RNA–Protein interactions for RNA: ENST00000275820.3

NOM1-201, Transcript of nucleolar protein with MIF4G domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOM1, Length 6,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOM1-201ENST00000275820 ANKRD1Q15327 319 aa22.42■■□□□ 1.18
NOM1-201ENST00000275820 RBM33Q96EV2 1170 aaKnown RBP22.42■■□□□ 1.18
NOM1-201ENST00000275820 STK38Q15208 465 aa22.42■■□□□ 1.18
NOM1-201ENST00000275820 CCDC192P0DO97 292 aa22.42■■□□□ 1.18
NOM1-201ENST00000275820 SIL1Q9H173 461 aa22.42■■□□□ 1.18
NOM1-201ENST00000275820 RPAP2Q8IXW5 612 aaPredicted RBP22.41■■□□□ 1.18
NOM1-201ENST00000275820 ACBD3Q9H3P7 528 aa22.41■■□□□ 1.18
NOM1-201ENST00000275820 ATP2B1P20020 1258 aa22.41■■□□□ 1.18
NOM1-201ENST00000275820 HMGN5P82970 282 aaKnown RBP22.41■■□□□ 1.18
NOM1-201ENST00000275820 SKAP1Q86WV1 359 aa22.41■■□□□ 1.18
NOM1-201ENST00000275820 CAMSAP2Q08AD1 1489 aa22.4■■□□□ 1.18
NOM1-201ENST00000275820 RUFY1Q96T51 708 aa22.4■■□□□ 1.18
NOM1-201ENST00000275820 ABCC5O15440 1437 aa22.4■■□□□ 1.18
NOM1-201ENST00000275820 ZNF530Q6P9A1 599 aaPredicted RBP22.39■■□□□ 1.18
NOM1-201ENST00000275820 CTDP1Q9Y5B0 961 aaPredicted RBP22.39■■□□□ 1.18
NOM1-201ENST00000275820 CCDC141Q6ZP82 1450 aa22.39■■□□□ 1.17
NOM1-201ENST00000275820 HSP90B2PQ58FF3 399 aa22.39■■□□□ 1.17
NOM1-201ENST00000275820 RARSP54136 660 aaKnown RBP22.39■■□□□ 1.17
NOM1-201ENST00000275820 TTC39AQ5SRH9 613 aa22.39■■□□□ 1.17
NOM1-201ENST00000275820 SRGAP3O43295 1099 aa22.39■■□□□ 1.17
NOM1-201ENST00000275820 KRT85P78386 507 aa22.39■■□□□ 1.17
NOM1-201ENST00000275820 KIF6Q6ZMV9 814 aa22.39■■□□□ 1.17
NOM1-201ENST00000275820 TNMDQ9H2S6 317 aa22.39■■□□□ 1.17
NOM1-201ENST00000275820 CCDC158Q5M9N0 1113 aa22.38■■□□□ 1.17
NOM1-201ENST00000275820 NKTRP30414 1462 aaKnown RBP22.38■■□□□ 1.17
NOM1-201ENST00000275820 ARHGEF11O15085 1522 aa22.38■■□□□ 1.17
NOM1-201ENST00000275820 NCOA1Q15788 1441 aa22.38■■□□□ 1.17
NOM1-201ENST00000275820 MAP3K1Q13233 1512 aa22.38■■□□□ 1.17
NOM1-201ENST00000275820 KIAA0586Q9BVV6 1533 aa22.38■■□□□ 1.17
NOM1-201ENST00000275820 TATP17735 454 aaPredicted RBP22.37■■□□□ 1.17
NOM1-201ENST00000275820 LARP1BQ659C4 914 aaKnown RBP22.37■■□□□ 1.17
NOM1-201ENST00000275820 AK7Q96M32 723 aa22.37■■□□□ 1.17
NOM1-201ENST00000275820 MTMR7Q9Y216 660 aa22.37■■□□□ 1.17
NOM1-201ENST00000275820 IL1RAPL2Q9NP60 686 aa22.37■■□□□ 1.17
NOM1-201ENST00000275820 RBM10P98175 930 aaKnown RBP22.36■■□□□ 1.17
NOM1-201ENST00000275820 AACSQ86V21 672 aa22.36■■□□□ 1.17
NOM1-201ENST00000275820 ABCA10Q8WWZ4 1543 aa22.36■■□□□ 1.17
NOM1-201ENST00000275820 IQGAP2Q13576 1575 aa22.36■■□□□ 1.17
NOM1-201ENST00000275820 FAM177BA6PVY3 158 aa22.36■■□□□ 1.17
NOM1-201ENST00000275820 MPNDQ8N594 471 aa22.36■■□□□ 1.17
NOM1-201ENST00000275820 RRP12Q5JTH9 1297 aaKnown RBP22.36■■□□□ 1.17
NOM1-201ENST00000275820 PDRG1Q9NUG6 133 aa22.35■■□□□ 1.17
NOM1-201ENST00000275820 TTLL5Q6EMB2 1281 aa22.35■■□□□ 1.17
NOM1-201ENST00000275820 PRM3Q9NNZ6 103 aa22.35■■□□□ 1.17
NOM1-201ENST00000275820 CC2D2AQ9P2K1 1620 aa22.35■■□□□ 1.17
NOM1-201ENST00000275820 CCP110O43303 1012 aa22.35■■□□□ 1.17
NOM1-201ENST00000275820 CWC27Q6UX04 472 aaKnown RBP22.35■■□□□ 1.17
NOM1-201ENST00000275820 SSH1Q8WYL5 1049 aa22.34■■□□□ 1.17
NOM1-201ENST00000275820 THUMPD2Q9BTF0 503 aaKnown RBP22.34■■□□□ 1.17
NOM1-201ENST00000275820 BLOC1S2Q6QNY1 142 aa22.34■■□□□ 1.17
NOM1-201ENST00000275820 RBM42Q9BTD8 480 aaKnown RBP22.34■■□□□ 1.17
NOM1-201ENST00000275820 JAKMIP1Q96N16 626 aaKnown RBP22.34■■□□□ 1.17
NOM1-201ENST00000275820 CNNM1Q9NRU3 951 aa22.34■■□□□ 1.17
NOM1-201ENST00000275820 ME1P48163 572 aa22.33■■□□□ 1.17
NOM1-201ENST00000275820 JMYQ8N9B5 988 aa22.33■■□□□ 1.17
NOM1-201ENST00000275820 CCDC43Q96MW1 224 aaKnown RBP22.33■■□□□ 1.17
NOM1-201ENST00000275820 MAGI1Q96QZ7 1491 aaPredicted RBP22.33■■□□□ 1.17
NOM1-201ENST00000275820 CAGE1Q8TC20 777 aa22.33■■□□□ 1.17
NOM1-201ENST00000275820 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.33■■□□□ 1.177e-7■■□□□ 13
NOM1-201ENST00000275820 RAPGEF3O95398 923 aa22.33■■□□□ 1.16
NOM1-201ENST00000275820 FILIP1LQ4L180 1135 aa22.33■■□□□ 1.16
NOM1-201ENST00000275820 ZSCAN31Q96LW9 406 aaPredicted RBP22.32■■□□□ 1.16
NOM1-201ENST00000275820 MYL6BP14649 208 aa22.32■■□□□ 1.16
NOM1-201ENST00000275820 ESPNB1AK53 854 aa22.31■■□□□ 1.16
NOM1-201ENST00000275820 EXOC6BQ9Y2D4 811 aa22.31■■□□□ 1.16
NOM1-201ENST00000275820 CABP4P57796 275 aa22.31■■□□□ 1.16
NOM1-201ENST00000275820 EPS15P42566 896 aa22.31■■□□□ 1.16
NOM1-201ENST00000275820 ALDH1L2Q3SY69 923 aa22.31■■□□□ 1.16
NOM1-201ENST00000275820 OFD1O75665 1012 aa22.31■■□□□ 1.16
NOM1-201ENST00000275820 PATL2C9JE40 543 aaKnown RBP22.3■■□□□ 1.16
NOM1-201ENST00000275820 PROSER2Q86WR7 435 aaPredicted RBP22.3■■□□□ 1.16
NOM1-201ENST00000275820 SMARCE1Q969G3 411 aa22.3■■□□□ 1.16
NOM1-201ENST00000275820 SPATA32Q96LK8 384 aa22.3■■□□□ 1.16
NOM1-201ENST00000275820 LRPPRCP42704 1394 aaKnown RBP22.3■■□□□ 1.16
NOM1-201ENST00000275820 SERPINC1P01008 464 aa22.3■■□□□ 1.16
NOM1-201ENST00000275820 BTBD11A6QL63 1104 aa22.29■■□□□ 1.16
NOM1-201ENST00000275820 THEMISQ8N1K5 641 aaPredicted RBP22.29■■□□□ 1.16
NOM1-201ENST00000275820 BRPF1P55201 1214 aaPredicted RBP22.29■■□□□ 1.16
NOM1-201ENST00000275820 NUTM1Q86Y26 1132 aa22.29■■□□□ 1.16
NOM1-201ENST00000275820 ABCC11Q96J66 1382 aa22.29■■□□□ 1.16
NOM1-201ENST00000275820 CDR1P51861 262 aa22.29■■□□□ 1.16
NOM1-201ENST00000275820 NUDT16Q96DE0 195 aaKnown RBP22.29■■□□□ 1.16
NOM1-201ENST00000275820 TXLNAP40222 546 aa22.28■■□□□ 1.16
NOM1-201ENST00000275820 CUL7Q14999 1698 aa22.28■■□□□ 1.16
NOM1-201ENST00000275820 SAMD1Q6SPF0 538 aaPredicted RBP22.28■■□□□ 1.16
NOM1-201ENST00000275820 MIS18AQ9NYP9 233 aa22.28■■□□□ 1.16
NOM1-201ENST00000275820 RPRD2Q5VT52 1461 aaKnown RBP22.28■■□□□ 1.16
NOM1-201ENST00000275820 MCM10Q7L590 875 aa22.27■■□□□ 1.16
NOM1-201ENST00000275820 ERCC4Q92889 916 aaPredicted RBP22.27■■□□□ 1.16
NOM1-201ENST00000275820 SLC3A2P08195 630 aaKnown RBP22.27■■□□□ 1.16
NOM1-201ENST00000275820 DUSP27Q5VZP5 1158 aa22.27■■□□□ 1.16
NOM1-201ENST00000275820 PPP6R1Q9UPN7 881 aa22.27■■□□□ 1.16
NOM1-201ENST00000275820 SPG7Q9UQ90 795 aa22.27■■□□□ 1.16
NOM1-201ENST00000275820 SLC26A8Q96RN1 970 aa22.27■■□□□ 1.16
NOM1-201ENST00000275820 SMARCA5O60264 1052 aaPredicted RBP22.27■■□□□ 1.16
NOM1-201ENST00000275820 NUP62CLQ9H1M0 184 aa22.27■■□□□ 1.16
NOM1-201ENST00000275820 CCDC61Q9Y6R9 512 aa22.27■■□□□ 1.15
NOM1-201ENST00000275820 GNAT3A8MTJ3 354 aa22.26■■□□□ 1.15
NOM1-201ENST00000275820 MX1P20591 662 aa22.26■■□□□ 1.15
NOM1-201ENST00000275820 MAGEC2Q9UBF1 373 aaPredicted RBP22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms