RNA–Protein interactions for RNA: ENST00000300146.9

PATL1-201, Transcript of PAT1 homolog 1, processing body mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PATL1, Length 4,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PATL1-201ENST00000300146 USP6P35125 1406 aa7.73□□□□□ -1.17
PATL1-201ENST00000300146 MARCH10Q8NA82 808 aaPredicted RBP7.73□□□□□ -1.17
PATL1-201ENST00000300146 CARD14Q9BXL6 1004 aa7.73□□□□□ -1.17
PATL1-201ENST00000300146 PDGFDQ9GZP0 370 aaPredicted RBP7.73□□□□□ -1.17
PATL1-201ENST00000300146 U2SURPO15042 1029 aaKnown RBP7.72□□□□□ -1.17
PATL1-201ENST00000300146 PRIM1P49642 420 aaKnown RBP7.72□□□□□ -1.17
PATL1-201ENST00000300146 IL2RBP14784 551 aa7.72□□□□□ -1.17
PATL1-201ENST00000300146 ATRNO75882 1429 aa7.71□□□□□ -1.17
PATL1-201ENST00000300146 NBPF6Q5VWK0 638 aa7.71□□□□□ -1.17
PATL1-201ENST00000300146 NBPF4Q96M43 638 aa7.71□□□□□ -1.17
PATL1-201ENST00000300146 NBPF14Q5TI25 921 aa7.71□□□□□ -1.18
PATL1-201ENST00000300146 HMOX1P09601 288 aa7.71□□□□□ -1.18
PATL1-201ENST00000300146 ZNF330Q9Y3S2 320 aaPredicted RBP7.71□□□□□ -1.18
PATL1-201ENST00000300146 WDR17Q8IZU2 1322 aa7.7□□□□□ -1.18
PATL1-201ENST00000300146 TTC21AQ8NDW8 1320 aa7.7□□□□□ -1.18
PATL1-201ENST00000300146 HOXC9P31274 260 aa7.7□□□□□ -1.18
PATL1-201ENST00000300146 POLR3AO14802 1390 aaPredicted RBP7.7□□□□□ -1.18
PATL1-201ENST00000300146 SSH2Q76I76 1423 aa7.7□□□□□ -1.18
PATL1-201ENST00000300146 SLIT2O94813 1529 aa7.69□□□□□ -1.18
PATL1-201ENST00000300146 PHF14O94880 888 aa7.69□□□□□ -1.18
PATL1-201ENST00000300146 TATP17735 454 aaPredicted RBP7.69□□□□□ -1.18
PATL1-201ENST00000300146 MSL1Q68DK7 614 aa7.69□□□□□ -1.18
PATL1-201ENST00000300146 IP6K1Q92551 441 aa7.69□□□□□ -1.18
PATL1-201ENST00000300146 CARD10Q9BWT7 1032 aa7.69□□□□□ -1.18
PATL1-201ENST00000300146 NSD3Q9BZ95 1437 aa7.69□□□□□ -1.18
PATL1-201ENST00000300146 ZCRB1Q8TBF4 217 aaKnown RBP7.68□□□□□ -1.18
PATL1-201ENST00000300146 RBM42Q9BTD8 480 aaKnown RBP7.68□□□□□ -1.18
PATL1-201ENST00000300146 ERBB3P21860 1342 aa7.68□□□□□ -1.18
PATL1-201ENST00000300146 CGNL1Q0VF96 1302 aa7.68□□□□□ -1.18
PATL1-201ENST00000300146 DDX10Q13206 875 aaKnown RBP7.68□□□□□ -1.18
PATL1-201ENST00000300146 TFCP2L1Q9NZI6 479 aa7.68□□□□□ -1.18
PATL1-201ENST00000300146 DLC1Q96QB1 1528 aa7.68□□□□□ -1.18
PATL1-201ENST00000300146 SBNO2Q9Y2G9 1366 aa7.68□□□□□ -1.18
PATL1-201ENST00000300146 CAMTA1Q9Y6Y1 1673 aa7.68□□□□□ -1.18
PATL1-201ENST00000300146 PTCD1O75127 700 aaKnown RBP7.68□□□□□ -1.18
PATL1-201ENST00000300146 CCDC125Q86Z20 511 aa7.67□□□□□ -1.18
PATL1-201ENST00000300146 NHSL1Q5SYE7 1610 aa7.67□□□□□ -1.18
PATL1-201ENST00000300146 FMN2Q9NZ56 1722 aa7.67□□□□□ -1.18
PATL1-201ENST00000300146 TXNRD1Q16881 649 aa7.67□□□□□ -1.18
PATL1-201ENST00000300146 USP19O94966 1318 aa7.67□□□□□ -1.18
PATL1-201ENST00000300146 AEBP1Q8IUX7 1158 aa7.67□□□□□ -1.18
PATL1-201ENST00000300146 LAMC1P11047 1609 aa7.66□□□□□ -1.18
PATL1-201ENST00000300146 ANO8Q9HCE9 1232 aaPredicted RBP7.66□□□□□ -1.18
PATL1-201ENST00000300146 ONECUT3O60422 494 aaPredicted RBP7.66□□□□□ -1.18
PATL1-201ENST00000300146 BLMP54132 1417 aaPredicted RBP7.66□□□□□ -1.18
PATL1-201ENST00000300146 SULT6B1Q6IMI4 303 aa7.66□□□□□ -1.18
PATL1-201ENST00000300146 STK32BQ9NY57 414 aa7.66□□□□□ -1.18
PATL1-201ENST00000300146 BARGINQ6ZT62 677 aa7.66□□□□□ -1.18
PATL1-201ENST00000300146 USP32Q8NFA0 1604 aa7.65□□□□□ -1.18
PATL1-201ENST00000300146 CRB1P82279 1406 aa7.65□□□□□ -1.18
PATL1-201ENST00000300146 AATKQ6ZMQ8 1374 aa7.65□□□□□ -1.18
PATL1-201ENST00000300146 MTHFSP49914 203 aa7.65□□□□□ -1.18
PATL1-201ENST00000300146 EYA1Q99502 592 aa7.65□□□□□ -1.18
PATL1-201ENST00000300146 SHPRHQ149N8 1683 aa7.65□□□□□ -1.19
PATL1-201ENST00000300146 POLKQ9UBT6 870 aa7.65□□□□□ -1.19
PATL1-201ENST00000300146 KIF7Q2M1P5 1343 aa7.64□□□□□ -1.19
PATL1-201ENST00000300146 NEUROD2Q15784 382 aa7.64□□□□□ -1.19
PATL1-201ENST00000300146 CAMKK2Q96RR4 588 aa7.64□□□□□ -1.19
PATL1-201ENST00000300146 THRAP3Q9Y2W1 955 aaKnown RBP7.64□□□□□ -1.19
PATL1-201ENST00000300146 ARHGEF28Q8N1W1 1705 aaKnown RBP7.64□□□□□ -1.19
PATL1-201ENST00000300146 ZNF530Q6P9A1 599 aaPredicted RBP7.64□□□□□ -1.19
PATL1-201ENST00000300146 CCNL1Q9UK58 526 aaPredicted RBP7.64□□□□□ -1.19
PATL1-201ENST00000300146 ZNF428Q96B54 188 aa7.63□□□□□ -1.19
PATL1-201ENST00000300146 CPSF1Q10570 1443 aaKnown RBP7.63□□□□□ -1.19
PATL1-201ENST00000300146 COL5A2P05997 1499 aaPredicted RBP7.63□□□□□ -1.19
PATL1-201ENST00000300146 TIMELESSQ9UNS1 1208 aa7.63□□□□□ -1.19
PATL1-201ENST00000300146 ANKRD36BQ8N2N9 1353 aa7.63□□□□□ -1.19
PATL1-201ENST00000300146 GLI3P10071 1580 aa7.63□□□□□ -1.19
PATL1-201ENST00000300146 EDC4Q6P2E9 1401 aaKnown RBP7.63□□□□□ -1.19
PATL1-201ENST00000300146 DCAF8L1A6NGE4 600 aa7.63□□□□□ -1.19
PATL1-201ENST00000300146 EIF4A2Q14240 407 aaKnown RBP7.63□□□□□ -1.19
PATL1-201ENST00000300146 PROM2Q8N271 834 aa7.63□□□□□ -1.19
PATL1-201ENST00000300146 SPON1Q9HCB6 807 aa7.62□□□□□ -1.19
PATL1-201ENST00000300146 QRICH2Q9H0J4 1663 aa7.62□□□□□ -1.19
PATL1-201ENST00000300146 SALL2Q9Y467 1007 aaPredicted RBP7.62□□□□□ -1.19
PATL1-201ENST00000300146 CDCA7Q9BWT1 371 aaPredicted RBP7.62□□□□□ -1.19
PATL1-201ENST00000300146 CPDO75976 1380 aa7.62□□□□□ -1.19
PATL1-201ENST00000300146 U2AF1L5P0DN76 240 aaPredicted RBP7.62□□□□□ -1.19
PATL1-201ENST00000300146 U2AF1Q01081 240 aaKnown RBP eCLIP7.62□□□□□ -1.192e-9■□□□□ 10
PATL1-201ENST00000300146 C1orf141Q5JVX7 400 aa7.62□□□□□ -1.19
PATL1-201ENST00000300146 SLC39A6Q13433 755 aa7.61□□□□□ -1.19
PATL1-201ENST00000300146 LRRC4BQ9NT99 713 aa7.61□□□□□ -1.19
PATL1-201ENST00000300146 TMOD3Q9NYL9 352 aa7.61□□□□□ -1.19
PATL1-201ENST00000300146 ASAP1Q9ULH1 1129 aa7.61□□□□□ -1.19
PATL1-201ENST00000300146 CYP27B1O15528 508 aa7.61□□□□□ -1.19
PATL1-201ENST00000300146 CLSPNQ9HAW4 1339 aa7.61□□□□□ -1.19
PATL1-201ENST00000300146 KIF1AQ12756 1690 aa7.61□□□□□ -1.19
PATL1-201ENST00000300146 SMG6Q86US8 1419 aaKnown RBP7.61□□□□□ -1.19
PATL1-201ENST00000300146 NGEFQ8N5V2 710 aa7.61□□□□□ -1.19
PATL1-201ENST00000300146 SPG7Q9UQ90 795 aa7.61□□□□□ -1.19
PATL1-201ENST00000300146 CABP4P57796 275 aa7.6□□□□□ -1.19
PATL1-201ENST00000300146 GPR162Q16538 588 aa7.6□□□□□ -1.19
PATL1-201ENST00000300146 TRPM1Q7Z4N2 1603 aa7.6□□□□□ -1.19
PATL1-201ENST00000300146 OVOS2A0A0G2JMS6 1433 aa7.6□□□□□ -1.19
PATL1-201ENST00000300146 OVOS2A0A0J9YW53 1432 aa7.6□□□□□ -1.19
PATL1-201ENST00000300146 OVOS2Q6IE36 1432 aa7.6□□□□□ -1.19
PATL1-201ENST00000300146 ATP6V1AP38606 617 aa7.6□□□□□ -1.19
PATL1-201ENST00000300146 SLC15A2Q16348 729 aa7.6□□□□□ -1.19
PATL1-201ENST00000300146 NPHP1O15259 732 aa7.59□□□□□ -1.19
PATL1-201ENST00000300146 AK7Q96M32 723 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms