RNA–Protein interactions for RNA: ENST00000281187.9

VPS26B-201, Transcript of VPS26, retromer complex component B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS26B, Length 3,691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-201ENST00000281187 VGFO15240 615 aaPredicted RBP17.23■□□□□ 0.35
VPS26B-201ENST00000281187 MAP4K4O95819 1239 aaPredicted RBP17.23■□□□□ 0.35
VPS26B-201ENST00000281187 MAPK8IP2Q13387 824 aaPredicted RBP17.23■□□□□ 0.35
VPS26B-201ENST00000281187 IFT140Q96RY7 1462 aa17.23■□□□□ 0.35
VPS26B-201ENST00000281187 GOLGA6L6A8MZA4 724 aa17.23■□□□□ 0.35
VPS26B-201ENST00000281187 CABP1Q9NZU7 370 aa17.23■□□□□ 0.35
VPS26B-201ENST00000281187 HCLS1P14317 486 aaPredicted RBP17.23■□□□□ 0.35
VPS26B-201ENST00000281187 ALDH1L2Q3SY69 923 aa17.23■□□□□ 0.35
VPS26B-201ENST00000281187 JARID2Q92833 1246 aaPredicted RBP17.23■□□□□ 0.35
VPS26B-201ENST00000281187 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.23■□□□□ 0.352e-7■■■■□ 23.5
VPS26B-201ENST00000281187 TTC22Q5TAA0 569 aa17.22■□□□□ 0.35
VPS26B-201ENST00000281187 PLPPR3Q6T4P5 718 aa17.22■□□□□ 0.35
VPS26B-201ENST00000281187 RTF1Q92541 710 aaKnown RBP17.22■□□□□ 0.35
VPS26B-201ENST00000281187 ZBTB7BO15156 539 aaPredicted RBP17.22■□□□□ 0.35
VPS26B-201ENST00000281187 ZNF445P59923 1031 aa17.22■□□□□ 0.35
VPS26B-201ENST00000281187 LMOD3Q0VAK6 560 aa17.22■□□□□ 0.35
VPS26B-201ENST00000281187 EIF2AK4Q9P2K8 1649 aaKnown RBP17.21■□□□□ 0.35
VPS26B-201ENST00000281187 PLEKHM2Q8IWE5 1019 aa17.21■□□□□ 0.35
VPS26B-201ENST00000281187 TMX3Q96JJ7 454 aa17.21■□□□□ 0.35
VPS26B-201ENST00000281187 PRAM1Q96QH2 718 aa17.21■□□□□ 0.35
VPS26B-201ENST00000281187 HAP1P54257 671 aaPredicted RBP17.21■□□□□ 0.35
VPS26B-201ENST00000281187 PDCL2Q8N4E4 241 aa17.21■□□□□ 0.35
VPS26B-201ENST00000281187 PRDM15P57071 1507 aaPredicted RBP17.21■□□□□ 0.35
VPS26B-201ENST00000281187 ADCY5O95622 1261 aa17.2■□□□□ 0.34
VPS26B-201ENST00000281187 GPT2Q8TD30 523 aa17.2■□□□□ 0.34
VPS26B-201ENST00000281187 STK31Q9BXU1 1019 aa17.2■□□□□ 0.34
VPS26B-201ENST00000281187 NAP1L2Q9ULW6 460 aaPredicted RBP17.2■□□□□ 0.34
VPS26B-201ENST00000281187 TRPM1Q7Z4N2 1603 aa17.2■□□□□ 0.34
VPS26B-201ENST00000281187 ABCC2Q92887 1545 aa17.2■□□□□ 0.34
VPS26B-201ENST00000281187 SMC3Q9UQE7 1217 aa17.2■□□□□ 0.34
VPS26B-201ENST00000281187 ABCC11Q96J66 1382 aa17.2■□□□□ 0.34
VPS26B-201ENST00000281187 NPHP1O15259 732 aa17.19■□□□□ 0.34
VPS26B-201ENST00000281187 EIF4G3O43432 1585 aaKnown RBP17.19■□□□□ 0.34
VPS26B-201ENST00000281187 USP26Q9BXU7 913 aa17.19■□□□□ 0.34
VPS26B-201ENST00000281187 DIAPH3Q9NSV4 1193 aa17.19■□□□□ 0.34
VPS26B-201ENST00000281187 MIS18AQ9NYP9 233 aa17.19■□□□□ 0.34
VPS26B-201ENST00000281187 NOS1P29475 1434 aa17.19■□□□□ 0.34
VPS26B-201ENST00000281187 SLC4A2P04920 1241 aa17.19■□□□□ 0.34
VPS26B-201ENST00000281187 GSPT1P15170 499 aaKnown RBP17.19■□□□□ 0.34
VPS26B-201ENST00000281187 NLRP1Q9C000 1473 aa17.19■□□□□ 0.34
VPS26B-201ENST00000281187 MBIPQ9NS73 344 aa17.18■□□□□ 0.34
VPS26B-201ENST00000281187 NSFL1CQ9UNZ2 370 aaKnown RBP17.18■□□□□ 0.34
VPS26B-201ENST00000281187 FCHSD2O94868 740 aa17.18■□□□□ 0.34
VPS26B-201ENST00000281187 NOLC1Q14978 699 aaKnown RBP eCLIP17.18■□□□□ 0.34
VPS26B-201ENST00000281187 FGD1P98174 961 aa17.18■□□□□ 0.34
VPS26B-201ENST00000281187 HS1BP3Q53T59 392 aa17.18■□□□□ 0.34
VPS26B-201ENST00000281187 DDX54Q8TDD1 881 aaKnown RBP17.18■□□□□ 0.34
VPS26B-201ENST00000281187 F6X3S4 739 aa17.17■□□□□ 0.34
VPS26B-201ENST00000281187 RRS1Q15050 365 aaKnown RBP17.17■□□□□ 0.34
VPS26B-201ENST00000281187 NFE2L2Q16236 605 aa17.17■□□□□ 0.34
VPS26B-201ENST00000281187 KRT24Q2M2I5 525 aa17.17■□□□□ 0.34
VPS26B-201ENST00000281187 C8orf58Q8NAV2 365 aa17.17■□□□□ 0.34
VPS26B-201ENST00000281187 PHACTR3Q96KR7 559 aa17.17■□□□□ 0.34
VPS26B-201ENST00000281187 FKBP5Q13451 457 aaPredicted RBP17.17■□□□□ 0.34
VPS26B-201ENST00000281187 IL1RAPL2Q9NP60 686 aa17.17■□□□□ 0.34
VPS26B-201ENST00000281187 MCM5P33992 734 aa17.17■□□□□ 0.34
VPS26B-201ENST00000281187 FBXW7Q969H0 707 aa17.17■□□□□ 0.34
VPS26B-201ENST00000281187 KIF2CQ99661 725 aa17.17■□□□□ 0.34
VPS26B-201ENST00000281187 EMILIN1Q9Y6C2 1016 aa17.17■□□□□ 0.34
VPS26B-201ENST00000281187 VAMP4O75379 141 aa17.16■□□□□ 0.34
VPS26B-201ENST00000281187 C14orf37Q86TY3 774 aa17.16■□□□□ 0.34
VPS26B-201ENST00000281187 MRPL50Q8N5N7 158 aaKnown RBP17.16■□□□□ 0.34
VPS26B-201ENST00000281187 ZRSR1Q15695 479 aaKnown RBP17.15■□□□□ 0.34
VPS26B-201ENST00000281187 FYB1O15117 783 aa17.15■□□□□ 0.34
VPS26B-201ENST00000281187 WDR33Q9C0J8 1336 aaKnown RBP17.15■□□□□ 0.34
VPS26B-201ENST00000281187 ZNF500O60304 480 aaPredicted RBP17.15■□□□□ 0.34
VPS26B-201ENST00000281187 GIMAP6Q6P9H5 292 aa17.15■□□□□ 0.34
VPS26B-201ENST00000281187 MEIS3Q99687 375 aa17.15■□□□□ 0.34
VPS26B-201ENST00000281187 CCDC94Q9BW85 323 aaPredicted RBP17.15■□□□□ 0.34
VPS26B-201ENST00000281187 ATP6V1DQ9Y5K8 247 aa17.15■□□□□ 0.34
VPS26B-201ENST00000281187 CAMK4Q16566 473 aa17.14■□□□□ 0.33
VPS26B-201ENST00000281187 USP48Q86UV5 1035 aa17.14■□□□□ 0.33
VPS26B-201ENST00000281187 TRIM5Q9C035 493 aa17.14■□□□□ 0.33
VPS26B-201ENST00000281187 ZMYM3Q14202 1370 aa17.14■□□□□ 0.33
VPS26B-201ENST00000281187 MCM2P49736 904 aa17.14■□□□□ 0.33
VPS26B-201ENST00000281187 MCM10Q7L590 875 aa17.14■□□□□ 0.33
VPS26B-201ENST00000281187 COG3Q96JB2 828 aa17.14■□□□□ 0.33
VPS26B-201ENST00000281187 GADD45BO75293 160 aaPredicted RBP17.13■□□□□ 0.33
VPS26B-201ENST00000281187 FERMT3Q86UX7 667 aa17.13■□□□□ 0.33
VPS26B-201ENST00000281187 C16orf45Q96MC5 204 aaPredicted RBP17.12■□□□□ 0.33
VPS26B-201ENST00000281187 RPAP2Q8IXW5 612 aaPredicted RBP17.12■□□□□ 0.33
VPS26B-201ENST00000281187 CGNQ9P2M7 1197 aaKnown RBP17.12■□□□□ 0.33
VPS26B-201ENST00000281187 ZNF428Q96B54 188 aa17.12■□□□□ 0.33
VPS26B-201ENST00000281187 CDK19Q9BWU1 502 aa17.12■□□□□ 0.33
VPS26B-201ENST00000281187 CNPY2Q9Y2B0 182 aa17.12■□□□□ 0.33
VPS26B-201ENST00000281187 PBRM1Q86U86 1689 aa17.12■□□□□ 0.33
VPS26B-201ENST00000281187 SULT6B1Q6IMI4 303 aa17.11■□□□□ 0.33
VPS26B-201ENST00000281187 SMAP1Q8IYB5 467 aaPredicted RBP17.11■□□□□ 0.33
VPS26B-201ENST00000281187 PTPRTO14522 1441 aa17.11■□□□□ 0.33
VPS26B-201ENST00000281187 TRAPPC8Q9Y2L5 1435 aa17.11■□□□□ 0.33
VPS26B-201ENST00000281187 FOSBP53539 338 aa17.11■□□□□ 0.33
VPS26B-201ENST00000281187 SIRT2Q8IXJ6 389 aa17.11■□□□□ 0.33
VPS26B-201ENST00000281187 IL16Q14005 1332 aa17.11■□□□□ 0.33
VPS26B-201ENST00000281187 ABCC10Q5T3U5 1492 aa17.11■□□□□ 0.33
VPS26B-201ENST00000281187 MLECQ14165 292 aa17.1■□□□□ 0.33
VPS26B-201ENST00000281187 TPD52L1Q16890 204 aaPredicted RBP17.1■□□□□ 0.33
VPS26B-201ENST00000281187 FAM184AQ8NB25 1140 aa17.1■□□□□ 0.33
VPS26B-201ENST00000281187 BICD2Q8TD16 824 aa17.1■□□□□ 0.33
VPS26B-201ENST00000281187 TSPYL4Q9UJ04 414 aa17.1■□□□□ 0.33
VPS26B-201ENST00000281187 ERVK-7P63135 1459 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms