RNA–Protein interactions for RNA: ENST00000293748.9

SYNGAP1-201, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 4,556 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-201ENST00000293748 ZC3H6P61129 1189 aaKnown RBP14.91□□□□□ -0.02
SYNGAP1-201ENST00000293748 ARHGEF28Q8N1W1 1705 aaKnown RBP14.9□□□□□ -0.02
SYNGAP1-201ENST00000293748 ATP7BP35670 1465 aa14.9□□□□□ -0.02
SYNGAP1-201ENST00000293748 RCAN3Q9UKA8 241 aa14.9□□□□□ -0.02
SYNGAP1-201ENST00000293748 SETD1AO15047 1707 aaKnown RBP14.9□□□□□ -0.02
SYNGAP1-201ENST00000293748 STRCP1A6NGW2 1772 aa14.9□□□□□ -0.02
SYNGAP1-201ENST00000293748 ROBO1Q9Y6N7 1651 aa14.9□□□□□ -0.02
SYNGAP1-201ENST00000293748 USP35Q9P2H5 1018 aa14.89□□□□□ -0.03
SYNGAP1-201ENST00000293748 EDC4Q6P2E9 1401 aaKnown RBP14.89□□□□□ -0.03
SYNGAP1-201ENST00000293748 MCCP23508 829 aa14.89□□□□□ -0.03
SYNGAP1-201ENST00000293748 NALCNQ8IZF0 1738 aa14.89□□□□□ -0.03
SYNGAP1-201ENST00000293748 STRN4Q9NRL3 753 aa14.88□□□□□ -0.03
SYNGAP1-201ENST00000293748 USP21Q9UK80 565 aa14.88□□□□□ -0.03
SYNGAP1-201ENST00000293748 POLR3AO14802 1390 aaPredicted RBP14.88□□□□□ -0.03
SYNGAP1-201ENST00000293748 PNPLA6Q8IY17 1366 aa14.88□□□□□ -0.03
SYNGAP1-201ENST00000293748 CABLES1Q8TDN4 633 aa14.88□□□□□ -0.03
SYNGAP1-201ENST00000293748 KIF7Q2M1P5 1343 aa14.88□□□□□ -0.03
SYNGAP1-201ENST00000293748 USP6P35125 1406 aa14.87□□□□□ -0.03
SYNGAP1-201ENST00000293748 KIAA2012Q0VF49 1180 aa14.87□□□□□ -0.03
SYNGAP1-201ENST00000293748 TRPC5Q9UL62 973 aaPredicted RBP14.87□□□□□ -0.03
SYNGAP1-201ENST00000293748 GGNBP2Q9H3C7 697 aa14.87□□□□□ -0.03
SYNGAP1-201ENST00000293748 PHLPP1O60346 1717 aa14.87□□□□□ -0.03
SYNGAP1-201ENST00000293748 FGD1P98174 961 aa14.87□□□□□ -0.03
SYNGAP1-201ENST00000293748 CCDC7Q96M83 1385 aa14.86□□□□□ -0.03
SYNGAP1-201ENST00000293748 FMN2Q9NZ56 1722 aa14.86□□□□□ -0.03
SYNGAP1-201ENST00000293748 GCP02774 474 aa14.86□□□□□ -0.03
SYNGAP1-201ENST00000293748 ITSN1Q15811 1721 aa14.86□□□□□ -0.03
SYNGAP1-201ENST00000293748 KCNJ4P48050 445 aa14.86□□□□□ -0.03
SYNGAP1-201ENST00000293748 NME9Q86XW9 330 aa14.86□□□□□ -0.03
SYNGAP1-201ENST00000293748 SMG6Q86US8 1419 aaKnown RBP14.85□□□□□ -0.03
SYNGAP1-201ENST00000293748 NSD3Q9BZ95 1437 aa14.85□□□□□ -0.03
SYNGAP1-201ENST00000293748 GOLGA6L3A6NEY3 463 aa14.85□□□□□ -0.03
SYNGAP1-201ENST00000293748 A0A1W2PP64 1363 aa14.85□□□□□ -0.03
SYNGAP1-201ENST00000293748 AHDC1Q5TGY3 1603 aaPredicted RBP14.85□□□□□ -0.03
SYNGAP1-201ENST00000293748 TOM1L2Q6ZVM7 507 aa14.84□□□□□ -0.03
SYNGAP1-201ENST00000293748 U2SURPO15042 1029 aaKnown RBP14.84□□□□□ -0.03
SYNGAP1-201ENST00000293748 NSD2O96028 1365 aa14.84□□□□□ -0.03
SYNGAP1-201ENST00000293748 RALBP1Q15311 655 aa14.83□□□□□ -0.03
SYNGAP1-201ENST00000293748 SPRYD3Q8NCJ5 442 aa14.83□□□□□ -0.03
SYNGAP1-201ENST00000293748 AFF2P51816 1311 aa14.83□□□□□ -0.03
SYNGAP1-201ENST00000293748 SLKQ9H2G2 1235 aaPredicted RBP14.83□□□□□ -0.04
SYNGAP1-201ENST00000293748 RWDD1Q9H446 243 aaPredicted RBP14.83□□□□□ -0.04
SYNGAP1-201ENST00000293748 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.83□□□□□ -0.04
SYNGAP1-201ENST00000293748 RXRBP28702 533 aa14.83□□□□□ -0.04
SYNGAP1-201ENST00000293748 LTV1Q96GA3 475 aaPredicted RBP14.83□□□□□ -0.04
SYNGAP1-201ENST00000293748 NLRP2Q9NX02 1062 aa14.83□□□□□ -0.04
SYNGAP1-201ENST00000293748 IPO8O15397 1037 aaKnown RBP14.82□□□□□ -0.04
SYNGAP1-201ENST00000293748 QTRT2Q9H974 415 aaKnown RBP14.82□□□□□ -0.04
SYNGAP1-201ENST00000293748 OS9Q13438 667 aaPredicted RBP14.81□□□□□ -0.04
SYNGAP1-201ENST00000293748 BTG4Q9NY30 223 aa14.81□□□□□ -0.04
SYNGAP1-201ENST00000293748 DRC7Q8IY82 874 aa14.81□□□□□ -0.04
SYNGAP1-201ENST00000293748 CHRNA2Q15822 529 aa14.81□□□□□ -0.04
SYNGAP1-201ENST00000293748 GZF1Q9H116 711 aaPredicted RBP14.81□□□□□ -0.04
SYNGAP1-201ENST00000293748 SYAP1Q96A49 352 aaPredicted RBP14.8□□□□□ -0.04
SYNGAP1-201ENST00000293748 PDE3BQ13370 1112 aa14.8□□□□□ -0.04
SYNGAP1-201ENST00000293748 UNC5CLQ8IV45 518 aa14.8□□□□□ -0.04
SYNGAP1-201ENST00000293748 SF3B2Q13435 895 aaKnown RBP14.79□□□□□ -0.04
SYNGAP1-201ENST00000293748 RSPH6AQ9H0K4 717 aa14.79□□□□□ -0.04
SYNGAP1-201ENST00000293748 RBM6P78332 1123 aaKnown RBP14.78□□□□□ -0.04
SYNGAP1-201ENST00000293748 WASHC2AQ641Q2 1341 aa14.78□□□□□ -0.04
SYNGAP1-201ENST00000293748 RAPGEF4Q8WZA2 1011 aa14.77□□□□□ -0.04
SYNGAP1-201ENST00000293748 PXDNQ92626 1479 aa14.77□□□□□ -0.05
SYNGAP1-201ENST00000293748 CDCA7Q9BWT1 371 aaPredicted RBP14.76□□□□□ -0.05
SYNGAP1-201ENST00000293748 FANCIQ9NVI1 1328 aa14.76□□□□□ -0.05
SYNGAP1-201ENST00000293748 KIAA0232Q92628 1395 aa14.76□□□□□ -0.05
SYNGAP1-201ENST00000293748 FYB1O15117 783 aa14.76□□□□□ -0.05
SYNGAP1-201ENST00000293748 CPSF1Q10570 1443 aaKnown RBP14.75□□□□□ -0.05
SYNGAP1-201ENST00000293748 XIRP1Q702N8 1843 aaKnown RBP14.74□□□□□ -0.05
SYNGAP1-201ENST00000293748 USP31Q70CQ4 1352 aa14.74□□□□□ -0.05
SYNGAP1-201ENST00000293748 HSP90AA2PQ14568 343 aaPredicted RBP14.73□□□□□ -0.05
SYNGAP1-201ENST00000293748 C11orf95C9JLR9 678 aaPredicted RBP14.73□□□□□ -0.05
SYNGAP1-201ENST00000293748 CALD1Q05682 793 aaKnown RBP14.73□□□□□ -0.05
SYNGAP1-201ENST00000293748 NAP1L2Q9ULW6 460 aaPredicted RBP14.73□□□□□ -0.05
SYNGAP1-201ENST00000293748 USP19O94966 1318 aa14.73□□□□□ -0.05
SYNGAP1-201ENST00000293748 TATP17735 454 aaPredicted RBP14.72□□□□□ -0.05
SYNGAP1-201ENST00000293748 ANKRD24Q8TF21 1146 aa14.72□□□□□ -0.05
SYNGAP1-201ENST00000293748 HTATSF1O43719 755 aaKnown RBP14.72□□□□□ -0.05
SYNGAP1-201ENST00000293748 IP6K1Q92551 441 aa14.72□□□□□ -0.05
SYNGAP1-201ENST00000293748 RRS1Q15050 365 aaKnown RBP14.72□□□□□ -0.05
SYNGAP1-201ENST00000293748 ARHGEF25Q86VW2 580 aa14.71□□□□□ -0.05
SYNGAP1-201ENST00000293748 NHSL1Q5SYE7 1610 aa14.71□□□□□ -0.05
SYNGAP1-201ENST00000293748 KIAA1211Q6ZU35 1233 aa14.71□□□□□ -0.05
SYNGAP1-201ENST00000293748 TCP11L2Q8N4U5 519 aa14.71□□□□□ -0.05
SYNGAP1-201ENST00000293748 FAM83GA6ND36 823 aa14.71□□□□□ -0.06
SYNGAP1-201ENST00000293748 GSE1Q14687 1217 aa14.71□□□□□ -0.06
SYNGAP1-201ENST00000293748 VPS72Q15906 364 aa14.71□□□□□ -0.06
SYNGAP1-201ENST00000293748 ZRANB1Q9UGI0 708 aa14.71□□□□□ -0.06
SYNGAP1-201ENST00000293748 COL16A1Q07092 1604 aaPredicted RBP14.71□□□□□ -0.06
SYNGAP1-201ENST00000293748 FLT4P35916 1363 aa14.7□□□□□ -0.06
SYNGAP1-201ENST00000293748 AATKQ6ZMQ8 1374 aa14.7□□□□□ -0.06
SYNGAP1-201ENST00000293748 GOLGA2Q08379 1002 aa14.7□□□□□ -0.06
SYNGAP1-201ENST00000293748 GJD4Q96KN9 370 aaPredicted RBP14.7□□□□□ -0.06
SYNGAP1-201ENST00000293748 EXOC5O00471 708 aa14.69□□□□□ -0.06
SYNGAP1-201ENST00000293748 DIAPH1O60610 1272 aaKnown RBP14.69□□□□□ -0.06
SYNGAP1-201ENST00000293748 THRAP3Q9Y2W1 955 aaKnown RBP14.69□□□□□ -0.06
SYNGAP1-201ENST00000293748 DDX11L8A8MPP1 907 aa14.69□□□□□ -0.06
SYNGAP1-201ENST00000293748 FNBP4Q8N3X1 1017 aaPredicted RBP14.69□□□□□ -0.06
SYNGAP1-201ENST00000293748 CPDO75976 1380 aa14.69□□□□□ -0.06
SYNGAP1-201ENST00000293748 MFAP1P55081 439 aaKnown RBP14.68□□□□□ -0.06
SYNGAP1-201ENST00000293748 CARD14Q9BXL6 1004 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms