RNA–Protein interactions for RNA: ENST00000310931.8

HDLBP-201, Transcript of high density lipoprotein binding protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDLBP, Length 4,571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-201ENST00000310931 DDX11L8A8MPP1 907 aa11.79□□□□□ -0.52
HDLBP-201ENST00000310931 PPP2R1AP30153 589 aa11.79□□□□□ -0.52
HDLBP-201ENST00000310931 CPSF1Q10570 1443 aaKnown RBP11.79□□□□□ -0.52
HDLBP-201ENST00000310931 PAK3O75914 559 aaPredicted RBP11.78□□□□□ -0.52
HDLBP-201ENST00000310931 BBXQ8WY36 941 aaPredicted RBP11.78□□□□□ -0.52
HDLBP-201ENST00000310931 FMN2Q9NZ56 1722 aa11.78□□□□□ -0.52
HDLBP-201ENST00000310931 POLR3AO14802 1390 aaPredicted RBP11.78□□□□□ -0.52
HDLBP-201ENST00000310931 DDX49Q9Y6V7 483 aaKnown RBP11.77□□□□□ -0.52
HDLBP-201ENST00000310931 NOC3LQ8WTT2 800 aaKnown RBP11.77□□□□□ -0.52
HDLBP-201ENST00000310931 PHF8Q9UPP1 1060 aa11.77□□□□□ -0.52
HDLBP-201ENST00000310931 KIF1AQ12756 1690 aa11.77□□□□□ -0.53
HDLBP-201ENST00000310931 TEX35Q5T0J7 233 aa11.77□□□□□ -0.53
HDLBP-201ENST00000310931 TOPAZ1Q8N9V7 1692 aa11.77□□□□□ -0.53
HDLBP-201ENST00000310931 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.76□□□□□ -0.53
HDLBP-201ENST00000310931 RCAN3Q9UKA8 241 aa11.76□□□□□ -0.53
HDLBP-201ENST00000310931 ANKRD26Q9UPS8 1709 aa11.76□□□□□ -0.53
HDLBP-201ENST00000310931 GPS2Q13227 327 aa11.76□□□□□ -0.53
HDLBP-201ENST00000310931 CARD14Q9BXL6 1004 aa11.76□□□□□ -0.53
HDLBP-201ENST00000310931 ACEP12821 1306 aa11.75□□□□□ -0.53
HDLBP-201ENST00000310931 AATKQ6ZMQ8 1374 aa11.75□□□□□ -0.53
HDLBP-201ENST00000310931 AEBP1Q8IUX7 1158 aa11.75□□□□□ -0.53
HDLBP-201ENST00000310931 KIF20BQ96Q89 1820 aa11.75□□□□□ -0.53
HDLBP-201ENST00000310931 USP6P35125 1406 aa11.75□□□□□ -0.53
HDLBP-201ENST00000310931 NEUROD2Q15784 382 aa11.75□□□□□ -0.53
HDLBP-201ENST00000310931 ZBED9Q6R2W3 1325 aa11.75□□□□□ -0.53
HDLBP-201ENST00000310931 NOM1Q5C9Z4 860 aaKnown RBP11.74□□□□□ -0.53
HDLBP-201ENST00000310931 TTC21BQ7Z4L5 1316 aa11.74□□□□□ -0.53
HDLBP-201ENST00000310931 HSPA2P54652 639 aa11.74□□□□□ -0.53
HDLBP-201ENST00000310931 KIF24Q5T7B8 1368 aa11.74□□□□□ -0.53
HDLBP-201ENST00000310931 MON2Q7Z3U7 1717 aa11.74□□□□□ -0.53
HDLBP-201ENST00000310931 AKAP12Q02952 1782 aa11.74□□□□□ -0.53
HDLBP-201ENST00000310931 LRRC7Q96NW7 1537 aa11.74□□□□□ -0.53
HDLBP-201ENST00000310931 PDE3BQ13370 1112 aa11.74□□□□□ -0.53
HDLBP-201ENST00000310931 FOXD4L1Q9NU39 408 aa11.73□□□□□ -0.53
HDLBP-201ENST00000310931 NCBP3Q53F19 620 aaKnown RBP11.73□□□□□ -0.53
HDLBP-201ENST00000310931 TMEM94Q12767 1356 aa11.73□□□□□ -0.53
HDLBP-201ENST00000310931 PDIA4P13667 645 aaKnown RBP11.73□□□□□ -0.53
HDLBP-201ENST00000310931 MRE11P49959 708 aa11.73□□□□□ -0.53
HDLBP-201ENST00000310931 MFAP1P55081 439 aaKnown RBP11.73□□□□□ -0.53
HDLBP-201ENST00000310931 PNISRQ8TF01 805 aaKnown RBP11.73□□□□□ -0.53
HDLBP-201ENST00000310931 SKOR2Q2VWA4 1001 aaPredicted RBP11.72□□□□□ -0.53
HDLBP-201ENST00000310931 USP31Q70CQ4 1352 aa11.72□□□□□ -0.53
HDLBP-201ENST00000310931 KCNH5Q8NCM2 988 aa11.72□□□□□ -0.53
HDLBP-201ENST00000310931 PATL2C9JE40 543 aaKnown RBP11.72□□□□□ -0.53
HDLBP-201ENST00000310931 FYB1O15117 783 aa11.72□□□□□ -0.53
HDLBP-201ENST00000310931 ESCO1Q5FWF5 840 aa11.72□□□□□ -0.53
HDLBP-201ENST00000310931 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.72□□□□□ -0.536e-7■■□□□ 12.9
HDLBP-201ENST00000310931 CD163L1Q9NR16 1453 aa11.72□□□□□ -0.53
HDLBP-201ENST00000310931 PRR36Q9H6K5 1346 aa11.71□□□□□ -0.53
HDLBP-201ENST00000310931 NPHP3Q7Z494 1330 aa11.71□□□□□ -0.53
HDLBP-201ENST00000310931 AEBP2Q6ZN18 517 aaPredicted RBP11.71□□□□□ -0.53
HDLBP-201ENST00000310931 NALCNQ8IZF0 1738 aa11.7□□□□□ -0.54
HDLBP-201ENST00000310931 ZNF592Q92610 1267 aa11.7□□□□□ -0.54
HDLBP-201ENST00000310931 GGNBP2Q9H3C7 697 aa11.7□□□□□ -0.54
HDLBP-201ENST00000310931 KIAA1211Q6ZU35 1233 aa11.69□□□□□ -0.54
HDLBP-201ENST00000310931 FAM161AQ3B820 660 aa11.69□□□□□ -0.54
HDLBP-201ENST00000310931 ZHX1Q9UKY1 873 aaPredicted RBP11.69□□□□□ -0.54
HDLBP-201ENST00000310931 DIAPH1O60610 1272 aaKnown RBP11.69□□□□□ -0.54
HDLBP-201ENST00000310931 TAOK2Q9UL54 1235 aa11.69□□□□□ -0.54
HDLBP-201ENST00000310931 FGD1P98174 961 aa11.68□□□□□ -0.54
HDLBP-201ENST00000310931 MAPK8IP3Q9UPT6 1336 aa11.68□□□□□ -0.54
HDLBP-201ENST00000310931 C1orf167Q5SNV9 1468 aa11.68□□□□□ -0.54
HDLBP-201ENST00000310931 FRAT2O75474 233 aaPredicted RBP11.68□□□□□ -0.54
HDLBP-201ENST00000310931 PRDM10Q9NQV6 1147 aa11.68□□□□□ -0.54
HDLBP-201ENST00000310931 SBNO1A3KN83 1393 aa11.68□□□□□ -0.54
HDLBP-201ENST00000310931 MS4A1P11836 297 aa11.67□□□□□ -0.54
HDLBP-201ENST00000310931 MTHFSP49914 203 aa11.67□□□□□ -0.54
HDLBP-201ENST00000310931 RTL1A6NKG5 1358 aa11.67□□□□□ -0.54
HDLBP-201ENST00000310931 ARHGEF10O15013 1369 aa11.67□□□□□ -0.54
HDLBP-201ENST00000310931 CDK12Q9NYV4 1490 aaPredicted RBP11.67□□□□□ -0.54
HDLBP-201ENST00000310931 PHF14O94880 888 aa11.67□□□□□ -0.54
HDLBP-201ENST00000310931 CCAR2Q8N163 923 aaKnown RBP11.67□□□□□ -0.54
HDLBP-201ENST00000310931 PMFBP1Q8TBY8 1022 aa11.67□□□□□ -0.54
HDLBP-201ENST00000310931 PDCL3Q9H2J4 239 aa11.67□□□□□ -0.54
HDLBP-201ENST00000310931 BLMP54132 1417 aaPredicted RBP11.66□□□□□ -0.54
HDLBP-201ENST00000310931 TAF3Q5VWG9 929 aa11.66□□□□□ -0.54
HDLBP-201ENST00000310931 SMG6Q86US8 1419 aaKnown RBP11.66□□□□□ -0.54
HDLBP-201ENST00000310931 NUTM2FA1L443 756 aa11.66□□□□□ -0.54
HDLBP-201ENST00000310931 ABTB2Q8N961 1025 aa11.66□□□□□ -0.54
HDLBP-201ENST00000310931 DIAPH3Q9NSV4 1193 aa11.66□□□□□ -0.54
HDLBP-201ENST00000310931 STRCQ7RTU9 1775 aa11.66□□□□□ -0.54
HDLBP-201ENST00000310931 KCNJ4P48050 445 aa11.66□□□□□ -0.54
HDLBP-201ENST00000310931 NLRP6P59044 892 aa11.66□□□□□ -0.54
HDLBP-201ENST00000310931 GNL2Q13823 731 aaKnown RBP11.66□□□□□ -0.54
HDLBP-201ENST00000310931 RUNDC1Q96C34 613 aa11.66□□□□□ -0.54
HDLBP-201ENST00000310931 ESPNB1AK53 854 aa11.65□□□□□ -0.54
HDLBP-201ENST00000310931 CWC15Q9P013 229 aaKnown RBP11.65□□□□□ -0.54
HDLBP-201ENST00000310931 NRKQ7Z2Y5 1582 aa11.65□□□□□ -0.54
HDLBP-201ENST00000310931 MCCP23508 829 aa11.65□□□□□ -0.54
HDLBP-201ENST00000310931 LMOD3Q0VAK6 560 aa11.65□□□□□ -0.54
HDLBP-201ENST00000310931 OVOS2A0A0J9YW53 1432 aa11.65□□□□□ -0.54
HDLBP-201ENST00000310931 OVOS2Q6IE36 1432 aa11.65□□□□□ -0.54
HDLBP-201ENST00000310931 SSH2Q76I76 1423 aa11.65□□□□□ -0.54
HDLBP-201ENST00000310931 NME9Q86XW9 330 aa11.65□□□□□ -0.55
HDLBP-201ENST00000310931 MST1RQ04912 1400 aa11.64□□□□□ -0.55
HDLBP-201ENST00000310931 KRT28Q7Z3Y7 464 aa11.64□□□□□ -0.55
HDLBP-201ENST00000310931 AMPHP49418 695 aa11.64□□□□□ -0.55
HDLBP-201ENST00000310931 CHMP5Q9NZZ3 219 aa11.64□□□□□ -0.55
HDLBP-201ENST00000310931 USP54Q70EL1 1684 aa11.64□□□□□ -0.55
HDLBP-201ENST00000310931 NASPP49321 788 aaPredicted RBP11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms