RNA–Protein interactions for RNA: ENST00000283415.3

LPCAT1-201, Transcript of lysophosphatidylcholine acyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPCAT1, Length 3,966 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT1-201ENST00000283415 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.35■□□□□ 0.37
LPCAT1-201ENST00000283415 ZKSCAN2Q63HK3 967 aa17.35■□□□□ 0.37
LPCAT1-201ENST00000283415 DIAPH1O60610 1272 aaKnown RBP17.35■□□□□ 0.37
LPCAT1-201ENST00000283415 AATKQ6ZMQ8 1374 aa17.34■□□□□ 0.37
LPCAT1-201ENST00000283415 HSP90AB1P08238 724 aaKnown RBP17.34■□□□□ 0.37
LPCAT1-201ENST00000283415 TMPOP42166 694 aaKnown RBP17.34■□□□□ 0.37
LPCAT1-201ENST00000283415 ANKRD45Q5TZF3 282 aa17.34■□□□□ 0.37
LPCAT1-201ENST00000283415 MARF1Q9Y4F3 1742 aaKnown RBP17.33■□□□□ 0.37
LPCAT1-201ENST00000283415 SEC24BO95487 1268 aa17.33■□□□□ 0.36
LPCAT1-201ENST00000283415 DZIP1LQ8IYY4 767 aaKnown RBP17.33■□□□□ 0.36
LPCAT1-201ENST00000283415 PEAK1Q9H792 1746 aa17.33■□□□□ 0.36
LPCAT1-201ENST00000283415 RIMS2Q9UQ26 1411 aa17.33■□□□□ 0.36
LPCAT1-201ENST00000283415 MVPQ14764 893 aaKnown RBP17.32■□□□□ 0.36
LPCAT1-201ENST00000283415 PRKAR2BP31323 418 aa17.32■□□□□ 0.36
LPCAT1-201ENST00000283415 PMFBP1Q8TBY8 1022 aa17.32■□□□□ 0.36
LPCAT1-201ENST00000283415 RRS1Q15050 365 aaKnown RBP17.31■□□□□ 0.36
LPCAT1-201ENST00000283415 TRIM44Q96DX7 344 aaPredicted RBP17.31■□□□□ 0.36
LPCAT1-201ENST00000283415 SIRT1Q96EB6 747 aa17.31■□□□□ 0.36
LPCAT1-201ENST00000283415 EDC4Q6P2E9 1401 aaKnown RBP17.31■□□□□ 0.36
LPCAT1-201ENST00000283415 PDZRN3Q9UPQ7 1066 aa17.31■□□□□ 0.36
LPCAT1-201ENST00000283415 FMN2Q9NZ56 1722 aa17.31■□□□□ 0.36
LPCAT1-201ENST00000283415 HDAC1Q13547 482 aaPredicted RBP17.31■□□□□ 0.36
LPCAT1-201ENST00000283415 PTCH1Q13635 1447 aa17.31■□□□□ 0.36
LPCAT1-201ENST00000283415 NOL8Q76FK4 1167 aaKnown RBP17.3■□□□□ 0.36
LPCAT1-201ENST00000283415 DCTN1Q14203 1278 aa17.3■□□□□ 0.36
LPCAT1-201ENST00000283415 HSCBQ8IWL3 235 aa17.29■□□□□ 0.36
LPCAT1-201ENST00000283415 ANP32BQ92688 251 aaKnown RBP17.29■□□□□ 0.36
LPCAT1-201ENST00000283415 CDK19Q9BWU1 502 aa17.29■□□□□ 0.36
LPCAT1-201ENST00000283415 RSPH6AQ9H0K4 717 aa17.29■□□□□ 0.36
LPCAT1-201ENST00000283415 N4BP2Q86UW6 1770 aaPredicted RBP17.29■□□□□ 0.36
LPCAT1-201ENST00000283415 IPO8O15397 1037 aaKnown RBP17.28■□□□□ 0.36
LPCAT1-201ENST00000283415 ANTXR1Q9H6X2 564 aa17.28■□□□□ 0.36
LPCAT1-201ENST00000283415 FOXD4L5Q5VV16 416 aaPredicted RBP17.28■□□□□ 0.36
LPCAT1-201ENST00000283415 FOXD4L4Q8WXT5 416 aaPredicted RBP17.28■□□□□ 0.36
LPCAT1-201ENST00000283415 ARID3AQ99856 593 aa17.28■□□□□ 0.36
LPCAT1-201ENST00000283415 NGDNQ8NEJ9 315 aaKnown RBP17.27■□□□□ 0.36
LPCAT1-201ENST00000283415 NOB1Q9ULX3 412 aaKnown RBP17.27■□□□□ 0.36
LPCAT1-201ENST00000283415 TUBGCP6Q96RT7 1819 aa17.27■□□□□ 0.36
LPCAT1-201ENST00000283415 A0A0G2JS52 829 aa17.27■□□□□ 0.36
LPCAT1-201ENST00000283415 RBM33Q96EV2 1170 aaKnown RBP17.27■□□□□ 0.35
LPCAT1-201ENST00000283415 SLC26A8Q96RN1 970 aa17.26■□□□□ 0.35
LPCAT1-201ENST00000283415 ZNF853P0CG23 659 aa17.26■□□□□ 0.35
LPCAT1-201ENST00000283415 LRRC37A3O60309 1634 aa17.26■□□□□ 0.35
LPCAT1-201ENST00000283415 TRIM27P14373 513 aa17.26■□□□□ 0.35
LPCAT1-201ENST00000283415 METP08581 1390 aa17.25■□□□□ 0.35
LPCAT1-201ENST00000283415 POLKQ9UBT6 870 aa17.25■□□□□ 0.35
LPCAT1-201ENST00000283415 FCHSD2O94868 740 aa17.25■□□□□ 0.35
LPCAT1-201ENST00000283415 TBC1D32Q96NH3 1257 aa17.25■□□□□ 0.35
LPCAT1-201ENST00000283415 TAOK2Q9UL54 1235 aa17.25■□□□□ 0.35
LPCAT1-201ENST00000283415 ALDH1L2Q3SY69 923 aa17.24■□□□□ 0.35
LPCAT1-201ENST00000283415 COG3Q96JB2 828 aa17.24■□□□□ 0.35
LPCAT1-201ENST00000283415 SSH2Q76I76 1423 aa17.24■□□□□ 0.35
LPCAT1-201ENST00000283415 SMC5Q8IY18 1101 aa17.24■□□□□ 0.35
LPCAT1-201ENST00000283415 NCKAP5LQ9HCH0 1330 aa17.24■□□□□ 0.35
LPCAT1-201ENST00000283415 SSH1Q8WYL5 1049 aa17.24■□□□□ 0.35
LPCAT1-201ENST00000283415 ZBTB40Q9NUA8 1239 aa17.24■□□□□ 0.35
LPCAT1-201ENST00000283415 RTF1Q92541 710 aaKnown RBP17.23■□□□□ 0.35
LPCAT1-201ENST00000283415 NCOA3Q9Y6Q9 1424 aa17.23■□□□□ 0.35
LPCAT1-201ENST00000283415 FOXD4L6Q3SYB3 417 aaPredicted RBP17.23■□□□□ 0.35
LPCAT1-201ENST00000283415 FOXD4L3Q6VB84 417 aaPredicted RBP17.23■□□□□ 0.35
LPCAT1-201ENST00000283415 ADAMTS13Q76LX8 1427 aa17.23■□□□□ 0.35
LPCAT1-201ENST00000283415 ZRANB1Q9UGI0 708 aa17.23■□□□□ 0.35
LPCAT1-201ENST00000283415 MIS18AQ9NYP9 233 aa17.22■□□□□ 0.35
LPCAT1-201ENST00000283415 EMILIN1Q9Y6C2 1016 aa17.22■□□□□ 0.35
LPCAT1-201ENST00000283415 IL13P35225 146 aa17.22■□□□□ 0.35
LPCAT1-201ENST00000283415 PNNQ9H307 717 aaKnown RBP17.22■□□□□ 0.35
LPCAT1-201ENST00000283415 AMPHP49418 695 aa17.21■□□□□ 0.35
LPCAT1-201ENST00000283415 ATF7IPQ6VMQ6 1270 aa17.21■□□□□ 0.35
LPCAT1-201ENST00000283415 OVOS2A0A0J9YW53 1432 aa17.21■□□□□ 0.35
LPCAT1-201ENST00000283415 OVOS2Q6IE36 1432 aa17.21■□□□□ 0.35
LPCAT1-201ENST00000283415 GOLGA6L3A6NEY3 463 aa17.21■□□□□ 0.34
LPCAT1-201ENST00000283415 NME9Q86XW9 330 aa17.2■□□□□ 0.34
LPCAT1-201ENST00000283415 XRN1Q8IZH2 1706 aaKnown RBP17.19■□□□□ 0.34
LPCAT1-201ENST00000283415 RGS12O14924 1447 aa17.19■□□□□ 0.34
LPCAT1-201ENST00000283415 SLIT1O75093 1534 aa17.18■□□□□ 0.34
LPCAT1-201ENST00000283415 FAM83GA6ND36 823 aa17.18■□□□□ 0.34
LPCAT1-201ENST00000283415 TMEM57Q8N5G2 664 aa17.18■□□□□ 0.34
LPCAT1-201ENST00000283415 CEBPAP49715 358 aaPredicted RBP17.17■□□□□ 0.34
LPCAT1-201ENST00000283415 ARHGAP45Q92619 1136 aa17.17■□□□□ 0.34
LPCAT1-201ENST00000283415 ARHGAP23Q9P227 1491 aa17.17■□□□□ 0.34
LPCAT1-201ENST00000283415 KIF24Q5T7B8 1368 aa17.16■□□□□ 0.34
LPCAT1-201ENST00000283415 WASLO00401 505 aaPredicted RBP17.16■□□□□ 0.34
LPCAT1-201ENST00000283415 DDIT3P35638 169 aa17.16■□□□□ 0.34
LPCAT1-201ENST00000283415 L1TD1Q5T7N2 865 aaKnown RBP17.16■□□□□ 0.34
LPCAT1-201ENST00000283415 DDX19BQ9UMR2 479 aa17.16■□□□□ 0.34
LPCAT1-201ENST00000283415 ABCC4O15439 1325 aa17.16■□□□□ 0.34
LPCAT1-201ENST00000283415 SULT6B1Q6IMI4 303 aa17.16■□□□□ 0.34
LPCAT1-201ENST00000283415 USP31Q70CQ4 1352 aa17.15■□□□□ 0.34
LPCAT1-201ENST00000283415 PIK3C2AO00443 1686 aa17.15■□□□□ 0.34
LPCAT1-201ENST00000283415 PHACTR3Q96KR7 559 aa17.15■□□□□ 0.34
LPCAT1-201ENST00000283415 RGPD8O14715 1765 aaPredicted RBP17.15■□□□□ 0.34
LPCAT1-201ENST00000283415 GOLGA6L22H0YM25 854 aa17.14■□□□□ 0.34
LPCAT1-201ENST00000283415 EIF2S2P20042 333 aaKnown RBP17.14■□□□□ 0.34
LPCAT1-201ENST00000283415 OS9Q13438 667 aaPredicted RBP17.14■□□□□ 0.34
LPCAT1-201ENST00000283415 KIF16BQ96L93 1317 aa17.14■□□□□ 0.33
LPCAT1-201ENST00000283415 VAMP4O75379 141 aa17.14■□□□□ 0.33
LPCAT1-201ENST00000283415 PLCB2Q00722 1185 aa17.14■□□□□ 0.33
LPCAT1-201ENST00000283415 C22orf23Q9BZE7 217 aa17.14■□□□□ 0.33
LPCAT1-201ENST00000283415 DIP2AQ14689 1571 aa17.13■□□□□ 0.33
LPCAT1-201ENST00000283415 NUCB1Q02818 461 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms