RNA–Protein interactions for RNA: ENST00000309246.9

TPT1-201, Transcript of tumor protein, translationally-controlled 1, humanhuman

TSL 1 (best) BASIC

Gene TPT1, Length 1,008 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPT1-201ENST00000309246 PEAK1Q9H792 1746 aa17.51■□□□□ 0.39
TPT1-201ENST00000309246 THRAP3Q9Y2W1 955 aaKnown RBP17.5■□□□□ 0.39
TPT1-201ENST00000309246 ROCK2O75116 1388 aaKnown RBP17.5■□□□□ 0.39
TPT1-201ENST00000309246 NEUROD1Q13562 356 aa17.49■□□□□ 0.39
TPT1-201ENST00000309246 AATKQ6ZMQ8 1374 aa17.49■□□□□ 0.39
TPT1-201ENST00000309246 PARD3Q8TEW0 1356 aa17.49■□□□□ 0.39
TPT1-201ENST00000309246 MON2Q7Z3U7 1717 aa17.48■□□□□ 0.39
TPT1-201ENST00000309246 CPSF1Q10570 1443 aaKnown RBP17.47■□□□□ 0.39
TPT1-201ENST00000309246 RGPD3A6NKT7 1758 aaPredicted RBP17.45■□□□□ 0.38
TPT1-201ENST00000309246 RGPD4Q7Z3J3 1758 aa17.45■□□□□ 0.38
TPT1-201ENST00000309246 OVOS2A0A0G2JMS6 1433 aa17.45■□□□□ 0.38
TPT1-201ENST00000309246 OVOS2A0A0J9YW53 1432 aa17.45■□□□□ 0.38
TPT1-201ENST00000309246 OVOS2Q6IE36 1432 aa17.45■□□□□ 0.38
TPT1-201ENST00000309246 TTC21BQ7Z4L5 1316 aa17.45■□□□□ 0.38
TPT1-201ENST00000309246 SOX12O15370 315 aa17.44■□□□□ 0.38
TPT1-201ENST00000309246 TOM1L2Q6ZVM7 507 aa17.44■□□□□ 0.38
TPT1-201ENST00000309246 NFAT5O94916 1531 aa17.43■□□□□ 0.38
TPT1-201ENST00000309246 AXIN2Q9Y2T1 843 aa17.43■□□□□ 0.38
TPT1-201ENST00000309246 ZNF692Q9BU19 519 aaPredicted RBP17.42■□□□□ 0.38
TPT1-201ENST00000309246 LTN1O94822 1766 aa17.42■□□□□ 0.38
TPT1-201ENST00000309246 WDR17Q8IZU2 1322 aa17.42■□□□□ 0.38
TPT1-201ENST00000309246 KTN1Q86UP2 1357 aaKnown RBP17.41■□□□□ 0.38
TPT1-201ENST00000309246 SLC4A2P04920 1241 aa17.41■□□□□ 0.38
TPT1-201ENST00000309246 DDB1Q16531 1140 aa17.41■□□□□ 0.38
TPT1-201ENST00000309246 ARHGEF25Q86VW2 580 aa17.41■□□□□ 0.38
TPT1-201ENST00000309246 USP54Q70EL1 1684 aa17.41■□□□□ 0.38
TPT1-201ENST00000309246 TTC21AQ8NDW8 1320 aa17.41■□□□□ 0.38
TPT1-201ENST00000309246 NBPF14Q5TI25 921 aa17.4■□□□□ 0.38
TPT1-201ENST00000309246 KCNH5Q8NCM2 988 aa17.4■□□□□ 0.38
TPT1-201ENST00000309246 C11orf95C9JLR9 678 aaPredicted RBP17.39■□□□□ 0.37
TPT1-201ENST00000309246 CSB-PGBD3P0DP91 1061 aa17.38■□□□□ 0.37
TPT1-201ENST00000309246 SBNO2Q9Y2G9 1366 aa17.38■□□□□ 0.37
TPT1-201ENST00000309246 ABCC6O95255 1503 aa17.37■□□□□ 0.37
TPT1-201ENST00000309246 PTF1AQ7RTS3 328 aa17.37■□□□□ 0.37
TPT1-201ENST00000309246 CD163L1Q9NR16 1453 aa17.37■□□□□ 0.37
TPT1-201ENST00000309246 MARCH10Q8NA82 808 aaPredicted RBP17.36■□□□□ 0.37
TPT1-201ENST00000309246 CASZ1Q86V15 1759 aa17.35■□□□□ 0.37
TPT1-201ENST00000309246 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.35■□□□□ 0.37
TPT1-201ENST00000309246 CDCA7Q9BWT1 371 aaPredicted RBP17.35■□□□□ 0.37
TPT1-201ENST00000309246 CARD10Q9BWT7 1032 aa17.35■□□□□ 0.37
TPT1-201ENST00000309246 CARD11Q9BXL7 1154 aa17.35■□□□□ 0.37
TPT1-201ENST00000309246 RNF39Q9H2S5 420 aa17.35■□□□□ 0.37
TPT1-201ENST00000309246 BCL11BQ9C0K0 894 aaPredicted RBP17.34■□□□□ 0.37
TPT1-201ENST00000309246 USP31Q70CQ4 1352 aa17.33■□□□□ 0.36
TPT1-201ENST00000309246 CCDC7Q96M83 1385 aa17.33■□□□□ 0.36
TPT1-201ENST00000309246 PLSCR1O15162 318 aa17.33■□□□□ 0.36
TPT1-201ENST00000309246 NME9Q86XW9 330 aa17.33■□□□□ 0.36
TPT1-201ENST00000309246 NHSQ6T4R5 1651 aa17.32■□□□□ 0.36
TPT1-201ENST00000309246 BCL9O00512 1426 aa17.32■□□□□ 0.36
TPT1-201ENST00000309246 TNS2Q63HR2 1409 aa17.32■□□□□ 0.36
TPT1-201ENST00000309246 KAT6BQ8WYB5 2073 aa17.32■□□□□ 0.36
TPT1-201ENST00000309246 TMC1Q8TDI8 760 aa17.32■□□□□ 0.36
TPT1-201ENST00000309246 ANO8Q9HCE9 1232 aaPredicted RBP17.32■□□□□ 0.36
TPT1-201ENST00000309246 SPON1Q9HCB6 807 aa17.31■□□□□ 0.36
TPT1-201ENST00000309246 TONSLQ96HA7 1378 aa17.3■□□□□ 0.36
TPT1-201ENST00000309246 KCNQ2O43526 872 aa17.3■□□□□ 0.36
TPT1-201ENST00000309246 EXOC5O00471 708 aa17.29■□□□□ 0.36
TPT1-201ENST00000309246 HDGFL2Q7Z4V5 671 aaPredicted RBP17.29■□□□□ 0.36
TPT1-201ENST00000309246 SLC12A5Q9H2X9 1139 aa17.29■□□□□ 0.36
TPT1-201ENST00000309246 FOXD4L1Q9NU39 408 aa17.29■□□□□ 0.36
TPT1-201ENST00000309246 PPP1R1BQ9UD71 204 aaPredicted RBP17.29■□□□□ 0.36
TPT1-201ENST00000309246 EDC4Q6P2E9 1401 aaKnown RBP17.29■□□□□ 0.36
TPT1-201ENST00000309246 BTAF1O14981 1849 aa17.28■□□□□ 0.36
TPT1-201ENST00000309246 ERBB3P21860 1342 aa17.28■□□□□ 0.36
TPT1-201ENST00000309246 PROM2Q8N271 834 aa17.28■□□□□ 0.36
TPT1-201ENST00000309246 A0A1W2PP64 1363 aa17.28■□□□□ 0.36
TPT1-201ENST00000309246 NLRP2Q9NX02 1062 aa17.27■□□□□ 0.36
TPT1-201ENST00000309246 MYOM1P52179 1685 aa17.26■□□□□ 0.35
TPT1-201ENST00000309246 FAM208AQ9UK61 1670 aaKnown RBP17.26■□□□□ 0.35
TPT1-201ENST00000309246 TXNRD1Q16881 649 aa17.25■□□□□ 0.35
TPT1-201ENST00000309246 PDGFDQ9GZP0 370 aaPredicted RBP17.25■□□□□ 0.35
TPT1-201ENST00000309246 TERF2IPQ9NYB0 399 aa17.25■□□□□ 0.35
TPT1-201ENST00000309246 RGPD2P0DJD1 1756 aa17.25■□□□□ 0.35
TPT1-201ENST00000309246 ANKRD24Q8TF21 1146 aa17.24■□□□□ 0.35
TPT1-201ENST00000309246 ACSBG1Q96GR2 724 aa17.24■□□□□ 0.35
TPT1-201ENST00000309246 NINLQ9Y2I6 1382 aa17.24■□□□□ 0.35
TPT1-201ENST00000309246 IL2RBP14784 551 aa17.23■□□□□ 0.35
TPT1-201ENST00000309246 PAPPAQ13219 1627 aa17.22■□□□□ 0.35
TPT1-201ENST00000309246 ZBTB7AO95365 584 aa17.22■□□□□ 0.35
TPT1-201ENST00000309246 STK32BQ9NY57 414 aa17.22■□□□□ 0.35
TPT1-201ENST00000309246 U3KPZ7 1027 aaPredicted RBP17.21■□□□□ 0.35
TPT1-201ENST00000309246 C1QBPQ07021 282 aaKnown RBP17.2■□□□□ 0.34
TPT1-201ENST00000309246 PUS7Q96PZ0 661 aaKnown RBP17.2■□□□□ 0.34
TPT1-201ENST00000309246 TESK2Q96S53 571 aa17.2■□□□□ 0.34
TPT1-201ENST00000309246 DOT1LQ8TEK3 1739 aa17.19■□□□□ 0.34
TPT1-201ENST00000309246 SHANK3Q9BYB0 1731 aa17.19■□□□□ 0.34
TPT1-201ENST00000309246 ST20-MTHFSA0A0A6YYL1 179 aa17.19■□□□□ 0.34
TPT1-201ENST00000309246 SLC15A2Q16348 729 aa17.19■□□□□ 0.34
TPT1-201ENST00000309246 YY1P25490 414 aa17.18■□□□□ 0.34
TPT1-201ENST00000309246 IP6K1Q92551 441 aa17.18■□□□□ 0.34
TPT1-201ENST00000309246 LTV1Q96GA3 475 aaPredicted RBP17.18■□□□□ 0.34
TPT1-201ENST00000309246 ATF5Q9Y2D1 282 aaPredicted RBP17.18■□□□□ 0.34
TPT1-201ENST00000309246 PTGER2P43116 358 aa17.17■□□□□ 0.34
TPT1-201ENST00000309246 KIF20BQ96Q89 1820 aa17.17■□□□□ 0.34
TPT1-201ENST00000309246 TUBGCP6Q96RT7 1819 aa17.16■□□□□ 0.34
TPT1-201ENST00000309246 MAP3K19Q56UN5 1328 aa17.16■□□□□ 0.34
TPT1-201ENST00000309246 FBLN1P23142 703 aa17.15■□□□□ 0.34
TPT1-201ENST00000309246 COG3Q96JB2 828 aa17.15■□□□□ 0.34
TPT1-201ENST00000309246 QSER1Q2KHR3 1735 aa17.15■□□□□ 0.34
TPT1-201ENST00000309246 DDX54Q8TDD1 881 aaKnown RBP17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms