RNA–Protein interactions for RNA: ENST00000301019.8

CDT1-201, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDT1, Length 3,240 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-201ENST00000301019 RIOK3O14730 519 aaKnown RBP17.66■□□□□ 0.42
CDT1-201ENST00000301019 U2AF1L5P0DN76 240 aaPredicted RBP17.65■□□□□ 0.42
CDT1-201ENST00000301019 U2AF1Q01081 240 aaKnown RBP eCLIP17.65■□□□□ 0.42
CDT1-201ENST00000301019 LRSAM1Q6UWE0 723 aa17.65■□□□□ 0.42
CDT1-201ENST00000301019 SSH1Q8WYL5 1049 aa17.65■□□□□ 0.42
CDT1-201ENST00000301019 KIF13AQ9H1H9 1805 aa17.65■□□□□ 0.42
CDT1-201ENST00000301019 A2MP01023 1474 aa17.65■□□□□ 0.42
CDT1-201ENST00000301019 CHD1LQ86WJ1 897 aa17.65■□□□□ 0.42
CDT1-201ENST00000301019 IQGAP3Q86VI3 1631 aa17.65■□□□□ 0.42
CDT1-201ENST00000301019 RICTORQ6R327 1708 aa17.64■□□□□ 0.41
CDT1-201ENST00000301019 U2SURPO15042 1029 aaKnown RBP17.64■□□□□ 0.41
CDT1-201ENST00000301019 SMARCA5O60264 1052 aaPredicted RBP17.63■□□□□ 0.41
CDT1-201ENST00000301019 IRX5P78411 483 aaPredicted RBP17.63■□□□□ 0.41
CDT1-201ENST00000301019 ZNF592Q92610 1267 aa17.63■□□□□ 0.41
CDT1-201ENST00000301019 HS1BP3Q53T59 392 aa17.62■□□□□ 0.41
CDT1-201ENST00000301019 CHMP3Q9Y3E7 222 aa17.62■□□□□ 0.41
CDT1-201ENST00000301019 INSRP06213 1382 aa17.62■□□□□ 0.41
CDT1-201ENST00000301019 HCLS1P14317 486 aaPredicted RBP17.62■□□□□ 0.41
CDT1-201ENST00000301019 GADD45BO75293 160 aaPredicted RBP17.62■□□□□ 0.41
CDT1-201ENST00000301019 C16orf71Q8IYS4 520 aaPredicted RBP17.62■□□□□ 0.41
CDT1-201ENST00000301019 ADCY5O95622 1261 aa17.61■□□□□ 0.41
CDT1-201ENST00000301019 PTMSP20962 102 aa17.61■□□□□ 0.41
CDT1-201ENST00000301019 TSPY26PQ9H489 355 aa17.61■□□□□ 0.41
CDT1-201ENST00000301019 ABCA6Q8N139 1617 aa17.61■□□□□ 0.41
CDT1-201ENST00000301019 EIF2AK4Q9P2K8 1649 aaKnown RBP17.61■□□□□ 0.41
CDT1-201ENST00000301019 FRMPD1Q5SYB0 1578 aa17.61■□□□□ 0.41
CDT1-201ENST00000301019 ST7Q9NRC1 585 aa17.6■□□□□ 0.41
CDT1-201ENST00000301019 DEPDC5O75140 1603 aa17.6■□□□□ 0.41
CDT1-201ENST00000301019 UHRF1BP1Q6BDS2 1440 aa17.6■□□□□ 0.41
CDT1-201ENST00000301019 MORC1Q86VD1 984 aa17.6■□□□□ 0.41
CDT1-201ENST00000301019 ZDHHC9Q9Y397 364 aa17.6■□□□□ 0.41
CDT1-201ENST00000301019 LARP6Q9BRS8 491 aaKnown RBP17.6■□□□□ 0.41
CDT1-201ENST00000301019 NCOA3Q9Y6Q9 1424 aa17.59■□□□□ 0.41
CDT1-201ENST00000301019 DNAJC5Q9H3Z4 198 aa17.59■□□□□ 0.41
CDT1-201ENST00000301019 CCDC144AA2RUR9 1427 aa17.59■□□□□ 0.41
CDT1-201ENST00000301019 YEATS2Q9ULM3 1422 aa17.59■□□□□ 0.41
CDT1-201ENST00000301019 KANK1Q14678 1352 aa17.59■□□□□ 0.41
CDT1-201ENST00000301019 TMX1Q9H3N1 280 aa17.59■□□□□ 0.41
CDT1-201ENST00000301019 PYCARDQ9ULZ3 195 aa17.59■□□□□ 0.41
CDT1-201ENST00000301019 C16orf45Q96MC5 204 aaPredicted RBP17.59■□□□□ 0.41
CDT1-201ENST00000301019 CARD14Q9BXL6 1004 aa17.59■□□□□ 0.41
CDT1-201ENST00000301019 NUCB2P80303 420 aa17.58■□□□□ 0.41
CDT1-201ENST00000301019 TRIM6-TRIM34B2RNG4 842 aa17.58■□□□□ 0.4
CDT1-201ENST00000301019 TRIM34Q9BYJ4 488 aa17.58■□□□□ 0.4
CDT1-201ENST00000301019 ATAD2Q6PL18 1390 aa17.57■□□□□ 0.4
CDT1-201ENST00000301019 DIP2CQ9Y2E4 1556 aa17.57■□□□□ 0.4
CDT1-201ENST00000301019 CHAF1AQ13111 956 aaPredicted RBP17.57■□□□□ 0.4
CDT1-201ENST00000301019 DDX19BQ9UMR2 479 aa17.57■□□□□ 0.4
CDT1-201ENST00000301019 COL17A1Q9UMD9 1497 aaPredicted RBP17.57■□□□□ 0.4
CDT1-201ENST00000301019 PRDM15P57071 1507 aaPredicted RBP17.56■□□□□ 0.4
CDT1-201ENST00000301019 PRAG1Q86YV5 1406 aa17.56■□□□□ 0.4
CDT1-201ENST00000301019 MTHFSP49914 203 aa17.56■□□□□ 0.4
CDT1-201ENST00000301019 HMGN5P82970 282 aaKnown RBP17.56■□□□□ 0.4
CDT1-201ENST00000301019 NUCB1Q02818 461 aa17.56■□□□□ 0.4
CDT1-201ENST00000301019 ATF7IPQ6VMQ6 1270 aa17.56■□□□□ 0.4
CDT1-201ENST00000301019 OTUD7AQ8TE49 926 aaPredicted RBP17.56■□□□□ 0.4
CDT1-201ENST00000301019 MROH1Q8NDA8 1641 aa17.56■□□□□ 0.4
CDT1-201ENST00000301019 VIRMAQ69YN4 1812 aaKnown RBP17.56■□□□□ 0.4
CDT1-201ENST00000301019 PIBF1Q8WXW3 757 aa17.56■□□□□ 0.4
CDT1-201ENST00000301019 PLA2R1Q13018 1463 aa17.56■□□□□ 0.4
CDT1-201ENST00000301019 VWDEQ8N2E2 1590 aa17.55■□□□□ 0.4
CDT1-201ENST00000301019 TAF7LQ5H9L4 462 aa17.55■□□□□ 0.4
CDT1-201ENST00000301019 GGT6Q6P531 493 aa17.55■□□□□ 0.4
CDT1-201ENST00000301019 RUNDC1Q96C34 613 aa17.55■□□□□ 0.4
CDT1-201ENST00000301019 MCM5P33992 734 aa17.54■□□□□ 0.4
CDT1-201ENST00000301019 CCDC27Q2M243 656 aa17.53■□□□□ 0.4
CDT1-201ENST00000301019 PRIMPOLQ96LW4 560 aa17.53■□□□□ 0.4
CDT1-201ENST00000301019 NEK4P51957 841 aa17.53■□□□□ 0.4
CDT1-201ENST00000301019 SRPK2P78362 688 aaKnown RBP17.52■□□□□ 0.4
CDT1-201ENST00000301019 TSHZ3Q63HK5 1081 aa17.52■□□□□ 0.4
CDT1-201ENST00000301019 RNF17Q9BXT8 1623 aaKnown RBP17.52■□□□□ 0.39
CDT1-201ENST00000301019 HDAC1Q13547 482 aaPredicted RBP17.51■□□□□ 0.39
CDT1-201ENST00000301019 NCBP3Q53F19 620 aaKnown RBP17.51■□□□□ 0.39
CDT1-201ENST00000301019 ATP10AO60312 1499 aa17.51■□□□□ 0.39
CDT1-201ENST00000301019 TRHP20396 242 aaPredicted RBP17.51■□□□□ 0.39
CDT1-201ENST00000301019 BMP2KLQ5H9B9 411 aa17.51■□□□□ 0.39
CDT1-201ENST00000301019 RTF1Q92541 710 aaKnown RBP17.51■□□□□ 0.39
CDT1-201ENST00000301019 E9PCH4 1651 aa17.5■□□□□ 0.39
CDT1-201ENST00000301019 TET3O43151 1660 aa17.5■□□□□ 0.39
CDT1-201ENST00000301019 GSPT1P15170 499 aaKnown RBP17.5■□□□□ 0.39
CDT1-201ENST00000301019 GIMAP6Q6P9H5 292 aa17.5■□□□□ 0.39
CDT1-201ENST00000301019 DRC7Q8IY82 874 aa17.5■□□□□ 0.39
CDT1-201ENST00000301019 SLC12A5Q9H2X9 1139 aa17.5■□□□□ 0.39
CDT1-201ENST00000301019 ZBTB40Q9NUA8 1239 aa17.5■□□□□ 0.39
CDT1-201ENST00000301019 IFT57Q9NWB7 429 aa17.5■□□□□ 0.39
CDT1-201ENST00000301019 LRMPQ12912 555 aa17.49■□□□□ 0.39
CDT1-201ENST00000301019 UPF3BQ9BZI7 483 aaKnown RBP17.49■□□□□ 0.39
CDT1-201ENST00000301019 THUMPD2Q9BTF0 503 aaKnown RBP17.49■□□□□ 0.39
CDT1-201ENST00000301019 CDC45O75419 566 aa17.49■□□□□ 0.39
CDT1-201ENST00000301019 SYTL4Q96C24 671 aaPredicted RBP17.48■□□□□ 0.39
CDT1-201ENST00000301019 GPRASP1Q5JY77 1395 aa17.48■□□□□ 0.39
CDT1-201ENST00000301019 IBTKQ9P2D0 1353 aaPredicted RBP17.48■□□□□ 0.39
CDT1-201ENST00000301019 SAFB2Q14151 953 aaKnown RBP eCLIP17.47■□□□□ 0.39
CDT1-201ENST00000301019 FIBPO43427 364 aa17.47■□□□□ 0.39
CDT1-201ENST00000301019 ST18O60284 1047 aa17.47■□□□□ 0.39
CDT1-201ENST00000301019 NCBP1Q09161 790 aaKnown RBP17.47■□□□□ 0.39
CDT1-201ENST00000301019 FKBP5Q13451 457 aaPredicted RBP17.47■□□□□ 0.39
CDT1-201ENST00000301019 MLECQ14165 292 aa17.47■□□□□ 0.39
CDT1-201ENST00000301019 RABEP1Q15276 862 aa17.47■□□□□ 0.39
CDT1-201ENST00000301019 LMTK2Q8IWU2 1503 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms