RNA–Protein interactions for RNA: ENST00000299714.7

SEC11C-201, Transcript of SEC11 homolog C, signal peptidase complex subunit, humanhuman

TSL 5

Gene SEC11C, Length 727 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC11C-201ENST00000299714 DEFB132Q7Z7B7 95 aa18.54■□□□□ 0.56
SEC11C-201ENST00000299714 MYCNP04198 464 aaPredicted RBP18.53■□□□□ 0.56
SEC11C-201ENST00000299714 TCP11L2Q8N4U5 519 aa18.53■□□□□ 0.56
SEC11C-201ENST00000299714 KCNH5Q8NCM2 988 aa18.53■□□□□ 0.56
SEC11C-201ENST00000299714 LTN1O94822 1766 aa18.53■□□□□ 0.56
SEC11C-201ENST00000299714 LRRC37A3O60309 1634 aa18.52■□□□□ 0.56
SEC11C-201ENST00000299714 BAG6P46379 1132 aa18.52■□□□□ 0.56
SEC11C-201ENST00000299714 FAM182BQ5T319 152 aa18.52■□□□□ 0.56
SEC11C-201ENST00000299714 THRAP3Q9Y2W1 955 aaKnown RBP18.52■□□□□ 0.56
SEC11C-201ENST00000299714 TMC1Q8TDI8 760 aa18.51■□□□□ 0.55
SEC11C-201ENST00000299714 EDC4Q6P2E9 1401 aaKnown RBP18.5■□□□□ 0.55
SEC11C-201ENST00000299714 HDGFL2Q7Z4V5 671 aaPredicted RBP18.5■□□□□ 0.55
SEC11C-201ENST00000299714 PUS7Q96PZ0 661 aaKnown RBP18.5■□□□□ 0.55
SEC11C-201ENST00000299714 NINLQ9Y2I6 1382 aa18.5■□□□□ 0.55
SEC11C-201ENST00000299714 DISP2A7MBM2 1401 aa18.49■□□□□ 0.55
SEC11C-201ENST00000299714 USP31Q70CQ4 1352 aa18.49■□□□□ 0.55
SEC11C-201ENST00000299714 A0A1W2PP64 1363 aa18.48■□□□□ 0.55
SEC11C-201ENST00000299714 SOX12O15370 315 aa18.48■□□□□ 0.55
SEC11C-201ENST00000299714 PDE3BQ13370 1112 aa18.48■□□□□ 0.55
SEC11C-201ENST00000299714 FAM196AQ6ZSG2 479 aa18.48■□□□□ 0.55
SEC11C-201ENST00000299714 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.48■□□□□ 0.55
SEC11C-201ENST00000299714 TERF2IPQ9NYB0 399 aa18.48■□□□□ 0.55
SEC11C-201ENST00000299714 U3KPZ7 1027 aaPredicted RBP18.48■□□□□ 0.55
SEC11C-201ENST00000299714 ST20-MTHFSA0A0A6YYL1 179 aa18.47■□□□□ 0.55
SEC11C-201ENST00000299714 SLC24A1O60721 1099 aa18.47■□□□□ 0.55
SEC11C-201ENST00000299714 ARHGEF25Q86VW2 580 aa18.47■□□□□ 0.55
SEC11C-201ENST00000299714 TESK2Q96S53 571 aa18.47■□□□□ 0.55
SEC11C-201ENST00000299714 SLC12A5Q9H2X9 1139 aa18.47■□□□□ 0.55
SEC11C-201ENST00000299714 WDR17Q8IZU2 1322 aa18.47■□□□□ 0.55
SEC11C-201ENST00000299714 USP47Q96K76 1375 aa18.46■□□□□ 0.55
SEC11C-201ENST00000299714 TOM1L2Q6ZVM7 507 aa18.46■□□□□ 0.55
SEC11C-201ENST00000299714 PEAK1Q9H792 1746 aa18.46■□□□□ 0.55
SEC11C-201ENST00000299714 RREB1Q92766 1687 aa18.44■□□□□ 0.54
SEC11C-201ENST00000299714 OVOS2A0A0J9YW53 1432 aa18.44■□□□□ 0.54
SEC11C-201ENST00000299714 OVOS2Q6IE36 1432 aa18.44■□□□□ 0.54
SEC11C-201ENST00000299714 NME9Q86XW9 330 aa18.44■□□□□ 0.54
SEC11C-201ENST00000299714 AXIN2Q9Y2T1 843 aa18.44■□□□□ 0.54
SEC11C-201ENST00000299714 CLSPNQ9HAW4 1339 aa18.44■□□□□ 0.54
SEC11C-201ENST00000299714 OVOS2A0A0G2JMS6 1433 aa18.43■□□□□ 0.54
SEC11C-201ENST00000299714 SBF2Q86WG5 1849 aa18.43■□□□□ 0.54
SEC11C-201ENST00000299714 TRIM37O94972 964 aa18.42■□□□□ 0.54
SEC11C-201ENST00000299714 CSB-PGBD3P0DP91 1061 aa18.42■□□□□ 0.54
SEC11C-201ENST00000299714 EN1Q05925 392 aaPredicted RBP18.42■□□□□ 0.54
SEC11C-201ENST00000299714 LRP5O75197 1615 aa18.41■□□□□ 0.54
SEC11C-201ENST00000299714 FAM208AQ9UK61 1670 aaKnown RBP18.41■□□□□ 0.54
SEC11C-201ENST00000299714 RGPD3A6NKT7 1758 aaPredicted RBP18.41■□□□□ 0.54
SEC11C-201ENST00000299714 RGPD4Q7Z3J3 1758 aa18.41■□□□□ 0.54
SEC11C-201ENST00000299714 PARD3Q8TEW0 1356 aa18.41■□□□□ 0.54
SEC11C-201ENST00000299714 NUP188Q5SRE5 1749 aa18.4■□□□□ 0.54
SEC11C-201ENST00000299714 C11orf95C9JLR9 678 aaPredicted RBP18.4■□□□□ 0.54
SEC11C-201ENST00000299714 TIMELESSQ9UNS1 1208 aa18.4■□□□□ 0.54
SEC11C-201ENST00000299714 MYOM1P52179 1685 aa18.39■□□□□ 0.53
SEC11C-201ENST00000299714 TMF1P82094 1093 aa18.39■□□□□ 0.53
SEC11C-201ENST00000299714 DDB1Q16531 1140 aa18.39■□□□□ 0.53
SEC11C-201ENST00000299714 CDCA7Q9BWT1 371 aaPredicted RBP18.39■□□□□ 0.53
SEC11C-201ENST00000299714 PCGF6Q9BYE7 350 aa18.39■□□□□ 0.53
SEC11C-201ENST00000299714 KIF20BQ96Q89 1820 aa18.39■□□□□ 0.53
SEC11C-201ENST00000299714 ANKRD36BQ8N2N9 1353 aa18.39■□□□□ 0.53
SEC11C-201ENST00000299714 CCDC7Q96M83 1385 aa18.39■□□□□ 0.53
SEC11C-201ENST00000299714 CARD10Q9BWT7 1032 aa18.38■□□□□ 0.53
SEC11C-201ENST00000299714 SRCAPQ6ZRS2 3230 aa18.37■□□□□ 0.53
SEC11C-201ENST00000299714 APBA3O96018 575 aa18.37■□□□□ 0.53
SEC11C-201ENST00000299714 ERBB3P21860 1342 aa18.37■□□□□ 0.53
SEC11C-201ENST00000299714 EZH2Q15910 746 aaKnown RBP18.36■□□□□ 0.53
SEC11C-201ENST00000299714 TNS2Q63HR2 1409 aa18.36■□□□□ 0.53
SEC11C-201ENST00000299714 RNF39Q9H2S5 420 aa18.36■□□□□ 0.53
SEC11C-201ENST00000299714 CDCA8Q53HL2 280 aa18.35■□□□□ 0.53
SEC11C-201ENST00000299714 CAMKK2Q96RR4 588 aa18.35■□□□□ 0.53
SEC11C-201ENST00000299714 PSDA5PKW4 1024 aaPredicted RBP18.34■□□□□ 0.53
SEC11C-201ENST00000299714 COG3Q96JB2 828 aa18.33■□□□□ 0.52
SEC11C-201ENST00000299714 BCL9O00512 1426 aa18.32■□□□□ 0.52
SEC11C-201ENST00000299714 ANKRD24Q8TF21 1146 aa18.31■□□□□ 0.52
SEC11C-201ENST00000299714 NLRP2Q9NX02 1062 aa18.31■□□□□ 0.52
SEC11C-201ENST00000299714 NHSQ6T4R5 1651 aa18.31■□□□□ 0.52
SEC11C-201ENST00000299714 R3HDM1Q15032 1099 aaKnown RBP18.3■□□□□ 0.52
SEC11C-201ENST00000299714 MARCH10Q8NA82 808 aaPredicted RBP18.29■□□□□ 0.52
SEC11C-201ENST00000299714 RTL1A6NKG5 1358 aa18.29■□□□□ 0.52
SEC11C-201ENST00000299714 RGPD2P0DJD1 1756 aa18.28■□□□□ 0.52
SEC11C-201ENST00000299714 EXOC5O00471 708 aa18.28■□□□□ 0.52
SEC11C-201ENST00000299714 IP6K1Q92551 441 aa18.28■□□□□ 0.52
SEC11C-201ENST00000299714 MAP3K19Q56UN5 1328 aa18.27■□□□□ 0.52
SEC11C-201ENST00000299714 IL2RBP14784 551 aa18.27■□□□□ 0.52
SEC11C-201ENST00000299714 SAMD1Q6SPF0 538 aaPredicted RBP18.27■□□□□ 0.52
SEC11C-201ENST00000299714 CCER1Q8TC90 406 aaPredicted RBP18.26■□□□□ 0.51
SEC11C-201ENST00000299714 BCL11BQ9C0K0 894 aaPredicted RBP18.26■□□□□ 0.51
SEC11C-201ENST00000299714 AMPHP49418 695 aa18.25■□□□□ 0.51
SEC11C-201ENST00000299714 NBPF14Q5TI25 921 aa18.25■□□□□ 0.51
SEC11C-201ENST00000299714 NSD3Q9BZ95 1437 aa18.24■□□□□ 0.51
SEC11C-201ENST00000299714 FYB1O15117 783 aa18.24■□□□□ 0.51
SEC11C-201ENST00000299714 HOXC9P31274 260 aa18.24■□□□□ 0.51
SEC11C-201ENST00000299714 GGNBP2Q9H3C7 697 aa18.24■□□□□ 0.51
SEC11C-201ENST00000299714 PLSCR1O15162 318 aa18.23■□□□□ 0.51
SEC11C-201ENST00000299714 LTV1Q96GA3 475 aaPredicted RBP18.23■□□□□ 0.51
SEC11C-201ENST00000299714 BTAF1O14981 1849 aa18.23■□□□□ 0.51
SEC11C-201ENST00000299714 SHANK3Q9BYB0 1731 aa18.23■□□□□ 0.51
SEC11C-201ENST00000299714 ANKRD26Q9UPS8 1709 aa18.23■□□□□ 0.51
SEC11C-201ENST00000299714 SMG6Q86US8 1419 aaKnown RBP18.23■□□□□ 0.51
SEC11C-201ENST00000299714 PTF1AQ7RTS3 328 aa18.21■□□□□ 0.51
SEC11C-201ENST00000299714 DOT1LQ8TEK3 1739 aa18.2■□□□□ 0.5
SEC11C-201ENST00000299714 RRS1Q15050 365 aaKnown RBP18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms