RNA–Protein interactions for RNA: ENST00000303406.4

HOXC4-201, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-201ENST00000303406 MARF1Q9Y4F3 1742 aaKnown RBP25.06■■□□□ 1.6
HOXC4-201ENST00000303406 PHACTR3Q96KR7 559 aa25.06■■□□□ 1.6
HOXC4-201ENST00000303406 ARHGEF10O15013 1369 aa25.05■■□□□ 1.6
HOXC4-201ENST00000303406 FLT4P35916 1363 aa25.05■■□□□ 1.6
HOXC4-201ENST00000303406 MS4A1P11836 297 aa25.05■■□□□ 1.6
HOXC4-201ENST00000303406 ZNF428Q96B54 188 aa25.05■■□□□ 1.6
HOXC4-201ENST00000303406 EXOSC9Q06265 439 aaKnown RBP25.04■■□□□ 1.6
HOXC4-201ENST00000303406 DLG5Q8TDM6 1919 aa25.04■■□□□ 1.6
HOXC4-201ENST00000303406 TSR2Q969E8 191 aaKnown RBP25.03■■□□□ 1.6
HOXC4-201ENST00000303406 IFT57Q9NWB7 429 aa25.02■■□□□ 1.6
HOXC4-201ENST00000303406 PHF8Q9UPP1 1060 aa25.02■■□□□ 1.6
HOXC4-201ENST00000303406 MAP3K19Q56UN5 1328 aa25.01■■□□□ 1.59
HOXC4-201ENST00000303406 GNAI1P63096 354 aa25■■□□□ 1.59
HOXC4-201ENST00000303406 ALDH1L2Q3SY69 923 aa25■■□□□ 1.59
HOXC4-201ENST00000303406 ZNF853P0CG23 659 aa24.99■■□□□ 1.59
HOXC4-201ENST00000303406 ZKSCAN2Q63HK3 967 aa24.99■■□□□ 1.59
HOXC4-201ENST00000303406 BRPF1P55201 1214 aaPredicted RBP24.97■■□□□ 1.59
HOXC4-201ENST00000303406 FRAT1Q92837 279 aaPredicted RBP24.97■■□□□ 1.59
HOXC4-201ENST00000303406 CLUAP1Q96AJ1 413 aa24.97■■□□□ 1.59
HOXC4-201ENST00000303406 HSP90AB2PQ58FF8 381 aa24.96■■□□□ 1.59
HOXC4-201ENST00000303406 RTL1A6NKG5 1358 aa24.96■■□□□ 1.59
HOXC4-201ENST00000303406 KDRP35968 1356 aa24.96■■□□□ 1.59
HOXC4-201ENST00000303406 NLRP6P59044 892 aa24.96■■□□□ 1.59
HOXC4-201ENST00000303406 SULT6B1Q6IMI4 303 aa24.96■■□□□ 1.59
HOXC4-201ENST00000303406 PANK1Q8TE04 598 aa24.96■■□□□ 1.59
HOXC4-201ENST00000303406 KIF16BQ96L93 1317 aa24.94■■□□□ 1.58
HOXC4-201ENST00000303406 SMC4Q9NTJ3 1288 aa24.94■■□□□ 1.58
HOXC4-201ENST00000303406 COG6Q9Y2V7 657 aa24.94■■□□□ 1.58
HOXC4-201ENST00000303406 SSH1Q8WYL5 1049 aa24.93■■□□□ 1.58
HOXC4-201ENST00000303406 CFAP44Q96MT7 982 aa24.93■■□□□ 1.58
HOXC4-201ENST00000303406 IGSF1Q8N6C5 1336 aa24.92■■□□□ 1.58
HOXC4-201ENST00000303406 AMPHP49418 695 aa24.91■■□□□ 1.58
HOXC4-201ENST00000303406 KIF1AQ12756 1690 aa24.91■■□□□ 1.58
HOXC4-201ENST00000303406 PHRF1Q9P1Y6 1649 aaKnown RBP24.91■■□□□ 1.58
HOXC4-201ENST00000303406 MVPQ14764 893 aaKnown RBP24.91■■□□□ 1.58
HOXC4-201ENST00000303406 AEBP1Q8IUX7 1158 aa24.91■■□□□ 1.58
HOXC4-201ENST00000303406 DZIP1LQ8IYY4 767 aaKnown RBP24.91■■□□□ 1.58
HOXC4-201ENST00000303406 BCL2L13Q9BXK5 485 aa24.91■■□□□ 1.58
HOXC4-201ENST00000303406 IPO8O15397 1037 aaKnown RBP24.9■■□□□ 1.58
HOXC4-201ENST00000303406 RLBP1P12271 317 aa24.9■■□□□ 1.58
HOXC4-201ENST00000303406 ABTB2Q8N961 1025 aa24.9■■□□□ 1.58
HOXC4-201ENST00000303406 NCOA3Q9Y6Q9 1424 aa24.9■■□□□ 1.58
HOXC4-201ENST00000303406 NFAT5O94916 1531 aa24.88■■□□□ 1.57
HOXC4-201ENST00000303406 ATF7IPQ6VMQ6 1270 aa24.88■■□□□ 1.57
HOXC4-201ENST00000303406 HOXC9P31274 260 aa24.86■■□□□ 1.57
HOXC4-201ENST00000303406 FTSJ3Q8IY81 847 aaKnown RBP24.86■■□□□ 1.57
HOXC4-201ENST00000303406 MBIPQ9NS73 344 aa24.86■■□□□ 1.57
HOXC4-201ENST00000303406 VAMP4O75379 141 aa24.86■■□□□ 1.57
HOXC4-201ENST00000303406 TRIM27P14373 513 aa24.85■■□□□ 1.57
HOXC4-201ENST00000303406 ESCO1Q5FWF5 840 aa24.85■■□□□ 1.57
HOXC4-201ENST00000303406 THUMPD2Q9BTF0 503 aaKnown RBP24.85■■□□□ 1.57
HOXC4-201ENST00000303406 LTN1O94822 1766 aa24.84■■□□□ 1.57
HOXC4-201ENST00000303406 SOX12O15370 315 aa24.84■■□□□ 1.57
HOXC4-201ENST00000303406 HAP1P54257 671 aaPredicted RBP24.84■■□□□ 1.57
HOXC4-201ENST00000303406 KCNH5Q8NCM2 988 aa24.84■■□□□ 1.57
HOXC4-201ENST00000303406 ARHGAP45Q92619 1136 aa24.84■■□□□ 1.57
HOXC4-201ENST00000303406 TNNQ9UQP3 1299 aa24.84■■□□□ 1.57
HOXC4-201ENST00000303406 LAS1LQ9Y4W2 734 aaKnown RBP24.84■■□□□ 1.57
HOXC4-201ENST00000303406 SLIT3O75094 1523 aa24.84■■□□□ 1.57
HOXC4-201ENST00000303406 DCCP43146 1447 aa24.84■■□□□ 1.57
HOXC4-201ENST00000303406 MST1RQ04912 1400 aa24.84■■□□□ 1.57
HOXC4-201ENST00000303406 PAK3O75914 559 aaPredicted RBP24.83■■□□□ 1.57
HOXC4-201ENST00000303406 PSME1Q06323 249 aa24.83■■□□□ 1.57
HOXC4-201ENST00000303406 C14orf37Q86TY3 774 aa24.83■■□□□ 1.57
HOXC4-201ENST00000303406 EYA1Q99502 592 aa24.83■■□□□ 1.57
HOXC4-201ENST00000303406 BACH2Q9BYV9 841 aa24.83■■□□□ 1.57
HOXC4-201ENST00000303406 NOB1Q9ULX3 412 aaKnown RBP24.83■■□□□ 1.57
HOXC4-201ENST00000303406 DDX19BQ9UMR2 479 aa24.83■■□□□ 1.57
HOXC4-201ENST00000303406 TRPM3Q9HCF6 1732 aaPredicted RBP24.82■■□□□ 1.56
HOXC4-201ENST00000303406 PDE4AP27815 886 aa24.82■■□□□ 1.56
HOXC4-201ENST00000303406 PROSER2Q86WR7 435 aaPredicted RBP24.82■■□□□ 1.56
HOXC4-201ENST00000303406 GAS2L2Q8NHY3 880 aa24.82■■□□□ 1.56
HOXC4-201ENST00000303406 HTATSF1O43719 755 aaKnown RBP24.81■■□□□ 1.56
HOXC4-201ENST00000303406 KIAA0232Q92628 1395 aa24.81■■□□□ 1.56
HOXC4-201ENST00000303406 IGHDP01880 384 aa24.81■■□□□ 1.56
HOXC4-201ENST00000303406 MRPL50Q8N5N7 158 aaKnown RBP24.81■■□□□ 1.56
HOXC4-201ENST00000303406 C19orf44Q9H6X5 657 aa24.81■■□□□ 1.56
HOXC4-201ENST00000303406 C1orf167Q5SNV9 1468 aa24.8■■□□□ 1.56
HOXC4-201ENST00000303406 CRB1P82279 1406 aa24.8■■□□□ 1.56
HOXC4-201ENST00000303406 FAM83GA6ND36 823 aa24.8■■□□□ 1.56
HOXC4-201ENST00000303406 CHL1O00533 1208 aa24.8■■□□□ 1.56
HOXC4-201ENST00000303406 RBM33Q96EV2 1170 aaKnown RBP24.8■■□□□ 1.56
HOXC4-201ENST00000303406 LRRC37A3O60309 1634 aa24.79■■□□□ 1.56
HOXC4-201ENST00000303406 IP6K1Q92551 441 aa24.79■■□□□ 1.56
HOXC4-201ENST00000303406 TWISTNBQ3B726 338 aaPredicted RBP24.78■■□□□ 1.56
HOXC4-201ENST00000303406 RWDD1Q9H446 243 aaPredicted RBP24.77■■□□□ 1.56
HOXC4-201ENST00000303406 NUTM2GQ5VZR2 741 aa24.76■■□□□ 1.55
HOXC4-201ENST00000303406 CHMP4BQ9H444 224 aaKnown RBP24.76■■□□□ 1.55
HOXC4-201ENST00000303406 PCDHB15Q9Y5E8 787 aa24.76■■□□□ 1.55
HOXC4-201ENST00000303406 DCTN1Q14203 1278 aa24.76■■□□□ 1.55
HOXC4-201ENST00000303406 MTHFSDQ2M296 383 aaKnown RBP24.76■■□□□ 1.55
HOXC4-201ENST00000303406 TSPYL6Q8N831 410 aa24.75■■□□□ 1.55
HOXC4-201ENST00000303406 USP19O94966 1318 aa24.75■■□□□ 1.55
HOXC4-201ENST00000303406 STRCP1A6NGW2 1772 aa24.74■■□□□ 1.55
HOXC4-201ENST00000303406 ORAI2Q96SN7 254 aa24.74■■□□□ 1.55
HOXC4-201ENST00000303406 C8orf58Q8NAV2 365 aa24.73■■□□□ 1.55
HOXC4-201ENST00000303406 RTF1Q92541 710 aaKnown RBP24.73■■□□□ 1.55
HOXC4-201ENST00000303406 ITPRIPQ8IWB1 547 aa24.72■■□□□ 1.55
HOXC4-201ENST00000303406 TMEM57Q8N5G2 664 aa24.72■■□□□ 1.55
HOXC4-201ENST00000303406 ANP32AP39687 249 aaKnown RBP24.71■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms