RNA–Protein interactions for RNA: ENST00000283254.11

SCN3A-201, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN3A, Length 9,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-201ENST00000283254 TRIM5Q9C035 493 aa4.8□□□□□ -1.64
SCN3A-201ENST00000283254 GBP2P32456 591 aaPredicted RBP4.8□□□□□ -1.64
SCN3A-201ENST00000283254 PDILTQ8N807 584 aa4.8□□□□□ -1.64
SCN3A-201ENST00000283254 SEC63Q9UGP8 760 aaKnown RBP4.8□□□□□ -1.64
SCN3A-201ENST00000283254 CABP4P57796 275 aa4.8□□□□□ -1.64
SCN3A-201ENST00000283254 GCC1Q96CN9 775 aa4.8□□□□□ -1.64
SCN3A-201ENST00000283254 DEF6Q9H4E7 631 aa4.8□□□□□ -1.64
SCN3A-201ENST00000283254 CYP46A1Q9Y6A2 500 aa4.8□□□□□ -1.64
SCN3A-201ENST00000283254 GNAI2P04899 355 aa4.8□□□□□ -1.64
SCN3A-201ENST00000283254 GSE1Q14687 1217 aa4.8□□□□□ -1.64
SCN3A-201ENST00000283254 PPP4R3BQ5MIZ7 849 aa4.8□□□□□ -1.64
SCN3A-201ENST00000283254 CCDC181Q5TID7 509 aa4.8□□□□□ -1.64
SCN3A-201ENST00000283254 TMEM87AQ8NBN3 555 aa4.8□□□□□ -1.64
SCN3A-201ENST00000283254 C22orf23Q9BZE7 217 aa4.8□□□□□ -1.64
SCN3A-201ENST00000283254 DMRT2Q9Y5R5 561 aa4.8□□□□□ -1.64
SCN3A-201ENST00000283254 NEFHP12036 1026 aa4.8□□□□□ -1.64
SCN3A-201ENST00000283254 ATP2B2Q01814 1243 aa4.8□□□□□ -1.64
SCN3A-201ENST00000283254 CCDC112Q8NEF3 446 aa4.8□□□□□ -1.64
SCN3A-201ENST00000283254 DNAJC2Q99543 621 aaKnown RBP4.8□□□□□ -1.64
SCN3A-201ENST00000283254 STRN4Q9NRL3 753 aa4.8□□□□□ -1.64
SCN3A-201ENST00000283254 CCDC69A6NI79 296 aa4.8□□□□□ -1.64
SCN3A-201ENST00000283254 JAKMIP3Q5VZ66 844 aa4.8□□□□□ -1.64
SCN3A-201ENST00000283254 IL27Q8NEV9 243 aa4.8□□□□□ -1.64
SCN3A-201ENST00000283254 SCLT1Q96NL6 688 aa4.8□□□□□ -1.64
SCN3A-201ENST00000283254 CCDC196A0A1B0GTZ2 297 aa4.79□□□□□ -1.64
SCN3A-201ENST00000283254 CCDC66A2RUB6 948 aa4.79□□□□□ -1.64
SCN3A-201ENST00000283254 STARD3NLO95772 234 aa4.79□□□□□ -1.64
SCN3A-201ENST00000283254 KCNH5Q8NCM2 988 aa4.79□□□□□ -1.64
SCN3A-201ENST00000283254 CEP126Q9P2H0 1117 aa4.79□□□□□ -1.64
SCN3A-201ENST00000283254 AXDND1Q5T1B0 1012 aaPredicted RBP4.79□□□□□ -1.64
SCN3A-201ENST00000283254 CCDC192P0DO97 292 aa4.79□□□□□ -1.64
SCN3A-201ENST00000283254 ENOX2Q16206 610 aaKnown RBP4.79□□□□□ -1.64
SCN3A-201ENST00000283254 CCDC150Q8NCX0 1101 aa4.79□□□□□ -1.64
SCN3A-201ENST00000283254 PRDM2Q13029 1718 aa4.79□□□□□ -1.64
SCN3A-201ENST00000283254 NECTIN2Q92692 538 aa4.79□□□□□ -1.64
SCN3A-201ENST00000283254 KIF2AO00139 706 aaPredicted RBP4.79□□□□□ -1.64
SCN3A-201ENST00000283254 PLIN1O60240 522 aa4.79□□□□□ -1.64
SCN3A-201ENST00000283254 EIF3JO75822 258 aaKnown RBP4.79□□□□□ -1.64
SCN3A-201ENST00000283254 ZNF76P36508 570 aa4.79□□□□□ -1.64
SCN3A-201ENST00000283254 TRAF1Q13077 416 aa4.79□□□□□ -1.64
SCN3A-201ENST00000283254 HSP90AB3PQ58FF7 597 aa4.79□□□□□ -1.64
SCN3A-201ENST00000283254 CCDC97Q96F63 343 aaPredicted RBP4.79□□□□□ -1.64
SCN3A-201ENST00000283254 FERMT1Q9BQL6 677 aa4.79□□□□□ -1.64
SCN3A-201ENST00000283254 PPP6R1Q9UPN7 881 aa4.79□□□□□ -1.64
SCN3A-201ENST00000283254 EPB41L2O43491 1005 aaKnown RBP4.79□□□□□ -1.64
SCN3A-201ENST00000283254 KIAA0754O94854 1291 aa4.79□□□□□ -1.64
SCN3A-201ENST00000283254 CETN1Q12798 172 aa4.79□□□□□ -1.64
SCN3A-201ENST00000283254 ZSCAN31Q96LW9 406 aaPredicted RBP4.79□□□□□ -1.64
SCN3A-201ENST00000283254 CEP131Q9UPN4 1083 aa4.79□□□□□ -1.64
SCN3A-201ENST00000283254 KIF21BO75037 1637 aa4.79□□□□□ -1.64
SCN3A-201ENST00000283254 FGD5Q6ZNL6 1462 aa4.79□□□□□ -1.64
SCN3A-201ENST00000283254 TSPYL1Q9H0U9 437 aa4.79□□□□□ -1.64
SCN3A-201ENST00000283254 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP4.78□□□□□ -1.64
SCN3A-201ENST00000283254 FOXD4L6Q3SYB3 417 aaPredicted RBP4.78□□□□□ -1.64
SCN3A-201ENST00000283254 FOXD4L3Q6VB84 417 aaPredicted RBP4.78□□□□□ -1.64
SCN3A-201ENST00000283254 ZNF710Q8N1W2 664 aa4.78□□□□□ -1.64
SCN3A-201ENST00000283254 FAM43AQ8N2R8 423 aa4.78□□□□□ -1.64
SCN3A-201ENST00000283254 TTC21AQ8NDW8 1320 aa4.78□□□□□ -1.64
SCN3A-201ENST00000283254 TDO2P48775 406 aa4.78□□□□□ -1.64
SCN3A-201ENST00000283254 CCDC91Q7Z6B0 441 aa4.78□□□□□ -1.64
SCN3A-201ENST00000283254 TAF4BQ92750 862 aa4.78□□□□□ -1.64
SCN3A-201ENST00000283254 EFCAB5A4FU69 1503 aa4.78□□□□□ -1.64
SCN3A-201ENST00000283254 WDR33Q9C0J8 1336 aaKnown RBP4.78□□□□□ -1.64
SCN3A-201ENST00000283254 PABPN1LA6NDY0 278 aaKnown RBP4.78□□□□□ -1.64
SCN3A-201ENST00000283254 ZPR1O75312 459 aa4.78□□□□□ -1.64
SCN3A-201ENST00000283254 KRT85P78386 507 aa4.78□□□□□ -1.64
SCN3A-201ENST00000283254 CCDC12Q8WUD4 166 aaPredicted RBP4.78□□□□□ -1.64
SCN3A-201ENST00000283254 CFAP45Q9UL16 551 aa4.78□□□□□ -1.64
SCN3A-201ENST00000283254 AKAP2Q9Y2D5 859 aa4.78□□□□□ -1.64
SCN3A-201ENST00000283254 ATP2B1P20020 1258 aa4.78□□□□□ -1.64
SCN3A-201ENST00000283254 AIDAQ96BJ3 306 aa4.78□□□□□ -1.64
SCN3A-201ENST00000283254 LRPPRCP42704 1394 aaKnown RBP4.78□□□□□ -1.64
SCN3A-201ENST00000283254 GRIPAP1Q4V328 841 aa4.78□□□□□ -1.64
SCN3A-201ENST00000283254 CUL5Q93034 780 aa4.78□□□□□ -1.64
SCN3A-201ENST00000283254 CASKIN1Q8WXD9 1431 aa4.78□□□□□ -1.64
SCN3A-201ENST00000283254 CCDC141Q6ZP82 1450 aa4.78□□□□□ -1.64
SCN3A-201ENST00000283254 STAMBPO95630 424 aa4.78□□□□□ -1.64
SCN3A-201ENST00000283254 ME1P48163 572 aa4.78□□□□□ -1.64
SCN3A-201ENST00000283254 MRE11P49959 708 aa4.78□□□□□ -1.64
SCN3A-201ENST00000283254 PRKAR2BP31323 418 aa4.78□□□□□ -1.64
SCN3A-201ENST00000283254 USP8P40818 1118 aa4.78□□□□□ -1.64
SCN3A-201ENST00000283254 NASPP49321 788 aaPredicted RBP4.78□□□□□ -1.64
SCN3A-201ENST00000283254 IMMTQ16891 758 aaKnown RBP4.78□□□□□ -1.64
SCN3A-201ENST00000283254 LEKR1Q6ZMV7 388 aa4.78□□□□□ -1.64
SCN3A-201ENST00000283254 ZSCAN29Q8IWY8 852 aaPredicted RBP4.78□□□□□ -1.64
SCN3A-201ENST00000283254 MTMR7Q9Y216 660 aa4.78□□□□□ -1.64
SCN3A-201ENST00000283254 RNF41Q9H4P4 317 aaPredicted RBP4.77□□□□□ -1.65
SCN3A-201ENST00000283254 RAI14Q9P0K7 980 aa4.77□□□□□ -1.65
SCN3A-201ENST00000283254 B4DLN1 442 aa4.77□□□□□ -1.65
SCN3A-201ENST00000283254 KIF4AO95239 1232 aa4.77□□□□□ -1.65
SCN3A-201ENST00000283254 HMOX1P09601 288 aa4.77□□□□□ -1.65
SCN3A-201ENST00000283254 MRPL12P52815 198 aaKnown RBP4.77□□□□□ -1.65
SCN3A-201ENST00000283254 ANAPC15P60006 121 aa4.77□□□□□ -1.65
SCN3A-201ENST00000283254 TWISTNBQ3B726 338 aaPredicted RBP4.77□□□□□ -1.65
SCN3A-201ENST00000283254 CRACR2BQ8N4Y2 399 aaPredicted RBP4.77□□□□□ -1.65
SCN3A-201ENST00000283254 TANGO6Q9C0B7 1094 aa4.77□□□□□ -1.65
SCN3A-201ENST00000283254 RTEL1-TNFRSF6BF6WH68 1400 aa4.77□□□□□ -1.65
SCN3A-201ENST00000283254 POLA1P09884 1462 aaPredicted RBP4.77□□□□□ -1.65
SCN3A-201ENST00000283254 FGFR1OPO95684 399 aaKnown RBP4.77□□□□□ -1.65
SCN3A-201ENST00000283254 PDE3AQ14432 1141 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms