RNA–Protein interactions for RNA: ENST00000316534.8

NPHP1-201, Transcript of nephrocystin 1, humanhuman

TSL 1 (best) BASIC

Gene NPHP1, Length 3,756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-201ENST00000316534 CACNA1FO60840 1977 aa9.44□□□□□ -0.9
NPHP1-201ENST00000316534 IGSF1Q8N6C5 1336 aa9.44□□□□□ -0.9
NPHP1-201ENST00000316534 OVOS2A0A0G2JMS6 1433 aa9.44□□□□□ -0.9
NPHP1-201ENST00000316534 KDM4FA0A1W2PPD8 638 aa9.43□□□□□ -0.9
NPHP1-201ENST00000316534 KDM2BQ8NHM5 1336 aa9.43□□□□□ -0.9
NPHP1-201ENST00000316534 WNK3Q9BYP7 1800 aa9.43□□□□□ -0.9
NPHP1-201ENST00000316534 EMILIN1Q9Y6C2 1016 aa9.43□□□□□ -0.9
NPHP1-201ENST00000316534 SHANK3Q9BYB0 1731 aa9.43□□□□□ -0.9
NPHP1-201ENST00000316534 CRB1P82279 1406 aa9.43□□□□□ -0.9
NPHP1-201ENST00000316534 CNGB1Q14028 1251 aaPredicted RBP9.42□□□□□ -0.9
NPHP1-201ENST00000316534 SCN11AQ9UI33 1791 aa9.42□□□□□ -0.9
NPHP1-201ENST00000316534 AAMPQ13685 434 aa9.41□□□□□ -0.9
NPHP1-201ENST00000316534 EIF4A2Q14240 407 aaKnown RBP9.41□□□□□ -0.9
NPHP1-201ENST00000316534 NFE2L2Q16236 605 aa9.41□□□□□ -0.9
NPHP1-201ENST00000316534 PLPPR3Q6T4P5 718 aa9.41□□□□□ -0.9
NPHP1-201ENST00000316534 PLCH1Q4KWH8 1693 aa9.41□□□□□ -0.9
NPHP1-201ENST00000316534 PAPPAQ13219 1627 aa9.41□□□□□ -0.9
NPHP1-201ENST00000316534 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.41□□□□□ -0.9
NPHP1-201ENST00000316534 PDE3AQ14432 1141 aa9.41□□□□□ -0.9
NPHP1-201ENST00000316534 MAP3K19Q56UN5 1328 aa9.4□□□□□ -0.9
NPHP1-201ENST00000316534 U2AF1L5P0DN76 240 aaPredicted RBP9.4□□□□□ -0.91
NPHP1-201ENST00000316534 U2AF1Q01081 240 aaKnown RBP eCLIP9.4□□□□□ -0.91
NPHP1-201ENST00000316534 ZNF428Q96B54 188 aa9.4□□□□□ -0.91
NPHP1-201ENST00000316534 PHF8Q9UPP1 1060 aa9.4□□□□□ -0.91
NPHP1-201ENST00000316534 FANCIQ9NVI1 1328 aa9.4□□□□□ -0.91
NPHP1-201ENST00000316534 RARSP54136 660 aaKnown RBP9.39□□□□□ -0.91
NPHP1-201ENST00000316534 GLI3P10071 1580 aa9.39□□□□□ -0.91
NPHP1-201ENST00000316534 AHDC1Q5TGY3 1603 aaPredicted RBP9.39□□□□□ -0.91
NPHP1-201ENST00000316534 LTBP4Q8N2S1 1624 aa9.39□□□□□ -0.91
NPHP1-201ENST00000316534 MRC1P22897 1456 aa9.39□□□□□ -0.91
NPHP1-201ENST00000316534 TNNT2P45379 298 aaPredicted RBP9.39□□□□□ -0.91
NPHP1-201ENST00000316534 MYH16Q9H6N6 1097 aa9.39□□□□□ -0.91
NPHP1-201ENST00000316534 MSH6P52701 1360 aa9.38□□□□□ -0.91
NPHP1-201ENST00000316534 KIAA0232Q92628 1395 aa9.38□□□□□ -0.91
NPHP1-201ENST00000316534 PHACTR3Q96KR7 559 aa9.38□□□□□ -0.91
NPHP1-201ENST00000316534 IFT57Q9NWB7 429 aa9.38□□□□□ -0.91
NPHP1-201ENST00000316534 BCANQ96GW7 911 aa9.38□□□□□ -0.91
NPHP1-201ENST00000316534 C19orf44Q9H6X5 657 aa9.38□□□□□ -0.91
NPHP1-201ENST00000316534 ALDH1L2Q3SY69 923 aa9.37□□□□□ -0.91
NPHP1-201ENST00000316534 SENP3Q9H4L4 574 aaPredicted RBP9.37□□□□□ -0.91
NPHP1-201ENST00000316534 UBR2Q8IWV8 1755 aa9.37□□□□□ -0.91
NPHP1-201ENST00000316534 HTATSF1O43719 755 aaKnown RBP9.37□□□□□ -0.91
NPHP1-201ENST00000316534 FBLN1P23142 703 aa9.37□□□□□ -0.91
NPHP1-201ENST00000316534 TNS3Q68CZ2 1445 aa9.37□□□□□ -0.91
NPHP1-201ENST00000316534 CPDO75976 1380 aa9.36□□□□□ -0.91
NPHP1-201ENST00000316534 TMEM94Q12767 1356 aa9.36□□□□□ -0.91
NPHP1-201ENST00000316534 HOXC9P31274 260 aa9.36□□□□□ -0.91
NPHP1-201ENST00000316534 PRKAR2BP31323 418 aa9.36□□□□□ -0.91
NPHP1-201ENST00000316534 EXOC6Q8TAG9 804 aa9.36□□□□□ -0.91
NPHP1-201ENST00000316534 RRS1Q15050 365 aaKnown RBP9.36□□□□□ -0.91
NPHP1-201ENST00000316534 CEMIPQ8WUJ3 1361 aa9.35□□□□□ -0.91
NPHP1-201ENST00000316534 RGS12O14924 1447 aa9.35□□□□□ -0.91
NPHP1-201ENST00000316534 LAMB4A4D0S4 1761 aa9.35□□□□□ -0.91
NPHP1-201ENST00000316534 C20orf194Q5TEA3 1177 aa9.35□□□□□ -0.91
NPHP1-201ENST00000316534 CALD1Q05682 793 aaKnown RBP9.35□□□□□ -0.91
NPHP1-201ENST00000316534 IP6K1Q92551 441 aa9.35□□□□□ -0.91
NPHP1-201ENST00000316534 BABAM1Q9NWV8 329 aa9.35□□□□□ -0.91
NPHP1-201ENST00000316534 LMOD3Q0VAK6 560 aa9.35□□□□□ -0.91
NPHP1-201ENST00000316534 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.35□□□□□ -0.91
NPHP1-201ENST00000316534 TUBGCP6Q96RT7 1819 aa9.34□□□□□ -0.91
NPHP1-201ENST00000316534 MAPK8IP3Q9UPT6 1336 aa9.34□□□□□ -0.91
NPHP1-201ENST00000316534 RIPK4P57078 832 aa9.34□□□□□ -0.91
NPHP1-201ENST00000316534 IRX6P78412 446 aaPredicted RBP9.34□□□□□ -0.91
NPHP1-201ENST00000316534 PMFBP1Q8TBY8 1022 aa9.34□□□□□ -0.91
NPHP1-201ENST00000316534 CRBNQ96SW2 442 aa9.34□□□□□ -0.91
NPHP1-201ENST00000316534 KCNH5Q8NCM2 988 aa9.34□□□□□ -0.91
NPHP1-201ENST00000316534 SOS1Q07889 1333 aaPredicted RBP9.34□□□□□ -0.91
NPHP1-201ENST00000316534 COL16A1Q07092 1604 aaPredicted RBP9.34□□□□□ -0.91
NPHP1-201ENST00000316534 CICQ96RK0 1608 aaPredicted RBP9.34□□□□□ -0.91
NPHP1-201ENST00000316534 HSP90AB2PQ58FF8 381 aa9.34□□□□□ -0.92
NPHP1-201ENST00000316534 CFAP44Q96MT7 982 aa9.34□□□□□ -0.92
NPHP1-201ENST00000316534 NRAPQ86VF7 1730 aa9.33□□□□□ -0.92
NPHP1-201ENST00000316534 IBTKQ9P2D0 1353 aaPredicted RBP9.33□□□□□ -0.92
NPHP1-201ENST00000316534 BCAR3O75815 825 aa9.33□□□□□ -0.92
NPHP1-201ENST00000316534 ARHGEF25Q86VW2 580 aa9.33□□□□□ -0.92
NPHP1-201ENST00000316534 NGDNQ8NEJ9 315 aaKnown RBP9.33□□□□□ -0.92
NPHP1-201ENST00000316534 ARHGAP45Q92619 1136 aa9.33□□□□□ -0.92
NPHP1-201ENST00000316534 RRP7AQ9Y3A4 280 aaKnown RBP9.33□□□□□ -0.92
NPHP1-201ENST00000316534 CHL1O00533 1208 aa9.32□□□□□ -0.92
NPHP1-201ENST00000316534 SALL2Q9Y467 1007 aaPredicted RBP9.32□□□□□ -0.92
NPHP1-201ENST00000316534 C5P01031 1676 aa9.32□□□□□ -0.92
NPHP1-201ENST00000316534 PXDNLA1KZ92 1463 aa9.32□□□□□ -0.92
NPHP1-201ENST00000316534 U2SURPO15042 1029 aaKnown RBP9.32□□□□□ -0.92
NPHP1-201ENST00000316534 EYA1Q99502 592 aa9.32□□□□□ -0.92
NPHP1-201ENST00000316534 COL14A1Q05707 1796 aaKnown RBP9.31□□□□□ -0.92
NPHP1-201ENST00000316534 GNAI1P63096 354 aa9.31□□□□□ -0.92
NPHP1-201ENST00000316534 VAMP4O75379 141 aa9.31□□□□□ -0.92
NPHP1-201ENST00000316534 B4GALNT3Q6L9W6 998 aa9.31□□□□□ -0.92
NPHP1-201ENST00000316534 SENP3-EIF4A1A0A087X0R7 540 aa9.3□□□□□ -0.92
NPHP1-201ENST00000316534 AEBP1Q8IUX7 1158 aa9.3□□□□□ -0.92
NPHP1-201ENST00000316534 SOS2Q07890 1332 aaPredicted RBP9.3□□□□□ -0.92
NPHP1-201ENST00000316534 HEG1Q9ULI3 1381 aa9.3□□□□□ -0.92
NPHP1-201ENST00000316534 LRP6O75581 1613 aa9.3□□□□□ -0.92
NPHP1-201ENST00000316534 ROBO1Q9Y6N7 1651 aa9.3□□□□□ -0.92
NPHP1-201ENST00000316534 PLIN1O60240 522 aa9.3□□□□□ -0.92
NPHP1-201ENST00000316534 ABCC4O15439 1325 aa9.3□□□□□ -0.92
NPHP1-201ENST00000316534 ORAI2Q96SN7 254 aa9.3□□□□□ -0.92
NPHP1-201ENST00000316534 MS4A1P11836 297 aa9.29□□□□□ -0.92
NPHP1-201ENST00000316534 EXOSC9Q06265 439 aaKnown RBP9.29□□□□□ -0.92
NPHP1-201ENST00000316534 CENPQQ7L2Z9 268 aaPredicted RBP9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms