RNA–Protein interactions for RNA: ENST00000316097.12

SCAMP4-201, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP4, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-201ENST00000316097 MAP2P11137 1827 aaKnown RBP21.85■■□□□ 1.09
SCAMP4-201ENST00000316097 VIRMAQ69YN4 1812 aaKnown RBP21.85■■□□□ 1.09
SCAMP4-201ENST00000316097 MAPK8IP3Q9UPT6 1336 aa21.85■■□□□ 1.09
SCAMP4-201ENST00000316097 TOPAZ1Q8N9V7 1692 aa21.84■■□□□ 1.09
SCAMP4-201ENST00000316097 IQSEC2Q5JU85 1478 aa21.84■■□□□ 1.09
SCAMP4-201ENST00000316097 CANXP27824 592 aaKnown RBP21.83■■□□□ 1.09
SCAMP4-201ENST00000316097 CLUAP1Q96AJ1 413 aa21.83■■□□□ 1.09
SCAMP4-201ENST00000316097 COG6Q9Y2V7 657 aa21.83■■□□□ 1.09
SCAMP4-201ENST00000316097 PRKAR2BP31323 418 aa21.83■■□□□ 1.09
SCAMP4-201ENST00000316097 IL13P35225 146 aa21.83■■□□□ 1.09
SCAMP4-201ENST00000316097 PLEKHG5O94827 1062 aa21.83■■□□□ 1.08
SCAMP4-201ENST00000316097 TMPOP42166 694 aaKnown RBP21.83■■□□□ 1.08
SCAMP4-201ENST00000316097 PANK1Q8TE04 598 aa21.83■■□□□ 1.08
SCAMP4-201ENST00000316097 PHACTR3Q96KR7 559 aa21.83■■□□□ 1.08
SCAMP4-201ENST00000316097 CHD2O14647 1828 aaKnown RBP21.82■■□□□ 1.08
SCAMP4-201ENST00000316097 ESCO1Q5FWF5 840 aa21.82■■□□□ 1.08
SCAMP4-201ENST00000316097 PHF23Q9BUL5 403 aaPredicted RBP21.82■■□□□ 1.08
SCAMP4-201ENST00000316097 PDE3AQ14432 1141 aa21.81■■□□□ 1.08
SCAMP4-201ENST00000316097 HSP90AB2PQ58FF8 381 aa21.81■■□□□ 1.08
SCAMP4-201ENST00000316097 SSH2Q76I76 1423 aa21.81■■□□□ 1.08
SCAMP4-201ENST00000316097 RIPK4P57078 832 aa21.8■■□□□ 1.08
SCAMP4-201ENST00000316097 PROSER2Q86WR7 435 aaPredicted RBP21.8■■□□□ 1.08
SCAMP4-201ENST00000316097 AATKQ6ZMQ8 1374 aa21.8■■□□□ 1.08
SCAMP4-201ENST00000316097 NLRP6P59044 892 aa21.8■■□□□ 1.08
SCAMP4-201ENST00000316097 TRIM35Q9UPQ4 493 aa21.8■■□□□ 1.08
SCAMP4-201ENST00000316097 XPCQ01831 940 aaPredicted RBP21.79■■□□□ 1.08
SCAMP4-201ENST00000316097 KDM4FA0A1W2PPD8 638 aa21.79■■□□□ 1.08
SCAMP4-201ENST00000316097 NGEFQ8N5V2 710 aa21.79■■□□□ 1.08
SCAMP4-201ENST00000316097 ORAI2Q96SN7 254 aa21.79■■□□□ 1.08
SCAMP4-201ENST00000316097 RRAGDQ9NQL2 400 aaPredicted RBP21.79■■□□□ 1.08
SCAMP4-201ENST00000316097 PHF8Q9UPP1 1060 aa21.79■■□□□ 1.08
SCAMP4-201ENST00000316097 L1TD1Q5T7N2 865 aaKnown RBP21.78■■□□□ 1.08
SCAMP4-201ENST00000316097 FCHSD2O94868 740 aa21.78■■□□□ 1.08
SCAMP4-201ENST00000316097 OVOS2A0A0J9YW53 1432 aa21.78■■□□□ 1.08
SCAMP4-201ENST00000316097 OVOS2Q6IE36 1432 aa21.78■■□□□ 1.08
SCAMP4-201ENST00000316097 ABTB2Q8N961 1025 aa21.77■■□□□ 1.08
SCAMP4-201ENST00000316097 TSR2Q969E8 191 aaKnown RBP21.77■■□□□ 1.08
SCAMP4-201ENST00000316097 ARXQ96QS3 562 aa21.77■■□□□ 1.08
SCAMP4-201ENST00000316097 ANTXR1Q9H6X2 564 aa21.77■■□□□ 1.08
SCAMP4-201ENST00000316097 NALCNQ8IZF0 1738 aa21.77■■□□□ 1.08
SCAMP4-201ENST00000316097 NRKQ7Z2Y5 1582 aa21.77■■□□□ 1.08
SCAMP4-201ENST00000316097 EIF4A2Q14240 407 aaKnown RBP21.76■■□□□ 1.07
SCAMP4-201ENST00000316097 AEBP1Q8IUX7 1158 aa21.76■■□□□ 1.07
SCAMP4-201ENST00000316097 CCDC27Q2M243 656 aa21.75■■□□□ 1.07
SCAMP4-201ENST00000316097 WDR63Q8IWG1 891 aa21.75■■□□□ 1.07
SCAMP4-201ENST00000316097 UPF2Q9HAU5 1272 aaKnown RBP21.75■■□□□ 1.07
SCAMP4-201ENST00000316097 MAP3K19Q56UN5 1328 aa21.74■■□□□ 1.07
SCAMP4-201ENST00000316097 TTC21AQ8NDW8 1320 aa21.74■■□□□ 1.07
SCAMP4-201ENST00000316097 FOXO3O43524 673 aa21.74■■□□□ 1.07
SCAMP4-201ENST00000316097 THUMPD2Q9BTF0 503 aaKnown RBP21.74■■□□□ 1.07
SCAMP4-201ENST00000316097 ANKARQ7Z5J8 1434 aa21.74■■□□□ 1.07
SCAMP4-201ENST00000316097 BCL2L13Q9BXK5 485 aa21.73■■□□□ 1.07
SCAMP4-201ENST00000316097 FMN2Q9NZ56 1722 aa21.73■■□□□ 1.07
SCAMP4-201ENST00000316097 CDK12Q9NYV4 1490 aaPredicted RBP21.73■■□□□ 1.07
SCAMP4-201ENST00000316097 PSME1Q06323 249 aa21.73■■□□□ 1.07
SCAMP4-201ENST00000316097 TBC1D2Q9BYX2 928 aa21.73■■□□□ 1.07
SCAMP4-201ENST00000316097 ADGRL3Q9HAR2 1447 aa21.72■■□□□ 1.07
SCAMP4-201ENST00000316097 LRRC7Q96NW7 1537 aa21.72■■□□□ 1.07
SCAMP4-201ENST00000316097 TBC1D32Q96NH3 1257 aa21.72■■□□□ 1.07
SCAMP4-201ENST00000316097 SULT6B1Q6IMI4 303 aa21.71■■□□□ 1.07
SCAMP4-201ENST00000316097 USP31Q70CQ4 1352 aa21.7■■□□□ 1.06
SCAMP4-201ENST00000316097 SPRYD3Q8NCJ5 442 aa21.7■■□□□ 1.06
SCAMP4-201ENST00000316097 AMPHP49418 695 aa21.69■■□□□ 1.06
SCAMP4-201ENST00000316097 PNNQ9H307 717 aaKnown RBP21.69■■□□□ 1.06
SCAMP4-201ENST00000316097 PCDHB15Q9Y5E8 787 aa21.69■■□□□ 1.06
SCAMP4-201ENST00000316097 LMOD2Q6P5Q4 547 aa21.68■■□□□ 1.06
SCAMP4-201ENST00000316097 PDZRN3Q9UPQ7 1066 aa21.68■■□□□ 1.06
SCAMP4-201ENST00000316097 FAM83GA6ND36 823 aa21.67■■□□□ 1.06
SCAMP4-201ENST00000316097 TNNQ9UQP3 1299 aa21.67■■□□□ 1.06
SCAMP4-201ENST00000316097 ZBTB7CA1YPR0 619 aa21.67■■□□□ 1.06
SCAMP4-201ENST00000316097 PIK3C2AO00443 1686 aa21.66■■□□□ 1.06
SCAMP4-201ENST00000316097 DCTN1Q14203 1278 aa21.66■■□□□ 1.06
SCAMP4-201ENST00000316097 DDX17Q92841 729 aaKnown RBP21.66■■□□□ 1.06
SCAMP4-201ENST00000316097 PEAK1Q9H792 1746 aa21.66■■□□□ 1.06
SCAMP4-201ENST00000316097 GOLGA6L3A6NEY3 463 aa21.66■■□□□ 1.06
SCAMP4-201ENST00000316097 XRCC6P12956 609 aaKnown RBP eCLIP21.66■■□□□ 1.06
SCAMP4-201ENST00000316097 EXOSC9Q06265 439 aaKnown RBP21.66■■□□□ 1.06
SCAMP4-201ENST00000316097 NFE2L2Q16236 605 aa21.66■■□□□ 1.06
SCAMP4-201ENST00000316097 LTV1Q96GA3 475 aaPredicted RBP21.66■■□□□ 1.06
SCAMP4-201ENST00000316097 GZF1Q9H116 711 aaPredicted RBP21.66■■□□□ 1.06
SCAMP4-201ENST00000316097 MYH16Q9H6N6 1097 aa21.66■■□□□ 1.06
SCAMP4-201ENST00000316097 RLBP1P12271 317 aa21.65■■□□□ 1.06
SCAMP4-201ENST00000316097 RARSP54136 660 aaKnown RBP21.65■■□□□ 1.06
SCAMP4-201ENST00000316097 C19orf44Q9H6X5 657 aa21.64■■□□□ 1.06
SCAMP4-201ENST00000316097 TMEM94Q12767 1356 aa21.64■■□□□ 1.05
SCAMP4-201ENST00000316097 MCM4P33991 863 aa21.63■■□□□ 1.05
SCAMP4-201ENST00000316097 PANK2Q9BZ23 570 aa21.62■■□□□ 1.05
SCAMP4-201ENST00000316097 NCBP3Q53F19 620 aaKnown RBP21.61■■□□□ 1.05
SCAMP4-201ENST00000316097 FSD2A1L4K1 749 aa21.61■■□□□ 1.05
SCAMP4-201ENST00000316097 EYA1Q99502 592 aa21.6■■□□□ 1.05
SCAMP4-201ENST00000316097 HOXC9P31274 260 aa21.6■■□□□ 1.05
SCAMP4-201ENST00000316097 AAMPQ13685 434 aa21.6■■□□□ 1.05
SCAMP4-201ENST00000316097 RWDD1Q9H446 243 aaPredicted RBP21.59■■□□□ 1.05
SCAMP4-201ENST00000316097 SBNO1A3KN83 1393 aa21.59■■□□□ 1.05
SCAMP4-201ENST00000316097 FLT4P35916 1363 aa21.59■■□□□ 1.05
SCAMP4-201ENST00000316097 ATF3P18847 181 aa21.59■■□□□ 1.05
SCAMP4-201ENST00000316097 NAP1L5Q96NT1 182 aaPredicted RBP21.58■■□□□ 1.05
SCAMP4-201ENST00000316097 NWD1Q149M9 1564 aa21.58■■□□□ 1.04
SCAMP4-201ENST00000316097 ELL2O00472 640 aaPredicted RBP21.57■■□□□ 1.04
SCAMP4-201ENST00000316097 KRT28Q7Z3Y7 464 aa21.57■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms