RNA–Protein interactions for RNA: ENST00000317633.13

SERF1A-201, Transcript of small EDRK-rich factor 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SERF1A, Length 963 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERF1A-201ENST00000317633 RREB1Q92766 1687 aa28.54■■■□□ 2.16
SERF1A-201ENST00000317633 OVOS2A0A0G2JMS6 1433 aa28.53■■■□□ 2.16
SERF1A-201ENST00000317633 OVOS2A0A0J9YW53 1432 aa28.53■■■□□ 2.16
SERF1A-201ENST00000317633 OVOS2Q6IE36 1432 aa28.53■■■□□ 2.16
SERF1A-201ENST00000317633 TONSLQ96HA7 1378 aa28.53■■■□□ 2.16
SERF1A-201ENST00000317633 RGPD5Q99666 1765 aa28.53■■■□□ 2.16
SERF1A-201ENST00000317633 CDCA7Q9BWT1 371 aaPredicted RBP28.53■■■□□ 2.16
SERF1A-201ENST00000317633 AXIN2Q9Y2T1 843 aa28.53■■■□□ 2.16
SERF1A-201ENST00000317633 SOX12O15370 315 aa28.52■■■□□ 2.16
SERF1A-201ENST00000317633 LRRC37A3O60309 1634 aa28.51■■■□□ 2.15
SERF1A-201ENST00000317633 WNK3Q9BYP7 1800 aa28.51■■■□□ 2.15
SERF1A-201ENST00000317633 NBPF14Q5TI25 921 aa28.51■■■□□ 2.15
SERF1A-201ENST00000317633 NUP188Q5SRE5 1749 aa28.49■■■□□ 2.15
SERF1A-201ENST00000317633 PEAK1Q9H792 1746 aa28.49■■■□□ 2.15
SERF1A-201ENST00000317633 CSB-PGBD3P0DP91 1061 aa28.49■■■□□ 2.15
SERF1A-201ENST00000317633 SBF2Q86WG5 1849 aa28.48■■■□□ 2.15
SERF1A-201ENST00000317633 CARD10Q9BWT7 1032 aa28.47■■■□□ 2.15
SERF1A-201ENST00000317633 NFAT5O94916 1531 aa28.47■■■□□ 2.15
SERF1A-201ENST00000317633 ABCC6O95255 1503 aa28.47■■■□□ 2.15
SERF1A-201ENST00000317633 HDGFL2Q7Z4V5 671 aaPredicted RBP28.46■■■□□ 2.15
SERF1A-201ENST00000317633 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.46■■■□□ 2.15
SERF1A-201ENST00000317633 TMC1Q8TDI8 760 aa28.46■■■□□ 2.15
SERF1A-201ENST00000317633 USP31Q70CQ4 1352 aa28.45■■■□□ 2.14
SERF1A-201ENST00000317633 RGPD3A6NKT7 1758 aaPredicted RBP28.43■■■□□ 2.14
SERF1A-201ENST00000317633 RGPD4Q7Z3J3 1758 aa28.43■■■□□ 2.14
SERF1A-201ENST00000317633 USP54Q70EL1 1684 aa28.43■■■□□ 2.14
SERF1A-201ENST00000317633 CCDC7Q96M83 1385 aa28.42■■■□□ 2.14
SERF1A-201ENST00000317633 PUS7Q96PZ0 661 aaKnown RBP28.42■■■□□ 2.14
SERF1A-201ENST00000317633 CD163L1Q9NR16 1453 aa28.41■■■□□ 2.14
SERF1A-201ENST00000317633 PLSCR1O15162 318 aa28.41■■■□□ 2.14
SERF1A-201ENST00000317633 BCL11BQ9C0K0 894 aaPredicted RBP28.41■■■□□ 2.14
SERF1A-201ENST00000317633 TERF2IPQ9NYB0 399 aa28.41■■■□□ 2.14
SERF1A-201ENST00000317633 EXOC5O00471 708 aa28.39■■■□□ 2.14
SERF1A-201ENST00000317633 BCL9O00512 1426 aa28.39■■■□□ 2.14
SERF1A-201ENST00000317633 NME9Q86XW9 330 aa28.39■■■□□ 2.14
SERF1A-201ENST00000317633 MARCH10Q8NA82 808 aaPredicted RBP28.39■■■□□ 2.14
SERF1A-201ENST00000317633 SLC12A5Q9H2X9 1139 aa28.39■■■□□ 2.14
SERF1A-201ENST00000317633 LTN1O94822 1766 aa28.39■■■□□ 2.13
SERF1A-201ENST00000317633 EDC4Q6P2E9 1401 aaKnown RBP28.38■■■□□ 2.13
SERF1A-201ENST00000317633 SLC24A1O60721 1099 aa28.37■■■□□ 2.13
SERF1A-201ENST00000317633 ERBB3P21860 1342 aa28.33■■■□□ 2.13
SERF1A-201ENST00000317633 A0A1W2PP64 1363 aa28.33■■■□□ 2.13
SERF1A-201ENST00000317633 NINLQ9Y2I6 1382 aa28.32■■■□□ 2.12
SERF1A-201ENST00000317633 NLRP2Q9NX02 1062 aa28.31■■■□□ 2.12
SERF1A-201ENST00000317633 TNS2Q63HR2 1409 aa28.3■■■□□ 2.12
SERF1A-201ENST00000317633 ST20-MTHFSA0A0A6YYL1 179 aa28.29■■■□□ 2.12
SERF1A-201ENST00000317633 PTF1AQ7RTS3 328 aa28.29■■■□□ 2.12
SERF1A-201ENST00000317633 SPON1Q9HCB6 807 aa28.29■■■□□ 2.12
SERF1A-201ENST00000317633 TESK2Q96S53 571 aa28.28■■■□□ 2.12
SERF1A-201ENST00000317633 IL2RBP14784 551 aa28.27■■■□□ 2.12
SERF1A-201ENST00000317633 ANKRD24Q8TF21 1146 aa28.27■■■□□ 2.12
SERF1A-201ENST00000317633 KCNQ2O43526 872 aa28.26■■■□□ 2.11
SERF1A-201ENST00000317633 TRIM26Q12899 539 aaPredicted RBP28.26■■■□□ 2.11
SERF1A-201ENST00000317633 PPP1R1BQ9UD71 204 aaPredicted RBP28.24■■■□□ 2.11
SERF1A-201ENST00000317633 KAT6BQ8WYB5 2073 aa28.22■■■□□ 2.11
SERF1A-201ENST00000317633 PROM2Q8N271 834 aa28.22■■■□□ 2.11
SERF1A-201ENST00000317633 COG3Q96JB2 828 aa28.22■■■□□ 2.11
SERF1A-201ENST00000317633 NHSQ6T4R5 1651 aa28.22■■■□□ 2.11
SERF1A-201ENST00000317633 TXNRD1Q16881 649 aa28.21■■■□□ 2.11
SERF1A-201ENST00000317633 IP6K1Q92551 441 aa28.21■■■□□ 2.11
SERF1A-201ENST00000317633 ANO8Q9HCE9 1232 aaPredicted RBP28.21■■■□□ 2.11
SERF1A-201ENST00000317633 FAM208AQ9UK61 1670 aaKnown RBP28.2■■■□□ 2.11
SERF1A-201ENST00000317633 STK32BQ9NY57 414 aa28.18■■■□□ 2.1
SERF1A-201ENST00000317633 CASZ1Q86V15 1759 aa28.18■■■□□ 2.1
SERF1A-201ENST00000317633 TMF1P82094 1093 aa28.17■■■□□ 2.1
SERF1A-201ENST00000317633 ACSBG1Q96GR2 724 aa28.17■■■□□ 2.1
SERF1A-201ENST00000317633 ANKRD36BQ8N2N9 1353 aa28.16■■■□□ 2.1
SERF1A-201ENST00000317633 LTV1Q96GA3 475 aaPredicted RBP28.14■■■□□ 2.1
SERF1A-201ENST00000317633 AMPHP49418 695 aa28.13■■■□□ 2.09
SERF1A-201ENST00000317633 SLC15A2Q16348 729 aa28.13■■■□□ 2.09
SERF1A-201ENST00000317633 USP47Q96K76 1375 aa28.12■■■□□ 2.09
SERF1A-201ENST00000317633 DCAF8L1A6NGE4 600 aa28.12■■■□□ 2.09
SERF1A-201ENST00000317633 BTAF1O14981 1849 aa28.12■■■□□ 2.09
SERF1A-201ENST00000317633 MAP3K19Q56UN5 1328 aa28.12■■■□□ 2.09
SERF1A-201ENST00000317633 HOXC9P31274 260 aa28.1■■■□□ 2.09
SERF1A-201ENST00000317633 CDCA8Q53HL2 280 aa28.1■■■□□ 2.09
SERF1A-201ENST00000317633 ZBTB7AO95365 584 aa28.07■■■□□ 2.08
SERF1A-201ENST00000317633 DDX54Q8TDD1 881 aaKnown RBP28.07■■■□□ 2.08
SERF1A-201ENST00000317633 PDGFDQ9GZP0 370 aaPredicted RBP28.07■■■□□ 2.08
SERF1A-201ENST00000317633 RTL1A6NKG5 1358 aa28.06■■■□□ 2.08
SERF1A-201ENST00000317633 FYB1O15117 783 aa28.05■■■□□ 2.08
SERF1A-201ENST00000317633 RGPD2P0DJD1 1756 aa28.05■■■□□ 2.08
SERF1A-201ENST00000317633 FBLN1P23142 703 aa28.05■■■□□ 2.08
SERF1A-201ENST00000317633 GGNBP2Q9H3C7 697 aa28.03■■■□□ 2.08
SERF1A-201ENST00000317633 MTFR1LQ9H019 292 aa28.02■■■□□ 2.08
SERF1A-201ENST00000317633 TIMELESSQ9UNS1 1208 aa28.02■■■□□ 2.08
SERF1A-201ENST00000317633 ATF5Q9Y2D1 282 aaPredicted RBP28.02■■■□□ 2.08
SERF1A-201ENST00000317633 KIF20BQ96Q89 1820 aa28.02■■■□□ 2.08
SERF1A-201ENST00000317633 PAPPAQ13219 1627 aa28.01■■■□□ 2.07
SERF1A-201ENST00000317633 PTGER2P43116 358 aa28.01■■■□□ 2.07
SERF1A-201ENST00000317633 SMG6Q86US8 1419 aaKnown RBP28.01■■■□□ 2.07
SERF1A-201ENST00000317633 RRS1Q15050 365 aaKnown RBP28■■■□□ 2.07
SERF1A-201ENST00000317633 ZCRB1Q8TBF4 217 aaKnown RBP28■■■□□ 2.07
SERF1A-201ENST00000317633 MYOM1P52179 1685 aa28■■■□□ 2.07
SERF1A-201ENST00000317633 SLC27A3Q5K4L6 730 aa27.98■■■□□ 2.07
SERF1A-201ENST00000317633 CGNL1Q0VF96 1302 aa27.97■■■□□ 2.07
SERF1A-201ENST00000317633 YY1P25490 414 aa27.97■■■□□ 2.07
SERF1A-201ENST00000317633 SYTL4Q96C24 671 aaPredicted RBP27.97■■■□□ 2.07
SERF1A-201ENST00000317633 DOT1LQ8TEK3 1739 aa27.95■■■□□ 2.07
SERF1A-201ENST00000317633 SHANK3Q9BYB0 1731 aa27.95■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms