RNA–Protein interactions for RNA: ENST00000296794.10

ARHGEF28-201, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

TSL 5 BASIC

Gene ARHGEF28, Length 5,246 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-201ENST00000296794 BCL11BQ9C0K0 894 aaPredicted RBP19.21■□□□□ 0.67
ARHGEF28-201ENST00000296794 ERICH2A1L162 156 aa19.21■□□□□ 0.67
ARHGEF28-201ENST00000296794 NAT10Q9H0A0 1025 aaKnown RBP19.21■□□□□ 0.67
ARHGEF28-201ENST00000296794 ZNF428Q96B54 188 aa19.2■□□□□ 0.66
ARHGEF28-201ENST00000296794 MAPKBP1O60336 1514 aa19.2■□□□□ 0.66
ARHGEF28-201ENST00000296794 MAGI1Q96QZ7 1491 aaPredicted RBP19.2■□□□□ 0.66
ARHGEF28-201ENST00000296794 FCHSD2O94868 740 aa19.2■□□□□ 0.66
ARHGEF28-201ENST00000296794 WASHC4Q2M389 1173 aa19.2■□□□□ 0.66
ARHGEF28-201ENST00000296794 ANKRD20A12PQ8NF67 263 aa19.2■□□□□ 0.66
ARHGEF28-201ENST00000296794 DUSP27Q5VZP5 1158 aa19.2■□□□□ 0.66
ARHGEF28-201ENST00000296794 MNS1Q8NEH6 495 aa19.19■□□□□ 0.66
ARHGEF28-201ENST00000296794 RBM10P98175 930 aaKnown RBP19.19■□□□□ 0.66
ARHGEF28-201ENST00000296794 WDR33Q9C0J8 1336 aaKnown RBP19.19■□□□□ 0.66
ARHGEF28-201ENST00000296794 IPO7O95373 1038 aaKnown RBP19.19■□□□□ 0.66
ARHGEF28-201ENST00000296794 TEX35Q5T0J7 233 aa19.19■□□□□ 0.66
ARHGEF28-201ENST00000296794 HDGFL1Q5TGJ6 251 aa19.19■□□□□ 0.66
ARHGEF28-201ENST00000296794 IQGAP2Q13576 1575 aa19.19■□□□□ 0.66
ARHGEF28-201ENST00000296794 ARHGEF11O15085 1522 aa19.19■□□□□ 0.66
ARHGEF28-201ENST00000296794 LRPPRCP42704 1394 aaKnown RBP19.18■□□□□ 0.66
ARHGEF28-201ENST00000296794 CCDC141Q6ZP82 1450 aa19.18■□□□□ 0.66
ARHGEF28-201ENST00000296794 CCDC70Q6NSX1 233 aa19.18■□□□□ 0.66
ARHGEF28-201ENST00000296794 HIP1O00291 1037 aa19.18■□□□□ 0.66
ARHGEF28-201ENST00000296794 HMGN5P82970 282 aaKnown RBP19.18■□□□□ 0.66
ARHGEF28-201ENST00000296794 SAFBQ15424 915 aaKnown RBP eCLIP19.18■□□□□ 0.66
ARHGEF28-201ENST00000296794 SSH1Q8WYL5 1049 aa19.17■□□□□ 0.66
ARHGEF28-201ENST00000296794 ARGLU1Q9NWB6 273 aaPredicted RBP19.17■□□□□ 0.66
ARHGEF28-201ENST00000296794 PDE4CQ08493 712 aa19.17■□□□□ 0.66
ARHGEF28-201ENST00000296794 NUDT16Q96DE0 195 aaKnown RBP19.17■□□□□ 0.66
ARHGEF28-201ENST00000296794 PCMTD1Q96MG8 357 aaPredicted RBP19.17■□□□□ 0.66
ARHGEF28-201ENST00000296794 XPCQ01831 940 aaPredicted RBP19.17■□□□□ 0.66
ARHGEF28-201ENST00000296794 GRIN2AQ12879 1464 aa19.16■□□□□ 0.66
ARHGEF28-201ENST00000296794 KINO60870 393 aaKnown RBP19.16■□□□□ 0.66
ARHGEF28-201ENST00000296794 NFE2L2Q16236 605 aa19.16■□□□□ 0.66
ARHGEF28-201ENST00000296794 MPNDQ8N594 471 aa19.16■□□□□ 0.66
ARHGEF28-201ENST00000296794 ZC3H6P61129 1189 aaKnown RBP19.16■□□□□ 0.66
ARHGEF28-201ENST00000296794 ERC1Q8IUD2 1116 aa19.16■□□□□ 0.66
ARHGEF28-201ENST00000296794 DNAJC2Q99543 621 aaKnown RBP19.16■□□□□ 0.66
ARHGEF28-201ENST00000296794 CYP46A1Q9Y6A2 500 aa19.16■□□□□ 0.66
ARHGEF28-201ENST00000296794 RPAP2Q8IXW5 612 aaPredicted RBP19.16■□□□□ 0.66
ARHGEF28-201ENST00000296794 SPC24Q8NBT2 197 aa19.16■□□□□ 0.66
ARHGEF28-201ENST00000296794 KCNH5Q8NCM2 988 aa19.16■□□□□ 0.66
ARHGEF28-201ENST00000296794 ADGRL1O94910 1474 aa19.15■□□□□ 0.66
ARHGEF28-201ENST00000296794 TBC1D2Q9BYX2 928 aa19.15■□□□□ 0.66
ARHGEF28-201ENST00000296794 MAP4K4O95819 1239 aaPredicted RBP19.14■□□□□ 0.66
ARHGEF28-201ENST00000296794 TBC1D2BQ9UPU7 963 aa19.14■□□□□ 0.66
ARHGEF28-201ENST00000296794 PLB1Q6P1J6 1458 aa19.14■□□□□ 0.65
ARHGEF28-201ENST00000296794 CEP89Q96ST8 783 aa19.14■□□□□ 0.65
ARHGEF28-201ENST00000296794 SRCIN1Q9C0H9 1055 aa19.14■□□□□ 0.65
ARHGEF28-201ENST00000296794 HMGB2P26583 209 aaKnown RBP19.14■□□□□ 0.65
ARHGEF28-201ENST00000296794 RRS1Q15050 365 aaKnown RBP19.14■□□□□ 0.65
ARHGEF28-201ENST00000296794 CUL7Q14999 1698 aa19.13■□□□□ 0.65
ARHGEF28-201ENST00000296794 THUMPD2Q9BTF0 503 aaKnown RBP19.13■□□□□ 0.65
ARHGEF28-201ENST00000296794 CCDC192P0DO97 292 aa19.13■□□□□ 0.65
ARHGEF28-201ENST00000296794 OLFM4Q6UX06 510 aa19.13■□□□□ 0.65
ARHGEF28-201ENST00000296794 CCDC47Q96A33 483 aaKnown RBP19.13■□□□□ 0.65
ARHGEF28-201ENST00000296794 PPP1R1BQ9UD71 204 aaPredicted RBP19.13■□□□□ 0.65
ARHGEF28-201ENST00000296794 AEBP1Q8IUX7 1158 aa19.13■□□□□ 0.65
ARHGEF28-201ENST00000296794 CEBPZQ03701 1054 aaKnown RBP19.12■□□□□ 0.65
ARHGEF28-201ENST00000296794 PDILTQ8N807 584 aa19.11■□□□□ 0.65
ARHGEF28-201ENST00000296794 FMNL2Q96PY5 1086 aa19.11■□□□□ 0.65
ARHGEF28-201ENST00000296794 BICRAQ9NZM4 1560 aa19.11■□□□□ 0.65
ARHGEF28-201ENST00000296794 SMC2O95347 1197 aa19.1■□□□□ 0.65
ARHGEF28-201ENST00000296794 FYB1O15117 783 aa19.1■□□□□ 0.65
ARHGEF28-201ENST00000296794 PPP6R1Q9UPN7 881 aa19.1■□□□□ 0.65
ARHGEF28-201ENST00000296794 SAMD1Q6SPF0 538 aaPredicted RBP19.1■□□□□ 0.65
ARHGEF28-201ENST00000296794 KRT85P78386 507 aa19.09■□□□□ 0.65
ARHGEF28-201ENST00000296794 STK3Q13188 491 aa19.09■□□□□ 0.65
ARHGEF28-201ENST00000296794 ALDH1L2Q3SY69 923 aa19.09■□□□□ 0.65
ARHGEF28-201ENST00000296794 IL1RAPL2Q9NP60 686 aa19.09■□□□□ 0.65
ARHGEF28-201ENST00000296794 CEBPAP49715 358 aaPredicted RBP19.09■□□□□ 0.65
ARHGEF28-201ENST00000296794 DISP3Q9P2K9 1392 aa19.09■□□□□ 0.65
ARHGEF28-201ENST00000296794 CNNM1Q9NRU3 951 aa19.09■□□□□ 0.65
ARHGEF28-201ENST00000296794 DMRT2Q9Y5R5 561 aa19.09■□□□□ 0.65
ARHGEF28-201ENST00000296794 WAPLQ7Z5K2 1190 aa19.09■□□□□ 0.65
ARHGEF28-201ENST00000296794 TNMDQ9H2S6 317 aa19.09■□□□□ 0.65
ARHGEF28-201ENST00000296794 LARP1BQ659C4 914 aaKnown RBP19.08■□□□□ 0.65
ARHGEF28-201ENST00000296794 ZNF396Q96N95 335 aaPredicted RBP19.08■□□□□ 0.65
ARHGEF28-201ENST00000296794 SRGAP3O43295 1099 aa19.08■□□□□ 0.65
ARHGEF28-201ENST00000296794 KDM4AO75164 1064 aa19.08■□□□□ 0.65
ARHGEF28-201ENST00000296794 IGHDP01880 384 aa19.08■□□□□ 0.65
ARHGEF28-201ENST00000296794 ANKRD1Q15327 319 aa19.08■□□□□ 0.65
ARHGEF28-201ENST00000296794 ZSCAN30Q86W11 494 aa19.08■□□□□ 0.65
ARHGEF28-201ENST00000296794 PTPRKQ15262 1439 aa19.08■□□□□ 0.64
ARHGEF28-201ENST00000296794 ABCC11Q96J66 1382 aa19.08■□□□□ 0.64
ARHGEF28-201ENST00000296794 GNL3LQ9NVN8 582 aaKnown RBP19.08■□□□□ 0.64
ARHGEF28-201ENST00000296794 EXOC6BQ9Y2D4 811 aa19.08■□□□□ 0.64
ARHGEF28-201ENST00000296794 UQCRHLA0A096LP55 91 aa19.07■□□□□ 0.64
ARHGEF28-201ENST00000296794 UQCRHP07919 91 aa19.07■□□□□ 0.64
ARHGEF28-201ENST00000296794 SYCE3A1L190 88 aa19.07■□□□□ 0.64
ARHGEF28-201ENST00000296794 IDI1Q13907 227 aa19.07■□□□□ 0.64
ARHGEF28-201ENST00000296794 STK38Q15208 465 aa19.07■□□□□ 0.64
ARHGEF28-201ENST00000296794 AMOTL2Q9Y2J4 779 aa19.07■□□□□ 0.64
ARHGEF28-201ENST00000296794 SIL1Q9H173 461 aa19.07■□□□□ 0.64
ARHGEF28-201ENST00000296794 TRIM27P14373 513 aa19.07■□□□□ 0.64
ARHGEF28-201ENST00000296794 FBXO31Q5XUX0 539 aaPredicted RBP19.07■□□□□ 0.64
ARHGEF28-201ENST00000296794 DENND4BO75064 1496 aaPredicted RBP19.06■□□□□ 0.64
ARHGEF28-201ENST00000296794 SETQ01105 290 aaPredicted RBP19.06■□□□□ 0.64
ARHGEF28-201ENST00000296794 CCDC43Q96MW1 224 aaKnown RBP19.06■□□□□ 0.64
ARHGEF28-201ENST00000296794 CWC27Q6UX04 472 aaKnown RBP19.06■□□□□ 0.64
ARHGEF28-201ENST00000296794 PDRG1Q9NUG6 133 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms