RNA–Protein interactions for RNA: ENST00000319420.3

SHISA2-201, Transcript of shisa family member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA2, Length 2,860 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA2-201ENST00000319420 CEP170BQ9Y4F5 1589 aaPredicted RBP20.46■□□□□ 0.87
SHISA2-201ENST00000319420 PDE3AQ14432 1141 aa20.46■□□□□ 0.87
SHISA2-201ENST00000319420 CENPQQ7L2Z9 268 aaPredicted RBP20.46■□□□□ 0.87
SHISA2-201ENST00000319420 TSPYL6Q8N831 410 aa20.46■□□□□ 0.87
SHISA2-201ENST00000319420 DNAJC5Q9H3Z4 198 aa20.46■□□□□ 0.87
SHISA2-201ENST00000319420 ANKRD26Q9UPS8 1709 aa20.46■□□□□ 0.87
SHISA2-201ENST00000319420 MCM10Q7L590 875 aa20.46■□□□□ 0.87
SHISA2-201ENST00000319420 NOB1Q9ULX3 412 aaKnown RBP20.46■□□□□ 0.87
SHISA2-201ENST00000319420 BACH2Q9BYV9 841 aa20.45■□□□□ 0.86
SHISA2-201ENST00000319420 KNDC1Q76NI1 1749 aa20.45■□□□□ 0.86
SHISA2-201ENST00000319420 ITPRIPQ8IWB1 547 aa20.45■□□□□ 0.86
SHISA2-201ENST00000319420 ZKSCAN2Q63HK3 967 aa20.44■□□□□ 0.86
SHISA2-201ENST00000319420 FOXO3O43524 673 aa20.44■□□□□ 0.86
SHISA2-201ENST00000319420 AATKQ6ZMQ8 1374 aa20.43■□□□□ 0.86
SHISA2-201ENST00000319420 TRIM27P14373 513 aa20.43■□□□□ 0.86
SHISA2-201ENST00000319420 MIS18AQ9NYP9 233 aa20.43■□□□□ 0.86
SHISA2-201ENST00000319420 MS4A1P11836 297 aa20.42■□□□□ 0.86
SHISA2-201ENST00000319420 KRT24Q2M2I5 525 aa20.42■□□□□ 0.86
SHISA2-201ENST00000319420 PCDHB15Q9Y5E8 787 aa20.42■□□□□ 0.86
SHISA2-201ENST00000319420 DZIP1LQ8IYY4 767 aaKnown RBP20.42■□□□□ 0.86
SHISA2-201ENST00000319420 MBIPQ9NS73 344 aa20.41■□□□□ 0.86
SHISA2-201ENST00000319420 ADGRB2O60241 1585 aa20.41■□□□□ 0.86
SHISA2-201ENST00000319420 PSME1Q06323 249 aa20.41■□□□□ 0.86
SHISA2-201ENST00000319420 ORAI2Q96SN7 254 aa20.41■□□□□ 0.86
SHISA2-201ENST00000319420 PHF8Q9UPP1 1060 aa20.41■□□□□ 0.86
SHISA2-201ENST00000319420 DIP2AQ14689 1571 aa20.41■□□□□ 0.86
SHISA2-201ENST00000319420 CDK12Q9NYV4 1490 aaPredicted RBP20.41■□□□□ 0.86
SHISA2-201ENST00000319420 ITSN1Q15811 1721 aa20.4■□□□□ 0.86
SHISA2-201ENST00000319420 ANP32AP39687 249 aaKnown RBP20.4■□□□□ 0.86
SHISA2-201ENST00000319420 USHBP1Q8N6Y0 703 aa20.4■□□□□ 0.86
SHISA2-201ENST00000319420 RGPD8O14715 1765 aaPredicted RBP20.4■□□□□ 0.86
SHISA2-201ENST00000319420 PTCH1Q13635 1447 aa20.4■□□□□ 0.86
SHISA2-201ENST00000319420 OVOS2A0A0J9YW53 1432 aa20.38■□□□□ 0.85
SHISA2-201ENST00000319420 OVOS2Q6IE36 1432 aa20.38■□□□□ 0.85
SHISA2-201ENST00000319420 HSPA2P54652 639 aa20.38■□□□□ 0.85
SHISA2-201ENST00000319420 IPO9Q96P70 1041 aaKnown RBP20.38■□□□□ 0.85
SHISA2-201ENST00000319420 MON2Q7Z3U7 1717 aa20.38■□□□□ 0.85
SHISA2-201ENST00000319420 C8orf58Q8NAV2 365 aa20.38■□□□□ 0.85
SHISA2-201ENST00000319420 NOP58Q9Y2X3 529 aaKnown RBP20.38■□□□□ 0.85
SHISA2-201ENST00000319420 PROSER2Q86WR7 435 aaPredicted RBP20.37■□□□□ 0.85
SHISA2-201ENST00000319420 ATF7IPQ6VMQ6 1270 aa20.36■□□□□ 0.85
SHISA2-201ENST00000319420 TMEM57Q8N5G2 664 aa20.36■□□□□ 0.85
SHISA2-201ENST00000319420 MVPQ14764 893 aaKnown RBP20.36■□□□□ 0.85
SHISA2-201ENST00000319420 TTC21AQ8NDW8 1320 aa20.36■□□□□ 0.85
SHISA2-201ENST00000319420 EYA1Q99502 592 aa20.36■□□□□ 0.85
SHISA2-201ENST00000319420 IL16Q14005 1332 aa20.35■□□□□ 0.85
SHISA2-201ENST00000319420 GNAI1P63096 354 aa20.35■□□□□ 0.85
SHISA2-201ENST00000319420 TWISTNBQ3B726 338 aaPredicted RBP20.34■□□□□ 0.85
SHISA2-201ENST00000319420 AKAP12Q02952 1782 aa20.34■□□□□ 0.85
SHISA2-201ENST00000319420 NCBP3Q53F19 620 aaKnown RBP20.34■□□□□ 0.85
SHISA2-201ENST00000319420 DDX17Q92841 729 aaKnown RBP20.33■□□□□ 0.85
SHISA2-201ENST00000319420 VAMP4O75379 141 aa20.32■□□□□ 0.84
SHISA2-201ENST00000319420 MTHFSDQ2M296 383 aaKnown RBP20.32■□□□□ 0.84
SHISA2-201ENST00000319420 ANO8Q9HCE9 1232 aaPredicted RBP20.32■□□□□ 0.84
SHISA2-201ENST00000319420 C1orf115Q9H7X2 142 aa20.32■□□□□ 0.84
SHISA2-201ENST00000319420 SSH2Q76I76 1423 aa20.32■□□□□ 0.84
SHISA2-201ENST00000319420 CALD1Q05682 793 aaKnown RBP20.32■□□□□ 0.84
SHISA2-201ENST00000319420 LMOD3Q0VAK6 560 aa20.32■□□□□ 0.84
SHISA2-201ENST00000319420 CFAP44Q96MT7 982 aa20.32■□□□□ 0.84
SHISA2-201ENST00000319420 IFT57Q9NWB7 429 aa20.32■□□□□ 0.84
SHISA2-201ENST00000319420 NPHP4O75161 1426 aaPredicted RBP20.3■□□□□ 0.84
SHISA2-201ENST00000319420 FLT4P35916 1363 aa20.3■□□□□ 0.84
SHISA2-201ENST00000319420 HOXC9P31274 260 aa20.3■□□□□ 0.84
SHISA2-201ENST00000319420 RTF1Q92541 710 aaKnown RBP20.3■□□□□ 0.84
SHISA2-201ENST00000319420 CT47B1P0C2W7 299 aaPredicted RBP20.29■□□□□ 0.84
SHISA2-201ENST00000319420 NECTIN2Q92692 538 aa20.29■□□□□ 0.84
SHISA2-201ENST00000319420 USP31Q70CQ4 1352 aa20.29■□□□□ 0.84
SHISA2-201ENST00000319420 ZBTB47Q9UFB7 747 aaPredicted RBP20.29■□□□□ 0.84
SHISA2-201ENST00000319420 SETD1BQ9UPS6 1966 aaKnown RBP20.28■□□□□ 0.84
SHISA2-201ENST00000319420 IPO8O15397 1037 aaKnown RBP20.28■□□□□ 0.84
SHISA2-201ENST00000319420 C8orf34Q49A92 452 aa20.28■□□□□ 0.84
SHISA2-201ENST00000319420 TOPAZ1Q8N9V7 1692 aa20.27■□□□□ 0.84
SHISA2-201ENST00000319420 SBNO1A3KN83 1393 aa20.27■□□□□ 0.84
SHISA2-201ENST00000319420 PIK3R4Q99570 1358 aa20.27■□□□□ 0.84
SHISA2-201ENST00000319420 KIF16BQ96L93 1317 aa20.27■□□□□ 0.84
SHISA2-201ENST00000319420 XRN1Q8IZH2 1706 aaKnown RBP20.26■□□□□ 0.83
SHISA2-201ENST00000319420 PEAK1Q9H792 1746 aa20.26■□□□□ 0.83
SHISA2-201ENST00000319420 ZNF853P0CG23 659 aa20.26■□□□□ 0.83
SHISA2-201ENST00000319420 LRRC59Q96AG4 307 aaKnown RBP20.26■□□□□ 0.83
SHISA2-201ENST00000319420 PDZRN3Q9UPQ7 1066 aa20.25■□□□□ 0.83
SHISA2-201ENST00000319420 NRKQ7Z2Y5 1582 aa20.25■□□□□ 0.83
SHISA2-201ENST00000319420 RWDD1Q9H446 243 aaPredicted RBP20.25■□□□□ 0.83
SHISA2-201ENST00000319420 DDX19BQ9UMR2 479 aa20.25■□□□□ 0.83
SHISA2-201ENST00000319420 MRPL50Q8N5N7 158 aaKnown RBP20.24■□□□□ 0.83
SHISA2-201ENST00000319420 TSPYL4Q9UJ04 414 aa20.24■□□□□ 0.83
SHISA2-201ENST00000319420 FAM161AQ3B820 660 aa20.23■□□□□ 0.83
SHISA2-201ENST00000319420 ADAMTSL3P82987 1691 aa20.22■□□□□ 0.83
SHISA2-201ENST00000319420 ALDH1L2Q3SY69 923 aa20.22■□□□□ 0.83
SHISA2-201ENST00000319420 ANKARQ7Z5J8 1434 aa20.22■□□□□ 0.83
SHISA2-201ENST00000319420 SLC4A3P48751 1232 aa20.22■□□□□ 0.83
SHISA2-201ENST00000319420 ZC3H6P61129 1189 aaKnown RBP20.22■□□□□ 0.83
SHISA2-201ENST00000319420 NBR1Q14596 966 aa20.21■□□□□ 0.83
SHISA2-201ENST00000319420 PIK3C2AO00443 1686 aa20.21■□□□□ 0.83
SHISA2-201ENST00000319420 ADGRL3Q9HAR2 1447 aa20.2■□□□□ 0.82
SHISA2-201ENST00000319420 NBPF6Q5VWK0 638 aa20.2■□□□□ 0.82
SHISA2-201ENST00000319420 NBPF4Q96M43 638 aa20.2■□□□□ 0.82
SHISA2-201ENST00000319420 NALCNQ8IZF0 1738 aa20.2■□□□□ 0.82
SHISA2-201ENST00000319420 IGSF1Q8N6C5 1336 aa20.19■□□□□ 0.82
SHISA2-201ENST00000319420 KRT28Q7Z3Y7 464 aa20.19■□□□□ 0.82
SHISA2-201ENST00000319420 CHL1O00533 1208 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms