RNA–Protein interactions for RNA: ENST00000305366.7

TM4SF1-201, Transcript of transmembrane 4 L six family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM4SF1, Length 1,771 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-201ENST00000305366 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.72□□□□□ -0.69
TM4SF1-201ENST00000305366 AXIN2Q9Y2T1 843 aa10.72□□□□□ -0.69
TM4SF1-201ENST00000305366 ROCK2O75116 1388 aaKnown RBP10.72□□□□□ -0.69
TM4SF1-201ENST00000305366 HSPA5P11021 654 aaKnown RBP10.72□□□□□ -0.69
TM4SF1-201ENST00000305366 EIF4G2P78344 907 aaKnown RBP eCLIP10.72□□□□□ -0.69
TM4SF1-201ENST00000305366 NBPF14Q5TI25 921 aa10.72□□□□□ -0.69
TM4SF1-201ENST00000305366 THRAP3Q9Y2W1 955 aaKnown RBP10.72□□□□□ -0.69
TM4SF1-201ENST00000305366 CAMTA1Q9Y6Y1 1673 aa10.72□□□□□ -0.69
TM4SF1-201ENST00000305366 CPDO75976 1380 aa10.71□□□□□ -0.69
TM4SF1-201ENST00000305366 TMC1Q8TDI8 760 aa10.71□□□□□ -0.69
TM4SF1-201ENST00000305366 NRAPQ86VF7 1730 aa10.7□□□□□ -0.7
TM4SF1-201ENST00000305366 ARHGEF28Q8N1W1 1705 aaKnown RBP10.7□□□□□ -0.7
TM4SF1-201ENST00000305366 DDB1Q16531 1140 aa10.7□□□□□ -0.7
TM4SF1-201ENST00000305366 PTF1AQ7RTS3 328 aa10.7□□□□□ -0.7
TM4SF1-201ENST00000305366 ZNF692Q9BU19 519 aaPredicted RBP10.7□□□□□ -0.7
TM4SF1-201ENST00000305366 TTC21BQ7Z4L5 1316 aa10.7□□□□□ -0.7
TM4SF1-201ENST00000305366 TPRNQ4KMQ1 711 aa10.7□□□□□ -0.7
TM4SF1-201ENST00000305366 USP6P35125 1406 aa10.69□□□□□ -0.7
TM4SF1-201ENST00000305366 WASHC2AQ641Q2 1341 aa10.69□□□□□ -0.7
TM4SF1-201ENST00000305366 CARD11Q9BXL7 1154 aa10.69□□□□□ -0.7
TM4SF1-201ENST00000305366 AATKQ6ZMQ8 1374 aa10.68□□□□□ -0.7
TM4SF1-201ENST00000305366 CRB1P82279 1406 aa10.68□□□□□ -0.7
TM4SF1-201ENST00000305366 ARHGEF25Q86VW2 580 aa10.67□□□□□ -0.7
TM4SF1-201ENST00000305366 KLHL34Q8N239 644 aa10.67□□□□□ -0.7
TM4SF1-201ENST00000305366 KCNH5Q8NCM2 988 aa10.67□□□□□ -0.7
TM4SF1-201ENST00000305366 PODXL2Q9NZ53 605 aa10.67□□□□□ -0.7
TM4SF1-201ENST00000305366 PPP1R1BQ9UD71 204 aaPredicted RBP10.67□□□□□ -0.7
TM4SF1-201ENST00000305366 KTN1Q86UP2 1357 aaKnown RBP10.67□□□□□ -0.7
TM4SF1-201ENST00000305366 COL5A2P05997 1499 aaPredicted RBP10.67□□□□□ -0.7
TM4SF1-201ENST00000305366 NME9Q86XW9 330 aa10.67□□□□□ -0.7
TM4SF1-201ENST00000305366 MARCH10Q8NA82 808 aaPredicted RBP10.67□□□□□ -0.7
TM4SF1-201ENST00000305366 BCL11BQ9C0K0 894 aaPredicted RBP10.67□□□□□ -0.7
TM4SF1-201ENST00000305366 EXOC5O00471 708 aa10.66□□□□□ -0.7
TM4SF1-201ENST00000305366 SLC12A5Q9H2X9 1139 aa10.66□□□□□ -0.7
TM4SF1-201ENST00000305366 NLRP2Q9NX02 1062 aa10.66□□□□□ -0.7
TM4SF1-201ENST00000305366 WDR17Q8IZU2 1322 aa10.66□□□□□ -0.7
TM4SF1-201ENST00000305366 BRD4O60885 1362 aaPredicted RBP10.66□□□□□ -0.7
TM4SF1-201ENST00000305366 CCDC7Q96M83 1385 aa10.66□□□□□ -0.7
TM4SF1-201ENST00000305366 THSD7AQ9UPZ6 1657 aa10.66□□□□□ -0.7
TM4SF1-201ENST00000305366 DISP2A7MBM2 1401 aa10.66□□□□□ -0.7
TM4SF1-201ENST00000305366 NRKQ7Z2Y5 1582 aa10.65□□□□□ -0.7
TM4SF1-201ENST00000305366 PHRF1Q9P1Y6 1649 aaKnown RBP10.65□□□□□ -0.71
TM4SF1-201ENST00000305366 ACSBG1Q96GR2 724 aa10.65□□□□□ -0.71
TM4SF1-201ENST00000305366 CARD10Q9BWT7 1032 aa10.65□□□□□ -0.71
TM4SF1-201ENST00000305366 ITSN1Q15811 1721 aa10.64□□□□□ -0.71
TM4SF1-201ENST00000305366 CRYBG1Q9Y4K1 1723 aa10.64□□□□□ -0.71
TM4SF1-201ENST00000305366 HDGFL2Q7Z4V5 671 aaPredicted RBP10.64□□□□□ -0.71
TM4SF1-201ENST00000305366 SPON1Q9HCB6 807 aa10.64□□□□□ -0.71
TM4SF1-201ENST00000305366 TTC21AQ8NDW8 1320 aa10.64□□□□□ -0.71
TM4SF1-201ENST00000305366 KCNQ2O43526 872 aa10.63□□□□□ -0.71
TM4SF1-201ENST00000305366 LTV1Q96GA3 475 aaPredicted RBP10.63□□□□□ -0.71
TM4SF1-201ENST00000305366 PDGFDQ9GZP0 370 aaPredicted RBP10.63□□□□□ -0.71
TM4SF1-201ENST00000305366 PARD3Q8TEW0 1356 aa10.63□□□□□ -0.71
TM4SF1-201ENST00000305366 OVOS2A0A0G2JMS6 1433 aa10.62□□□□□ -0.71
TM4SF1-201ENST00000305366 OVOS2A0A0J9YW53 1432 aa10.62□□□□□ -0.71
TM4SF1-201ENST00000305366 C11orf95C9JLR9 678 aaPredicted RBP10.62□□□□□ -0.71
TM4SF1-201ENST00000305366 ZBTB7AO95365 584 aa10.62□□□□□ -0.71
TM4SF1-201ENST00000305366 OVOS2Q6IE36 1432 aa10.62□□□□□ -0.71
TM4SF1-201ENST00000305366 PROM2Q8N271 834 aa10.62□□□□□ -0.71
TM4SF1-201ENST00000305366 TOPAZ1Q8N9V7 1692 aa10.62□□□□□ -0.71
TM4SF1-201ENST00000305366 CDCA7Q9BWT1 371 aaPredicted RBP10.62□□□□□ -0.71
TM4SF1-201ENST00000305366 ANO8Q9HCE9 1232 aaPredicted RBP10.62□□□□□ -0.71
TM4SF1-201ENST00000305366 KIAA1210Q9ULL0 1709 aa10.62□□□□□ -0.71
TM4SF1-201ENST00000305366 CPSF1Q10570 1443 aaKnown RBP10.62□□□□□ -0.71
TM4SF1-201ENST00000305366 PLSCR1O15162 318 aa10.62□□□□□ -0.71
TM4SF1-201ENST00000305366 ATF5Q9Y2D1 282 aaPredicted RBP10.62□□□□□ -0.71
TM4SF1-201ENST00000305366 FBLN1P23142 703 aa10.61□□□□□ -0.71
TM4SF1-201ENST00000305366 ANKRD24Q8TF21 1146 aa10.61□□□□□ -0.71
TM4SF1-201ENST00000305366 RGPD1P0DJD0 1748 aa10.61□□□□□ -0.71
TM4SF1-201ENST00000305366 NEFLP07196 543 aa10.6□□□□□ -0.71
TM4SF1-201ENST00000305366 QRICH2Q9H0J4 1663 aa10.6□□□□□ -0.71
TM4SF1-201ENST00000305366 LMO7Q8WWI1 1683 aa10.6□□□□□ -0.71
TM4SF1-201ENST00000305366 FKBP8Q14318 412 aa10.6□□□□□ -0.71
TM4SF1-201ENST00000305366 TXNRD1Q16881 649 aa10.6□□□□□ -0.71
TM4SF1-201ENST00000305366 DDX54Q8TDD1 881 aaKnown RBP10.6□□□□□ -0.71
TM4SF1-201ENST00000305366 STK32BQ9NY57 414 aa10.6□□□□□ -0.71
TM4SF1-201ENST00000305366 TERF2IPQ9NYB0 399 aa10.6□□□□□ -0.71
TM4SF1-201ENST00000305366 ST20-MTHFSA0A0A6YYL1 179 aa10.59□□□□□ -0.71
TM4SF1-201ENST00000305366 SLIT3O75094 1523 aa10.59□□□□□ -0.71
TM4SF1-201ENST00000305366 KIF7Q2M1P5 1343 aa10.58□□□□□ -0.72
TM4SF1-201ENST00000305366 IL2RBP14784 551 aa10.58□□□□□ -0.72
TM4SF1-201ENST00000305366 YY1P25490 414 aa10.58□□□□□ -0.72
TM4SF1-201ENST00000305366 PLCB2Q00722 1185 aa10.58□□□□□ -0.72
TM4SF1-201ENST00000305366 PRKRIP1Q9H875 184 aaPredicted RBP10.58□□□□□ -0.72
TM4SF1-201ENST00000305366 TSHZ2Q9NRE2 1034 aa10.57□□□□□ -0.72
TM4SF1-201ENST00000305366 TNS1Q9HBL0 1735 aaKnown RBP10.57□□□□□ -0.72
TM4SF1-201ENST00000305366 SBNO2Q9Y2G9 1366 aa10.57□□□□□ -0.72
TM4SF1-201ENST00000305366 LRP5O75197 1615 aa10.57□□□□□ -0.72
TM4SF1-201ENST00000305366 SYTL4Q96C24 671 aaPredicted RBP10.57□□□□□ -0.72
TM4SF1-201ENST00000305366 TRPM1Q7Z4N2 1603 aa10.56□□□□□ -0.72
TM4SF1-201ENST00000305366 ERBB3P21860 1342 aa10.56□□□□□ -0.72
TM4SF1-201ENST00000305366 AMPHP49418 695 aa10.56□□□□□ -0.72
TM4SF1-201ENST00000305366 SLC15A2Q16348 729 aa10.56□□□□□ -0.72
TM4SF1-201ENST00000305366 COG3Q96JB2 828 aa10.56□□□□□ -0.72
TM4SF1-201ENST00000305366 PIK3C2AO00443 1686 aa10.56□□□□□ -0.72
TM4SF1-201ENST00000305366 KCNQ4P56696 695 aa10.55□□□□□ -0.72
TM4SF1-201ENST00000305366 HNRNPUQ00839 825 aaKnown RBP eCLIP10.55□□□□□ -0.72
TM4SF1-201ENST00000305366 USP31Q70CQ4 1352 aa10.55□□□□□ -0.72
TM4SF1-201ENST00000305366 USP47Q96K76 1375 aa10.55□□□□□ -0.72
TM4SF1-201ENST00000305366 IP6K1Q92551 441 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms