RNA–Protein interactions for RNA: ENST00000319980.10

IFT88-201, Transcript of intraflagellar transport 88, humanhuman

TSL 1 (best) BASIC

Gene IFT88, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-201ENST00000319980 MS4A1P11836 297 aa9.74□□□□□ -0.85
IFT88-201ENST00000319980 IL16Q14005 1332 aa9.74□□□□□ -0.85
IFT88-201ENST00000319980 XIRP1Q702N8 1843 aaKnown RBP9.74□□□□□ -0.85
IFT88-201ENST00000319980 CT47B1P0C2W7 299 aaPredicted RBP9.74□□□□□ -0.85
IFT88-201ENST00000319980 NFE2L2Q16236 605 aa9.74□□□□□ -0.85
IFT88-201ENST00000319980 THUMPD2Q9BTF0 503 aaKnown RBP9.74□□□□□ -0.85
IFT88-201ENST00000319980 SMC4Q9NTJ3 1288 aa9.74□□□□□ -0.85
IFT88-201ENST00000319980 USP6P35125 1406 aa9.74□□□□□ -0.85
IFT88-201ENST00000319980 IGHDP01880 384 aa9.73□□□□□ -0.85
IFT88-201ENST00000319980 ANKLE2Q86XL3 938 aa9.73□□□□□ -0.85
IFT88-201ENST00000319980 PTCH1Q13635 1447 aa9.73□□□□□ -0.85
IFT88-201ENST00000319980 CDK12Q9NYV4 1490 aaPredicted RBP9.73□□□□□ -0.85
IFT88-201ENST00000319980 LRRC7Q96NW7 1537 aa9.73□□□□□ -0.85
IFT88-201ENST00000319980 NPHP4O75161 1426 aaPredicted RBP9.73□□□□□ -0.85
IFT88-201ENST00000319980 SSH1Q8WYL5 1049 aa9.73□□□□□ -0.85
IFT88-201ENST00000319980 HSP90AB2PQ58FF8 381 aa9.72□□□□□ -0.85
IFT88-201ENST00000319980 ZKSCAN2Q63HK3 967 aa9.72□□□□□ -0.85
IFT88-201ENST00000319980 RBM33Q96EV2 1170 aaKnown RBP9.72□□□□□ -0.85
IFT88-201ENST00000319980 BACH2Q9BYV9 841 aa9.72□□□□□ -0.85
IFT88-201ENST00000319980 ANP32AP39687 249 aaKnown RBP9.72□□□□□ -0.85
IFT88-201ENST00000319980 EIF4A2Q14240 407 aaKnown RBP9.72□□□□□ -0.85
IFT88-201ENST00000319980 FTSJ3Q8IY81 847 aaKnown RBP9.72□□□□□ -0.85
IFT88-201ENST00000319980 MAP2P11137 1827 aaKnown RBP9.72□□□□□ -0.85
IFT88-201ENST00000319980 RGS3P49796 1198 aa9.71□□□□□ -0.85
IFT88-201ENST00000319980 SULT6B1Q6IMI4 303 aa9.71□□□□□ -0.85
IFT88-201ENST00000319980 DIP2AQ14689 1571 aa9.71□□□□□ -0.85
IFT88-201ENST00000319980 AEBP1Q8IUX7 1158 aa9.71□□□□□ -0.85
IFT88-201ENST00000319980 ANP32EQ9BTT0 268 aa9.71□□□□□ -0.85
IFT88-201ENST00000319980 NPM2Q86SE8 214 aaKnown RBP9.71□□□□□ -0.86
IFT88-201ENST00000319980 DZIP1LQ8IYY4 767 aaKnown RBP9.71□□□□□ -0.86
IFT88-201ENST00000319980 MON2Q7Z3U7 1717 aa9.71□□□□□ -0.86
IFT88-201ENST00000319980 OVOS2A0A0J9YW53 1432 aa9.71□□□□□ -0.86
IFT88-201ENST00000319980 OVOS2Q6IE36 1432 aa9.71□□□□□ -0.86
IFT88-201ENST00000319980 ERICH6Q7L0X2 663 aa9.7□□□□□ -0.86
IFT88-201ENST00000319980 TTC21AQ8NDW8 1320 aa9.7□□□□□ -0.86
IFT88-201ENST00000319980 FAM83GA6ND36 823 aa9.7□□□□□ -0.86
IFT88-201ENST00000319980 TRIM27P14373 513 aa9.7□□□□□ -0.86
IFT88-201ENST00000319980 CALD1Q05682 793 aaKnown RBP9.7□□□□□ -0.86
IFT88-201ENST00000319980 NOB1Q9ULX3 412 aaKnown RBP9.7□□□□□ -0.86
IFT88-201ENST00000319980 NLRP6P59044 892 aa9.69□□□□□ -0.86
IFT88-201ENST00000319980 DCTN1Q14203 1278 aa9.69□□□□□ -0.86
IFT88-201ENST00000319980 PCDHB15Q9Y5E8 787 aa9.69□□□□□ -0.86
IFT88-201ENST00000319980 SSH2Q76I76 1423 aa9.69□□□□□ -0.86
IFT88-201ENST00000319980 ELL2O00472 640 aaPredicted RBP9.69□□□□□ -0.86
IFT88-201ENST00000319980 MVPQ14764 893 aaKnown RBP9.69□□□□□ -0.86
IFT88-201ENST00000319980 NUTM2GQ5VZR2 741 aa9.69□□□□□ -0.86
IFT88-201ENST00000319980 PIK3R4Q99570 1358 aa9.69□□□□□ -0.86
IFT88-201ENST00000319980 ITSN1Q15811 1721 aa9.69□□□□□ -0.86
IFT88-201ENST00000319980 MAP3K19Q56UN5 1328 aa9.69□□□□□ -0.86
IFT88-201ENST00000319980 GNAI1P63096 354 aa9.69□□□□□ -0.86
IFT88-201ENST00000319980 LMOD3Q0VAK6 560 aa9.69□□□□□ -0.86
IFT88-201ENST00000319980 AAMPQ13685 434 aa9.69□□□□□ -0.86
IFT88-201ENST00000319980 ATF7IPQ6VMQ6 1270 aa9.69□□□□□ -0.86
IFT88-201ENST00000319980 AKAP12Q02952 1782 aa9.69□□□□□ -0.86
IFT88-201ENST00000319980 PAK3O75914 559 aaPredicted RBP9.68□□□□□ -0.86
IFT88-201ENST00000319980 VSIG10Q8N0Z9 540 aa9.68□□□□□ -0.86
IFT88-201ENST00000319980 FOXD4L1Q9NU39 408 aa9.68□□□□□ -0.86
IFT88-201ENST00000319980 USP31Q70CQ4 1352 aa9.68□□□□□ -0.86
IFT88-201ENST00000319980 CHD2O14647 1828 aaKnown RBP9.68□□□□□ -0.86
IFT88-201ENST00000319980 MBIPQ9NS73 344 aa9.68□□□□□ -0.86
IFT88-201ENST00000319980 IFT57Q9NWB7 429 aa9.68□□□□□ -0.86
IFT88-201ENST00000319980 AMPHP49418 695 aa9.67□□□□□ -0.86
IFT88-201ENST00000319980 ITPRIPQ8IWB1 547 aa9.67□□□□□ -0.86
IFT88-201ENST00000319980 TSPYL6Q8N831 410 aa9.67□□□□□ -0.86
IFT88-201ENST00000319980 IPO8O15397 1037 aaKnown RBP9.67□□□□□ -0.86
IFT88-201ENST00000319980 C14orf37Q86TY3 774 aa9.67□□□□□ -0.86
IFT88-201ENST00000319980 ABTB2Q8N961 1025 aa9.67□□□□□ -0.86
IFT88-201ENST00000319980 CFAP44Q96MT7 982 aa9.67□□□□□ -0.86
IFT88-201ENST00000319980 IPO9Q96P70 1041 aaKnown RBP9.67□□□□□ -0.86
IFT88-201ENST00000319980 KIF16BQ96L93 1317 aa9.67□□□□□ -0.86
IFT88-201ENST00000319980 TOPAZ1Q8N9V7 1692 aa9.67□□□□□ -0.86
IFT88-201ENST00000319980 VAMP4O75379 141 aa9.67□□□□□ -0.86
IFT88-201ENST00000319980 ZNF853P0CG23 659 aa9.67□□□□□ -0.86
IFT88-201ENST00000319980 ALDH1L2Q3SY69 923 aa9.67□□□□□ -0.86
IFT88-201ENST00000319980 NCOA3Q9Y6Q9 1424 aa9.66□□□□□ -0.86
IFT88-201ENST00000319980 NRKQ7Z2Y5 1582 aa9.66□□□□□ -0.86
IFT88-201ENST00000319980 ANKARQ7Z5J8 1434 aa9.65□□□□□ -0.86
IFT88-201ENST00000319980 TMEM57Q8N5G2 664 aa9.65□□□□□ -0.86
IFT88-201ENST00000319980 ZNF428Q96B54 188 aa9.65□□□□□ -0.86
IFT88-201ENST00000319980 RWDD1Q9H446 243 aaPredicted RBP9.65□□□□□ -0.86
IFT88-201ENST00000319980 DDX19BQ9UMR2 479 aa9.65□□□□□ -0.86
IFT88-201ENST00000319980 NOP58Q9Y2X3 529 aaKnown RBP9.65□□□□□ -0.86
IFT88-201ENST00000319980 TWISTNBQ3B726 338 aaPredicted RBP9.65□□□□□ -0.86
IFT88-201ENST00000319980 FAM161AQ3B820 660 aa9.65□□□□□ -0.86
IFT88-201ENST00000319980 MCM10Q7L590 875 aa9.65□□□□□ -0.86
IFT88-201ENST00000319980 PHF8Q9UPP1 1060 aa9.65□□□□□ -0.86
IFT88-201ENST00000319980 FLT4P35916 1363 aa9.65□□□□□ -0.87
IFT88-201ENST00000319980 XRN1Q8IZH2 1706 aaKnown RBP9.64□□□□□ -0.87
IFT88-201ENST00000319980 ESCO1Q5FWF5 840 aa9.64□□□□□ -0.87
IFT88-201ENST00000319980 C8orf58Q8NAV2 365 aa9.64□□□□□ -0.87
IFT88-201ENST00000319980 C8orf34Q49A92 452 aa9.64□□□□□ -0.87
IFT88-201ENST00000319980 ZBTB47Q9UFB7 747 aaPredicted RBP9.64□□□□□ -0.87
IFT88-201ENST00000319980 SBNO1A3KN83 1393 aa9.64□□□□□ -0.87
IFT88-201ENST00000319980 EYA1Q99502 592 aa9.64□□□□□ -0.87
IFT88-201ENST00000319980 ZNF335Q9H4Z2 1342 aaPredicted RBP9.63□□□□□ -0.87
IFT88-201ENST00000319980 FOXO3O43524 673 aa9.63□□□□□ -0.87
IFT88-201ENST00000319980 MRPL50Q8N5N7 158 aaKnown RBP9.63□□□□□ -0.87
IFT88-201ENST00000319980 BRPF1P55201 1214 aaPredicted RBP9.62□□□□□ -0.87
IFT88-201ENST00000319980 PSME1Q06323 249 aa9.62□□□□□ -0.87
IFT88-201ENST00000319980 LTV1Q96GA3 475 aaPredicted RBP9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms