RNA–Protein interactions for RNA: ENST00000270722.9

PRDM16-201, Transcript of PR/SET domain 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRDM16, Length 8,690 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-201ENST00000270722 CYB5RLQ6IPT4 315 aa15.6■□□□□ 0.09
PRDM16-201ENST00000270722 GOLIM4O00461 696 aa15.6■□□□□ 0.09
PRDM16-201ENST00000270722 TATP17735 454 aaPredicted RBP15.59■□□□□ 0.09
PRDM16-201ENST00000270722 FOXD4L5Q5VV16 416 aaPredicted RBP15.59■□□□□ 0.09
PRDM16-201ENST00000270722 FOXD4L4Q8WXT5 416 aaPredicted RBP15.59■□□□□ 0.09
PRDM16-201ENST00000270722 THEMISQ8N1K5 641 aaPredicted RBP15.59■□□□□ 0.09
PRDM16-201ENST00000270722 MPHOSPH8Q99549 860 aa15.59■□□□□ 0.09
PRDM16-201ENST00000270722 TDRD9Q8NDG6 1382 aaKnown RBP15.59■□□□□ 0.09
PRDM16-201ENST00000270722 FSD1Q9BTV5 496 aa15.58■□□□□ 0.09
PRDM16-201ENST00000270722 PANK3Q9H999 370 aa15.58■□□□□ 0.09
PRDM16-201ENST00000270722 CNNM1Q9NRU3 951 aa15.58■□□□□ 0.08
PRDM16-201ENST00000270722 CGNQ9P2M7 1197 aaKnown RBP15.58■□□□□ 0.08
PRDM16-201ENST00000270722 ZNF652Q9Y2D9 606 aa15.58■□□□□ 0.08
PRDM16-201ENST00000270722 ELL2O00472 640 aaPredicted RBP15.58■□□□□ 0.08
PRDM16-201ENST00000270722 MPHOSPH6Q99547 160 aaKnown RBP15.58■□□□□ 0.08
PRDM16-201ENST00000270722 PPM1EQ8WY54 764 aa15.57■□□□□ 0.08
PRDM16-201ENST00000270722 L3MBTL2Q969R5 705 aa15.57■□□□□ 0.08
PRDM16-201ENST00000270722 FOXD4L1Q9NU39 408 aa15.57■□□□□ 0.08
PRDM16-201ENST00000270722 KIF3CO14782 793 aa15.57■□□□□ 0.08
PRDM16-201ENST00000270722 STAMBPO95630 424 aa15.57■□□□□ 0.08
PRDM16-201ENST00000270722 NUTM2DQ5VT03 806 aaPredicted RBP15.57■□□□□ 0.08
PRDM16-201ENST00000270722 UQCRHLA0A096LP55 91 aa15.57■□□□□ 0.08
PRDM16-201ENST00000270722 UQCRHP07919 91 aa15.57■□□□□ 0.08
PRDM16-201ENST00000270722 WASF1Q92558 559 aa15.57■□□□□ 0.08
PRDM16-201ENST00000270722 CTNNA3Q9UI47 895 aa15.56■□□□□ 0.08
PRDM16-201ENST00000270722 NLRP6P59044 892 aa15.56■□□□□ 0.08
PRDM16-201ENST00000270722 DAAM2Q86T65 1068 aa15.56■□□□□ 0.08
PRDM16-201ENST00000270722 CCDC150Q8NCX0 1101 aa15.56■□□□□ 0.08
PRDM16-201ENST00000270722 FYCO1Q9BQS8 1478 aa15.56■□□□□ 0.08
PRDM16-201ENST00000270722 SPG7Q9UQ90 795 aa15.55■□□□□ 0.08
PRDM16-201ENST00000270722 IPO4Q8TEX9 1081 aaKnown RBP15.55■□□□□ 0.08
PRDM16-201ENST00000270722 PDILTQ8N807 584 aa15.55■□□□□ 0.08
PRDM16-201ENST00000270722 ZNF622Q969S3 477 aaKnown RBP eCLIP15.55■□□□□ 0.08
PRDM16-201ENST00000270722 TNNT1P13805 278 aa15.55■□□□□ 0.08
PRDM16-201ENST00000270722 CCDC181Q5TID7 509 aa15.55■□□□□ 0.08
PRDM16-201ENST00000270722 CUX1P39880 1505 aa15.54■□□□□ 0.08
PRDM16-201ENST00000270722 FAM69CQ0P6D2 419 aa15.54■□□□□ 0.08
PRDM16-201ENST00000270722 ZBTB17Q13105 803 aa15.54■□□□□ 0.08
PRDM16-201ENST00000270722 JAKMIP3Q5VZ66 844 aa15.54■□□□□ 0.08
PRDM16-201ENST00000270722 FERMT1Q9BQL6 677 aa15.54■□□□□ 0.08
PRDM16-201ENST00000270722 PRDM2Q13029 1718 aa15.54■□□□□ 0.08
PRDM16-201ENST00000270722 SLF2Q8IX21 1173 aa15.54■□□□□ 0.08
PRDM16-201ENST00000270722 MYOM3Q5VTT5 1437 aa15.54■□□□□ 0.08
PRDM16-201ENST00000270722 ATP2B2Q01814 1243 aa15.54■□□□□ 0.08
PRDM16-201ENST00000270722 TICAM2Q86XR7 235 aa15.54■□□□□ 0.08
PRDM16-201ENST00000270722 CENPHQ9H3R5 247 aa15.54■□□□□ 0.08
PRDM16-201ENST00000270722 CDC45O75419 566 aa15.54■□□□□ 0.08
PRDM16-201ENST00000270722 RBM5P52756 815 aaKnown RBP eCLIP15.54■□□□□ 0.08
PRDM16-201ENST00000270722 GTPBP4Q9BZE4 634 aaKnown RBP15.54■□□□□ 0.08
PRDM16-201ENST00000270722 ANKRD62A6NC57 917 aa15.54■□□□□ 0.08
PRDM16-201ENST00000270722 EPB41L2O43491 1005 aaKnown RBP15.53■□□□□ 0.08
PRDM16-201ENST00000270722 EHMT1Q9H9B1 1298 aa15.53■□□□□ 0.08
PRDM16-201ENST00000270722 SPDYE4A6NLX3 237 aa15.53■□□□□ 0.08
PRDM16-201ENST00000270722 PPFIBP1Q86W92 1011 aa15.53■□□□□ 0.08
PRDM16-201ENST00000270722 USP47Q96K76 1375 aa15.53■□□□□ 0.08
PRDM16-201ENST00000270722 ST20-MTHFSA0A0A6YYL1 179 aa15.53■□□□□ 0.08
PRDM16-201ENST00000270722 VPS36Q86VN1 386 aa15.53■□□□□ 0.08
PRDM16-201ENST00000270722 ABTB2Q8N961 1025 aa15.53■□□□□ 0.08
PRDM16-201ENST00000270722 ANAPC15P60006 121 aa15.53■□□□□ 0.08
PRDM16-201ENST00000270722 RRP7AQ9Y3A4 280 aaKnown RBP15.53■□□□□ 0.08
PRDM16-201ENST00000270722 ZBED9Q6R2W3 1325 aa15.53■□□□□ 0.08
PRDM16-201ENST00000270722 CADPSQ9ULU8 1353 aa15.53■□□□□ 0.08
PRDM16-201ENST00000270722 RBM10P98175 930 aaKnown RBP15.52■□□□□ 0.08
PRDM16-201ENST00000270722 PROSER2Q86WR7 435 aaPredicted RBP15.52■□□□□ 0.08
PRDM16-201ENST00000270722 ZMAT2Q96NC0 199 aaKnown RBP15.52■□□□□ 0.08
PRDM16-201ENST00000270722 TTC39AQ5SRH9 613 aa15.52■□□□□ 0.08
PRDM16-201ENST00000270722 RAB34Q9BZG1 259 aa15.52■□□□□ 0.08
PRDM16-201ENST00000270722 CBFA2T2O43439 604 aa15.52■□□□□ 0.08
PRDM16-201ENST00000270722 DNAAF4Q8WXU2 420 aa15.52■□□□□ 0.08
PRDM16-201ENST00000270722 SH2D4BQ5SQS7 431 aa15.52■□□□□ 0.07
PRDM16-201ENST00000270722 ERICH4A6NGS2 130 aa15.52■□□□□ 0.07
PRDM16-201ENST00000270722 STK38Q15208 465 aa15.52■□□□□ 0.07
PRDM16-201ENST00000270722 DRC1Q96MC2 740 aa15.52■□□□□ 0.07
PRDM16-201ENST00000270722 PLIN1O60240 522 aa15.52■□□□□ 0.07
PRDM16-201ENST00000270722 PPM1FP49593 454 aaPredicted RBP15.52■□□□□ 0.07
PRDM16-201ENST00000270722 KIF20AO95235 890 aa15.51■□□□□ 0.07
PRDM16-201ENST00000270722 IVLP07476 585 aa15.51■□□□□ 0.07
PRDM16-201ENST00000270722 ZNF76P36508 570 aa15.51■□□□□ 0.07
PRDM16-201ENST00000270722 PABPN1LA6NDY0 278 aaKnown RBP15.51■□□□□ 0.07
PRDM16-201ENST00000270722 ARID4AP29374 1257 aaPredicted RBP15.51■□□□□ 0.07
PRDM16-201ENST00000270722 MNAT1P51948 309 aa15.51■□□□□ 0.07
PRDM16-201ENST00000270722 MCM3P25205 808 aa15.51■□□□□ 0.07
PRDM16-201ENST00000270722 ZNF692Q9BU19 519 aaPredicted RBP15.51■□□□□ 0.07
PRDM16-201ENST00000270722 SRCIN1Q9C0H9 1055 aa15.51■□□□□ 0.07
PRDM16-201ENST00000270722 CCDC69A6NI79 296 aa15.51■□□□□ 0.07
PRDM16-201ENST00000270722 ATF7IPQ6VMQ6 1270 aa15.5■□□□□ 0.07
PRDM16-201ENST00000270722 AIMP1Q12904 312 aaKnown RBP15.5■□□□□ 0.07
PRDM16-201ENST00000270722 LRRC45Q96CN5 670 aa15.5■□□□□ 0.07
PRDM16-201ENST00000270722 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.5■□□□□ 0.07
PRDM16-201ENST00000270722 V9GYY5 206 aaPredicted RBP15.5■□□□□ 0.07
PRDM16-201ENST00000270722 MATR3P43243 847 aaKnown RBP eCLIP15.5■□□□□ 0.072e-9■■■■■ 33.8
PRDM16-201ENST00000270722 SLC4A3P48751 1232 aa15.5■□□□□ 0.07
PRDM16-201ENST00000270722 FAM184BQ9ULE4 1060 aa15.5■□□□□ 0.07
PRDM16-201ENST00000270722 KRT32Q14532 448 aa15.49■□□□□ 0.07
PRDM16-201ENST00000270722 LRRCC1Q9C099 1032 aa15.49■□□□□ 0.07
PRDM16-201ENST00000270722 CEP131Q9UPN4 1083 aa15.49■□□□□ 0.07
PRDM16-201ENST00000270722 SMC1AQ14683 1233 aaKnown RBP15.49■□□□□ 0.07
PRDM16-201ENST00000270722 CEP63Q96MT8 703 aa15.49■□□□□ 0.07
PRDM16-201ENST00000270722 FOXD4L6Q3SYB3 417 aaPredicted RBP15.49■□□□□ 0.07
PRDM16-201ENST00000270722 FOXD4L3Q6VB84 417 aaPredicted RBP15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms