RNA–Protein interactions for RNA: ENST00000310645.9

COL6A2-202, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,446 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-202ENST00000310645 ZFYVE16Q7Z3T8 1539 aa18.05■□□□□ 0.48
COL6A2-202ENST00000310645 NSFL1CQ9UNZ2 370 aaKnown RBP18.05■□□□□ 0.48
COL6A2-202ENST00000310645 A0A1W2PP64 1363 aa18.05■□□□□ 0.48
COL6A2-202ENST00000310645 IBTKQ9P2D0 1353 aaPredicted RBP18.05■□□□□ 0.48
COL6A2-202ENST00000310645 SHROOM2Q13796 1616 aa18.04■□□□□ 0.48
COL6A2-202ENST00000310645 NOL8Q76FK4 1167 aaKnown RBP18.04■□□□□ 0.48
COL6A2-202ENST00000310645 USP26Q9BXU7 913 aa18.04■□□□□ 0.48
COL6A2-202ENST00000310645 SMARCA5O60264 1052 aaPredicted RBP18.04■□□□□ 0.48
COL6A2-202ENST00000310645 KIF1BO60333 1816 aa18.04■□□□□ 0.48
COL6A2-202ENST00000310645 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.04■□□□□ 0.48
COL6A2-202ENST00000310645 PHACTR3Q96KR7 559 aa18.04■□□□□ 0.48
COL6A2-202ENST00000310645 TMEM63CQ9P1W3 806 aa18.04■□□□□ 0.48
COL6A2-202ENST00000310645 ADGRL1O94910 1474 aa18.03■□□□□ 0.48
COL6A2-202ENST00000310645 NSD2O96028 1365 aa18.03■□□□□ 0.48
COL6A2-202ENST00000310645 ZKSCAN5Q9Y2L8 839 aa18.03■□□□□ 0.48
COL6A2-202ENST00000310645 ST18O60284 1047 aa18.03■□□□□ 0.48
COL6A2-202ENST00000310645 ADGRB2O60241 1585 aa18.03■□□□□ 0.48
COL6A2-202ENST00000310645 DNTTIP2Q5QJE6 756 aaKnown RBP18.03■□□□□ 0.48
COL6A2-202ENST00000310645 QRICH2Q9H0J4 1663 aa18.02■□□□□ 0.48
COL6A2-202ENST00000310645 PRDM10Q9NQV6 1147 aa18.02■□□□□ 0.48
COL6A2-202ENST00000310645 CFAP74Q9C0B2 1584 aa18.02■□□□□ 0.47
COL6A2-202ENST00000310645 ZNF500O60304 480 aaPredicted RBP18.02■□□□□ 0.47
COL6A2-202ENST00000310645 TTC22Q5TAA0 569 aa18.01■□□□□ 0.47
COL6A2-202ENST00000310645 HS1BP3Q53T59 392 aa18.01■□□□□ 0.47
COL6A2-202ENST00000310645 INTS3Q68E01 1043 aaKnown RBP18.01■□□□□ 0.47
COL6A2-202ENST00000310645 PDLIM2Q96JY6 352 aa18.01■□□□□ 0.47
COL6A2-202ENST00000310645 ZDHHC9Q9Y397 364 aa18.01■□□□□ 0.47
COL6A2-202ENST00000310645 CYP2E1P05181 493 aaPredicted RBP18■□□□□ 0.47
COL6A2-202ENST00000310645 TWISTNBQ3B726 338 aaPredicted RBP18■□□□□ 0.47
COL6A2-202ENST00000310645 TERF2IPQ9NYB0 399 aa18■□□□□ 0.47
COL6A2-202ENST00000310645 MROH2AA6NES4 1674 aa18■□□□□ 0.47
COL6A2-202ENST00000310645 TERF1P54274 439 aa18■□□□□ 0.47
COL6A2-202ENST00000310645 FCHSD2O94868 740 aa17.99■□□□□ 0.47
COL6A2-202ENST00000310645 LRSAM1Q6UWE0 723 aa17.99■□□□□ 0.47
COL6A2-202ENST00000310645 MBIPQ9NS73 344 aa17.99■□□□□ 0.47
COL6A2-202ENST00000310645 SDSP20132 328 aa17.99■□□□□ 0.47
COL6A2-202ENST00000310645 CASC1Q6TDU7 716 aa17.99■□□□□ 0.47
COL6A2-202ENST00000310645 C8orf58Q8NAV2 365 aa17.99■□□□□ 0.47
COL6A2-202ENST00000310645 MAP7D2Q96T17 732 aa17.99■□□□□ 0.47
COL6A2-202ENST00000310645 CWC22Q9HCG8 908 aaKnown RBP17.99■□□□□ 0.47
COL6A2-202ENST00000310645 ATP7AQ04656 1500 aa17.99■□□□□ 0.47
COL6A2-202ENST00000310645 MYO3AQ8NEV4 1616 aa17.98■□□□□ 0.47
COL6A2-202ENST00000310645 CCDC39Q9UFE4 941 aa17.98■□□□□ 0.47
COL6A2-202ENST00000310645 CSPP1Q1MSJ5 1256 aa17.98■□□□□ 0.47
COL6A2-202ENST00000310645 JARID2Q92833 1246 aaPredicted RBP17.98■□□□□ 0.47
COL6A2-202ENST00000310645 NEK4P51957 841 aa17.97■□□□□ 0.47
COL6A2-202ENST00000310645 DCTN1Q14203 1278 aa17.97■□□□□ 0.47
COL6A2-202ENST00000310645 ARHGAP45Q92619 1136 aa17.97■□□□□ 0.47
COL6A2-202ENST00000310645 NRXN1Q9ULB1 1477 aa17.97■□□□□ 0.47
COL6A2-202ENST00000310645 TSC1Q92574 1164 aa17.97■□□□□ 0.47
COL6A2-202ENST00000310645 GNAI1P63096 354 aa17.96■□□□□ 0.47
COL6A2-202ENST00000310645 FAM83GA6ND36 823 aa17.96■□□□□ 0.47
COL6A2-202ENST00000310645 NFE2L2Q16236 605 aa17.96■□□□□ 0.47
COL6A2-202ENST00000310645 DCTPP1Q9H773 170 aa17.96■□□□□ 0.47
COL6A2-202ENST00000310645 DEPDC5O75140 1603 aa17.95■□□□□ 0.46
COL6A2-202ENST00000310645 ZNF428Q96B54 188 aa17.95■□□□□ 0.46
COL6A2-202ENST00000310645 ZNF830Q96NB3 372 aaPredicted RBP17.95■□□□□ 0.46
COL6A2-202ENST00000310645 API5Q9BZZ5 524 aaKnown RBP17.95■□□□□ 0.46
COL6A2-202ENST00000310645 VGFO15240 615 aaPredicted RBP17.95■□□□□ 0.46
COL6A2-202ENST00000310645 GDPD2Q9HCC8 539 aa17.95■□□□□ 0.46
COL6A2-202ENST00000310645 SASS6Q6UVJ0 657 aa17.95■□□□□ 0.46
COL6A2-202ENST00000310645 HDGFL2Q7Z4V5 671 aaPredicted RBP17.95■□□□□ 0.46
COL6A2-202ENST00000310645 CABP1Q9NZU7 370 aa17.95■□□□□ 0.46
COL6A2-202ENST00000310645 ABCC4O15439 1325 aa17.95■□□□□ 0.46
COL6A2-202ENST00000310645 FANCAO15360 1455 aa17.95■□□□□ 0.46
COL6A2-202ENST00000310645 TULP4Q9NRJ4 1543 aa17.95■□□□□ 0.46
COL6A2-202ENST00000310645 PRDM4Q9UKN5 801 aa17.94■□□□□ 0.46
COL6A2-202ENST00000310645 MED14O60244 1454 aa17.94■□□□□ 0.46
COL6A2-202ENST00000310645 DYNC1I1O14576 645 aa17.94■□□□□ 0.46
COL6A2-202ENST00000310645 PRAM1Q96QH2 718 aa17.94■□□□□ 0.46
COL6A2-202ENST00000310645 ADGRB1O14514 1584 aa17.93■□□□□ 0.46
COL6A2-202ENST00000310645 REC8O95072 547 aa17.93■□□□□ 0.46
COL6A2-202ENST00000310645 BRPF1P55201 1214 aaPredicted RBP17.93■□□□□ 0.46
COL6A2-202ENST00000310645 VWDEQ8N2E2 1590 aa17.93■□□□□ 0.46
COL6A2-202ENST00000310645 ZHX1Q9UKY1 873 aaPredicted RBP17.92■□□□□ 0.46
COL6A2-202ENST00000310645 SETBP1Q9Y6X0 1596 aa17.92■□□□□ 0.46
COL6A2-202ENST00000310645 KRT24Q2M2I5 525 aa17.92■□□□□ 0.46
COL6A2-202ENST00000310645 COL3A1P02461 1466 aaPredicted RBP17.92■□□□□ 0.46
COL6A2-202ENST00000310645 ZCCHC11Q5TAX3 1644 aaKnown RBP17.92■□□□□ 0.46
COL6A2-202ENST00000310645 TSHZ3Q63HK5 1081 aa17.92■□□□□ 0.46
COL6A2-202ENST00000310645 CFAP44Q96MT7 982 aa17.92■□□□□ 0.46
COL6A2-202ENST00000310645 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.92■□□□□ 0.46
COL6A2-202ENST00000310645 EFCAB6Q5THR3 1501 aa17.91■□□□□ 0.46
COL6A2-202ENST00000310645 FAM177BA6PVY3 158 aa17.91■□□□□ 0.46
COL6A2-202ENST00000310645 TMX3Q96JJ7 454 aa17.91■□□□□ 0.46
COL6A2-202ENST00000310645 PUS7Q96PZ0 661 aaKnown RBP17.91■□□□□ 0.46
COL6A2-202ENST00000310645 TSPY26PQ9H489 355 aa17.91■□□□□ 0.46
COL6A2-202ENST00000310645 POLKQ9UBT6 870 aa17.91■□□□□ 0.46
COL6A2-202ENST00000310645 PLCB2Q00722 1185 aa17.91■□□□□ 0.46
COL6A2-202ENST00000310645 EMILIN1Q9Y6C2 1016 aa17.91■□□□□ 0.46
COL6A2-202ENST00000310645 USP32Q8NFA0 1604 aa17.91■□□□□ 0.46
COL6A2-202ENST00000310645 KIAA2012Q0VF49 1180 aa17.91■□□□□ 0.46
COL6A2-202ENST00000310645 MCM5P33992 734 aa17.9■□□□□ 0.46
COL6A2-202ENST00000310645 C17orf53Q8N3J3 647 aaPredicted RBP17.9■□□□□ 0.46
COL6A2-202ENST00000310645 IFT57Q9NWB7 429 aa17.9■□□□□ 0.46
COL6A2-202ENST00000310645 ERC2O15083 957 aa17.9■□□□□ 0.46
COL6A2-202ENST00000310645 MBD3O95983 291 aa17.9■□□□□ 0.46
COL6A2-202ENST00000310645 PTCH1Q13635 1447 aa17.9■□□□□ 0.46
COL6A2-202ENST00000310645 IFT172Q9UG01 1749 aa17.9■□□□□ 0.46
COL6A2-202ENST00000310645 NPATQ14207 1427 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms