RNA–Protein interactions for RNA: ENST00000286398.11

SMC2-201, Transcript of structural maintenance of chromosomes 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC2, Length 5,992 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC2-201ENST00000286398 STK3Q13188 491 aa10.71□□□□□ -0.69
SMC2-201ENST00000286398 ANKRD1Q15327 319 aa10.71□□□□□ -0.69
SMC2-201ENST00000286398 JAKMIP3Q5VZ66 844 aa10.71□□□□□ -0.69
SMC2-201ENST00000286398 PAF1Q8N7H5 531 aa10.71□□□□□ -0.69
SMC2-201ENST00000286398 CCDC148Q8NFR7 591 aa10.71□□□□□ -0.69
SMC2-201ENST00000286398 TANGO6Q9C0B7 1094 aa10.71□□□□□ -0.69
SMC2-201ENST00000286398 MAP3K11Q16584 847 aa10.71□□□□□ -0.69
SMC2-201ENST00000286398 CFAP100Q494V2 611 aa10.71□□□□□ -0.7
SMC2-201ENST00000286398 KIAA1328Q86T90 577 aa10.71□□□□□ -0.7
SMC2-201ENST00000286398 MNAT1P51948 309 aa10.7□□□□□ -0.7
SMC2-201ENST00000286398 TAF4BQ92750 862 aa10.7□□□□□ -0.7
SMC2-201ENST00000286398 EID1Q9Y6B2 187 aa10.7□□□□□ -0.7
SMC2-201ENST00000286398 SMTNL1A8MU46 457 aa10.7□□□□□ -0.7
SMC2-201ENST00000286398 PPP4R3BQ5MIZ7 849 aa10.7□□□□□ -0.7
SMC2-201ENST00000286398 RIC3Q7Z5B4 369 aa10.7□□□□□ -0.7
SMC2-201ENST00000286398 MICALCLQ6ZW33 695 aa10.7□□□□□ -0.7
SMC2-201ENST00000286398 TIGD1Q96MW7 591 aa10.7□□□□□ -0.7
SMC2-201ENST00000286398 WASHC2CQ9Y4E1 1318 aa10.7□□□□□ -0.7
SMC2-201ENST00000286398 BRD4O60885 1362 aaPredicted RBP10.7□□□□□ -0.7
SMC2-201ENST00000286398 HMOX1P09601 288 aa10.7□□□□□ -0.7
SMC2-201ENST00000286398 GBP2P32456 591 aaPredicted RBP10.7□□□□□ -0.7
SMC2-201ENST00000286398 MINK1Q8N4C8 1332 aaPredicted RBP10.69□□□□□ -0.7
SMC2-201ENST00000286398 CNTLNQ9NXG0 1405 aa10.69□□□□□ -0.7
SMC2-201ENST00000286398 ZSCAN12O43309 604 aa10.69□□□□□ -0.7
SMC2-201ENST00000286398 DNAJC2Q99543 621 aaKnown RBP10.69□□□□□ -0.7
SMC2-201ENST00000286398 C1orf115Q9H7X2 142 aa10.69□□□□□ -0.7
SMC2-201ENST00000286398 KIF4BQ2VIQ3 1234 aa10.69□□□□□ -0.7
SMC2-201ENST00000286398 TCP11L2Q8N4U5 519 aa10.69□□□□□ -0.7
SMC2-201ENST00000286398 SMARCC1Q92922 1105 aaPredicted RBP10.69□□□□□ -0.7
SMC2-201ENST00000286398 AIMP1Q12904 312 aaKnown RBP10.68□□□□□ -0.7
SMC2-201ENST00000286398 CCDC113Q9H0I3 377 aa10.68□□□□□ -0.7
SMC2-201ENST00000286398 SPDYE4A6NLX3 237 aa10.68□□□□□ -0.7
SMC2-201ENST00000286398 TBC1D2BQ9UPU7 963 aa10.68□□□□□ -0.7
SMC2-201ENST00000286398 MSH5O43196 834 aa10.68□□□□□ -0.7
SMC2-201ENST00000286398 PAXIP1Q6ZW49 1069 aaPredicted RBP10.68□□□□□ -0.7
SMC2-201ENST00000286398 EIF5P55010 431 aaKnown RBP10.68□□□□□ -0.7
SMC2-201ENST00000286398 DNAAF4Q8WXU2 420 aa10.68□□□□□ -0.7
SMC2-201ENST00000286398 TRIM22Q8IYM9 498 aa10.68□□□□□ -0.7
SMC2-201ENST00000286398 DYNC1I1O14576 645 aa10.67□□□□□ -0.7
SMC2-201ENST00000286398 MCM3P25205 808 aa10.67□□□□□ -0.7
SMC2-201ENST00000286398 EXOSC9Q06265 439 aaKnown RBP10.67□□□□□ -0.7
SMC2-201ENST00000286398 IMMTQ16891 758 aaKnown RBP10.67□□□□□ -0.7
SMC2-201ENST00000286398 SPATA24Q86W54 205 aa10.67□□□□□ -0.7
SMC2-201ENST00000286398 C16orf45Q96MC5 204 aaPredicted RBP10.67□□□□□ -0.7
SMC2-201ENST00000286398 PPP6R1Q9UPN7 881 aa10.67□□□□□ -0.7
SMC2-201ENST00000286398 AKNAQ7Z591 1439 aa10.67□□□□□ -0.7
SMC2-201ENST00000286398 KIF5CO60282 957 aa10.67□□□□□ -0.7
SMC2-201ENST00000286398 CCDC91Q7Z6B0 441 aa10.67□□□□□ -0.7
SMC2-201ENST00000286398 ZHX3Q9H4I2 956 aa10.67□□□□□ -0.7
SMC2-201ENST00000286398 VGFO15240 615 aaPredicted RBP10.67□□□□□ -0.7
SMC2-201ENST00000286398 LMAN1P49257 510 aa10.67□□□□□ -0.7
SMC2-201ENST00000286398 IKQ13123 557 aaPredicted RBP10.67□□□□□ -0.7
SMC2-201ENST00000286398 BLOC1S2Q6QNY1 142 aa10.67□□□□□ -0.7
SMC2-201ENST00000286398 UACAQ9BZF9 1416 aa10.66□□□□□ -0.7
SMC2-201ENST00000286398 CCDC175P0C221 793 aa10.66□□□□□ -0.7
SMC2-201ENST00000286398 BCAR3O75815 825 aa10.66□□□□□ -0.7
SMC2-201ENST00000286398 ZSCAN31Q96LW9 406 aaPredicted RBP10.66□□□□□ -0.7
SMC2-201ENST00000286398 CASQ1P31415 396 aa10.66□□□□□ -0.7
SMC2-201ENST00000286398 SMC1AQ14683 1233 aaKnown RBP10.66□□□□□ -0.7
SMC2-201ENST00000286398 BMS1Q14692 1282 aaKnown RBP10.66□□□□□ -0.7
SMC2-201ENST00000286398 RB1CC1Q8TDY2 1594 aa10.66□□□□□ -0.7
SMC2-201ENST00000286398 SEPT11Q9NVA2 429 aaKnown RBP10.65□□□□□ -0.7
SMC2-201ENST00000286398 USP25Q9UHP3 1055 aa10.65□□□□□ -0.7
SMC2-201ENST00000286398 GNAI2P04899 355 aa10.65□□□□□ -0.7
SMC2-201ENST00000286398 TDO2P48775 406 aa10.65□□□□□ -0.7
SMC2-201ENST00000286398 CAMK4Q16566 473 aa10.65□□□□□ -0.7
SMC2-201ENST00000286398 PDIA4P13667 645 aaKnown RBP10.65□□□□□ -0.7
SMC2-201ENST00000286398 TRMT1Q9NXH9 659 aaKnown RBP10.65□□□□□ -0.7
SMC2-201ENST00000286398 MCM5P33992 734 aa10.65□□□□□ -0.7
SMC2-201ENST00000286398 IFFO1Q0D2I5 559 aa10.65□□□□□ -0.7
SMC2-201ENST00000286398 TMEM132AQ24JP5 1023 aa10.64□□□□□ -0.71
SMC2-201ENST00000286398 SPECC1Q5M775 1068 aa10.64□□□□□ -0.71
SMC2-201ENST00000286398 LUZP1Q86V48 1076 aa10.64□□□□□ -0.71
SMC2-201ENST00000286398 ERC1Q8IUD2 1116 aa10.64□□□□□ -0.71
SMC2-201ENST00000286398 CARMIL2Q6F5E8 1435 aa10.64□□□□□ -0.71
SMC2-201ENST00000286398 NBPF1Q3BBV0 1214 aa10.64□□□□□ -0.71
SMC2-201ENST00000286398 CCDC183Q5T5S1 534 aa10.64□□□□□ -0.71
SMC2-201ENST00000286398 SRRTQ9BXP5 876 aaKnown RBP10.64□□□□□ -0.71
SMC2-201ENST00000286398 CHD1LQ86WJ1 897 aa10.64□□□□□ -0.71
SMC2-201ENST00000286398 CLIP2Q9UDT6 1046 aa10.64□□□□□ -0.71
SMC2-201ENST00000286398 PDRG1Q9NUG6 133 aa10.64□□□□□ -0.71
SMC2-201ENST00000286398 NOL7Q9UMY1 257 aaKnown RBP10.64□□□□□ -0.71
SMC2-201ENST00000286398 SPA17Q15506 151 aa10.64□□□□□ -0.71
SMC2-201ENST00000286398 FERMT3Q86UX7 667 aa10.64□□□□□ -0.71
SMC2-201ENST00000286398 ANO10Q9NW15 660 aa10.64□□□□□ -0.71
SMC2-201ENST00000286398 JAKMIP1Q96N16 626 aaKnown RBP10.63□□□□□ -0.71
SMC2-201ENST00000286398 RAI14Q9P0K7 980 aa10.63□□□□□ -0.71
SMC2-201ENST00000286398 WASHC2AQ641Q2 1341 aa10.63□□□□□ -0.71
SMC2-201ENST00000286398 PAFAH1B1P43034 410 aa10.63□□□□□ -0.71
SMC2-201ENST00000286398 MTHFSP49914 203 aa10.63□□□□□ -0.71
SMC2-201ENST00000286398 CCDC30Q5VVM6 783 aa10.63□□□□□ -0.71
SMC2-201ENST00000286398 PRIMPOLQ96LW4 560 aa10.63□□□□□ -0.71
SMC2-201ENST00000286398 NOB1Q9ULX3 412 aaKnown RBP10.63□□□□□ -0.71
SMC2-201ENST00000286398 TOP1P11387 765 aaKnown RBP10.63□□□□□ -0.71
SMC2-201ENST00000286398 GGNBP2Q9H3C7 697 aa10.63□□□□□ -0.71
SMC2-201ENST00000286398 KRT222Q8N1A0 295 aa10.63□□□□□ -0.71
SMC2-201ENST00000286398 ZNF397Q8NF99 534 aaPredicted RBP10.63□□□□□ -0.71
SMC2-201ENST00000286398 TWISTNBQ3B726 338 aaPredicted RBP10.62□□□□□ -0.71
SMC2-201ENST00000286398 NEMFO60524 1076 aa10.62□□□□□ -0.71
SMC2-201ENST00000286398 EVA1CP58658 441 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 160.3 ms