RNA–Protein interactions for RNA: ENST00000319410.9

KARS-202, Transcript of lysyl-tRNA synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KARS, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-202ENST00000319410 TMF1P82094 1093 aa13.12□□□□□ -0.31
KARS-202ENST00000319410 CDCA8Q53HL2 280 aa13.12□□□□□ -0.31
KARS-202ENST00000319410 USP35Q9P2H5 1018 aa13.12□□□□□ -0.31
KARS-202ENST00000319410 USP6P35125 1406 aa13.12□□□□□ -0.31
KARS-202ENST00000319410 NRKQ7Z2Y5 1582 aa13.11□□□□□ -0.31
KARS-202ENST00000319410 SPATA31A5Q5VU36 1347 aa13.1□□□□□ -0.31
KARS-202ENST00000319410 SPATA31A7Q8IWB4 1347 aa13.1□□□□□ -0.31
KARS-202ENST00000319410 ONECUT3O60422 494 aaPredicted RBP13.1□□□□□ -0.31
KARS-202ENST00000319410 NLRP6P59044 892 aa13.1□□□□□ -0.31
KARS-202ENST00000319410 KRT27Q7Z3Y8 459 aa13.1□□□□□ -0.31
KARS-202ENST00000319410 BRD4O60885 1362 aaPredicted RBP13.1□□□□□ -0.31
KARS-202ENST00000319410 SOX12O15370 315 aa13.1□□□□□ -0.31
KARS-202ENST00000319410 GCP02774 474 aa13.1□□□□□ -0.31
KARS-202ENST00000319410 HSPA5P11021 654 aaKnown RBP13.1□□□□□ -0.31
KARS-202ENST00000319410 NLRP13Q86W25 1043 aa13.1□□□□□ -0.31
KARS-202ENST00000319410 NINLQ9Y2I6 1382 aa13.1□□□□□ -0.31
KARS-202ENST00000319410 USP19O94966 1318 aa13.09□□□□□ -0.31
KARS-202ENST00000319410 EVA1CP58658 441 aa13.09□□□□□ -0.31
KARS-202ENST00000319410 WASHC2AQ641Q2 1341 aa13.08□□□□□ -0.32
KARS-202ENST00000319410 CAMTA1Q9Y6Y1 1673 aa13.08□□□□□ -0.32
KARS-202ENST00000319410 DEFB132Q7Z7B7 95 aa13.08□□□□□ -0.32
KARS-202ENST00000319410 LARP1Q6PKG0 1096 aaKnown RBP13.08□□□□□ -0.32
KARS-202ENST00000319410 PIK3C2AO00443 1686 aa13.08□□□□□ -0.32
KARS-202ENST00000319410 TMC1Q8TDI8 760 aa13.07□□□□□ -0.32
KARS-202ENST00000319410 SSH2Q76I76 1423 aa13.07□□□□□ -0.32
KARS-202ENST00000319410 SPATA31A1Q5TZJ5 1347 aa13.07□□□□□ -0.32
KARS-202ENST00000319410 ZNF692Q9BU19 519 aaPredicted RBP13.07□□□□□ -0.32
KARS-202ENST00000319410 TTC21BQ7Z4L5 1316 aa13.06□□□□□ -0.32
KARS-202ENST00000319410 ZRANB1Q9UGI0 708 aa13.06□□□□□ -0.32
KARS-202ENST00000319410 RRP9O43818 475 aaKnown RBP13.05□□□□□ -0.32
KARS-202ENST00000319410 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.05□□□□□ -0.32
KARS-202ENST00000319410 BLMP54132 1417 aaPredicted RBP13.05□□□□□ -0.32
KARS-202ENST00000319410 AKAP12Q02952 1782 aa13.05□□□□□ -0.32
KARS-202ENST00000319410 CPDO75976 1380 aa13.05□□□□□ -0.32
KARS-202ENST00000319410 KTN1Q86UP2 1357 aaKnown RBP13.05□□□□□ -0.32
KARS-202ENST00000319410 LMO7Q8WWI1 1683 aa13.05□□□□□ -0.32
KARS-202ENST00000319410 CCDC125Q86Z20 511 aa13.04□□□□□ -0.32
KARS-202ENST00000319410 SLC12A5Q9H2X9 1139 aa13.04□□□□□ -0.32
KARS-202ENST00000319410 CPSF1Q10570 1443 aaKnown RBP13.04□□□□□ -0.32
KARS-202ENST00000319410 THSD7AQ9UPZ6 1657 aa13.04□□□□□ -0.32
KARS-202ENST00000319410 SLIT3O75094 1523 aa13.03□□□□□ -0.32
KARS-202ENST00000319410 SF3B2Q13435 895 aaKnown RBP13.03□□□□□ -0.32
KARS-202ENST00000319410 HSP90AA2PQ14568 343 aaPredicted RBP13.03□□□□□ -0.32
KARS-202ENST00000319410 COL5A2P05997 1499 aaPredicted RBP13.03□□□□□ -0.32
KARS-202ENST00000319410 AXIN2Q9Y2T1 843 aa13.02□□□□□ -0.32
KARS-202ENST00000319410 CD163L1Q9NR16 1453 aa13.02□□□□□ -0.33
KARS-202ENST00000319410 NME9Q86XW9 330 aa13.02□□□□□ -0.33
KARS-202ENST00000319410 FAM43AQ8N2R8 423 aa13.02□□□□□ -0.33
KARS-202ENST00000319410 TERF2IPQ9NYB0 399 aa13.02□□□□□ -0.33
KARS-202ENST00000319410 HDGFL2Q7Z4V5 671 aaPredicted RBP13.01□□□□□ -0.33
KARS-202ENST00000319410 MON2Q7Z3U7 1717 aa13.01□□□□□ -0.33
KARS-202ENST00000319410 TCP11L2Q8N4U5 519 aa13□□□□□ -0.33
KARS-202ENST00000319410 TTC21AQ8NDW8 1320 aa13□□□□□ -0.33
KARS-202ENST00000319410 AATKQ6ZMQ8 1374 aa12.99□□□□□ -0.33
KARS-202ENST00000319410 A0A1W2PP64 1363 aa12.99□□□□□ -0.33
KARS-202ENST00000319410 ANKRD36BQ8N2N9 1353 aa12.99□□□□□ -0.33
KARS-202ENST00000319410 TOM1L2Q6ZVM7 507 aa12.99□□□□□ -0.33
KARS-202ENST00000319410 ARHGEF25Q86VW2 580 aa12.99□□□□□ -0.33
KARS-202ENST00000319410 RGPD5Q99666 1765 aa12.98□□□□□ -0.33
KARS-202ENST00000319410 TRIM37O94972 964 aa12.98□□□□□ -0.33
KARS-202ENST00000319410 EN1Q05925 392 aaPredicted RBP12.98□□□□□ -0.33
KARS-202ENST00000319410 BARGINQ6ZT62 677 aa12.98□□□□□ -0.33
KARS-202ENST00000319410 COL18A1P39060 1754 aa12.98□□□□□ -0.33
KARS-202ENST00000319410 PDE3BQ13370 1112 aa12.98□□□□□ -0.33
KARS-202ENST00000319410 KCNH5Q8NCM2 988 aa12.98□□□□□ -0.33
KARS-202ENST00000319410 CRB1P82279 1406 aa12.97□□□□□ -0.33
KARS-202ENST00000319410 NFAT5O94916 1531 aa12.97□□□□□ -0.33
KARS-202ENST00000319410 EDC4Q6P2E9 1401 aaKnown RBP12.97□□□□□ -0.33
KARS-202ENST00000319410 CSB-PGBD3P0DP91 1061 aa12.96□□□□□ -0.33
KARS-202ENST00000319410 BAG6P46379 1132 aa12.96□□□□□ -0.33
KARS-202ENST00000319410 MYOM1P52179 1685 aa12.96□□□□□ -0.34
KARS-202ENST00000319410 PSDA5PKW4 1024 aaPredicted RBP12.95□□□□□ -0.34
KARS-202ENST00000319410 ZBTB47Q9UFB7 747 aaPredicted RBP12.95□□□□□ -0.34
KARS-202ENST00000319410 BRPF3Q9ULD4 1205 aa12.95□□□□□ -0.34
KARS-202ENST00000319410 KIF7Q2M1P5 1343 aa12.95□□□□□ -0.34
KARS-202ENST00000319410 WDR17Q8IZU2 1322 aa12.95□□□□□ -0.34
KARS-202ENST00000319410 NEFMP07197 916 aa12.94□□□□□ -0.34
KARS-202ENST00000319410 FAM196AQ6ZSG2 479 aa12.94□□□□□ -0.34
KARS-202ENST00000319410 THRAP3Q9Y2W1 955 aaKnown RBP12.94□□□□□ -0.34
KARS-202ENST00000319410 USP31Q70CQ4 1352 aa12.94□□□□□ -0.34
KARS-202ENST00000319410 RGPD1P0DJD0 1748 aa12.94□□□□□ -0.34
KARS-202ENST00000319410 TNS1Q9HBL0 1735 aaKnown RBP12.94□□□□□ -0.34
KARS-202ENST00000319410 FBLN1P23142 703 aa12.94□□□□□ -0.34
KARS-202ENST00000319410 IPO9Q96P70 1041 aaKnown RBP12.94□□□□□ -0.34
KARS-202ENST00000319410 CCDC7Q96M83 1385 aa12.93□□□□□ -0.34
KARS-202ENST00000319410 EZH2Q15910 746 aaKnown RBP12.93□□□□□ -0.34
KARS-202ENST00000319410 APBA3O96018 575 aa12.93□□□□□ -0.34
KARS-202ENST00000319410 USP54Q70EL1 1684 aa12.93□□□□□ -0.34
KARS-202ENST00000319410 PARP4Q9UKK3 1724 aaKnown RBP12.92□□□□□ -0.34
KARS-202ENST00000319410 LTN1O94822 1766 aa12.92□□□□□ -0.34
KARS-202ENST00000319410 LRRC37A3O60309 1634 aa12.92□□□□□ -0.34
KARS-202ENST00000319410 ANP32AP39687 249 aaKnown RBP12.91□□□□□ -0.34
KARS-202ENST00000319410 DDB1Q16531 1140 aa12.91□□□□□ -0.34
KARS-202ENST00000319410 OVOS2A0A0J9YW53 1432 aa12.91□□□□□ -0.34
KARS-202ENST00000319410 OVOS2Q6IE36 1432 aa12.91□□□□□ -0.34
KARS-202ENST00000319410 PTF1AQ7RTS3 328 aa12.9□□□□□ -0.34
KARS-202ENST00000319410 HSP90AA1P07900 732 aaKnown RBP12.9□□□□□ -0.34
KARS-202ENST00000319410 LTV1Q96GA3 475 aaPredicted RBP12.9□□□□□ -0.34
KARS-202ENST00000319410 CARD10Q9BWT7 1032 aa12.9□□□□□ -0.34
KARS-202ENST00000319410 NLRP2Q9NX02 1062 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms