93
HIGD1A-201ENST00000321331 OVOS2A0A0G2JMS6 1433 aa27.06■■□□□ 1.92
HIGD1A-201ENST00000321331 RGPD2P0DJD1 1756 aa27.04■■□□□ 1.92
HIGD1A-201ENST00000321331 NBPF6Q5VWK0 638 aa27.04■■□□□ 1.92
HIGD1A-201ENST00000321331 NBPF4Q96M43 638 aa27.04■■□□□ 1.92
HIGD1A-201ENST00000321331 TNS2Q63HR2 1409 aa27.04■■□□□ 1.92
HIGD1A-201ENST00000321331 RGPD1P0DJD0 1748 aa27.04■■□□□ 1.92
HIGD1A-201ENST00000321331 CC2D1BQ5T0F9 858 aaKnown RBP27.01■■□□□ 1.91
HIGD1A-201ENST00000321331 NPC1L1Q9UHC9 1359 aa27.01■■□□□ 1.91
HIGD1A-201ENST00000321331 TRIM37O94972 964 aa27■■□□□ 1.91
HIGD1A-201ENST00000321331 BAG6P46379 1132 aa27■■□□□ 1.91
HIGD1A-201ENST00000321331 MARCH10Q8NA82 808 aaPredicted RBP27■■□□□ 1.91
HIGD1A-201ENST00000321331 USHBP1Q8N6Y0 703 aa26.98■■□□□ 1.91
HIGD1A-201ENST00000321331 DEFB132Q7Z7B7 95 aa26.97■■□□□ 1.91
HIGD1A-201ENST00000321331 RAPGEF4Q8WZA2 1011 aa26.97■■□□□ 1.91
HIGD1A-201ENST00000321331 BCL9O00512 1426 aa26.96■■□□□ 1.91
HIGD1A-201ENST00000321331 TNS1Q9HBL0 1735 aaKnown RBP26.96■■□□□ 1.91
HIGD1A-201ENST00000321331 TATP17735 454 aaPredicted RBP26.95■■□□□ 1.9
HIGD1A-201ENST00000321331 MEGF6O75095 1541 aa26.94■■□□□ 1.9
HIGD1A-201ENST00000321331 CNGB1Q14028 1251 aaPredicted RBP26.94■■□□□ 1.9
HIGD1A-201ENST00000321331 EIF4A2Q14240 407 aaKnown RBP26.94■■□□□ 1.9
HIGD1A-201ENST00000321331 APBA3O96018 575 aa26.92■■□□□ 1.9
HIGD1A-201ENST00000321331 ZCRB1Q8TBF4 217 aaKnown RBP26.92■■□□□ 1.9
HIGD1A-201ENST00000321331 EYA1Q99502 592 aa26.92■■□□□ 1.9
HIGD1A-201ENST00000321331 SBF2Q86WG5 1849 aa26.91■■□□□ 1.9
HIGD1A-201ENST00000321331 DDX54Q8TDD1 881 aaKnown RBP26.91■■□□□ 1.9
HIGD1A-201ENST00000321331 NCAPD2Q15021 1401 aa26.91■■□□□ 1.9
HIGD1A-201ENST00000321331 MTHFSP49914 203 aa26.89■■□□□ 1.9
HIGD1A-201ENST00000321331 EN1Q05925 392 aaPredicted RBP26.89■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms