RNA–Protein interactions for RNA: ENST00000265956.8

GAPVD1-201, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 5 BASIC

Gene GAPVD1, Length 2,667 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-201ENST00000265956 MCM10Q7L590 875 aa9.45□□□□□ -0.9
GAPVD1-201ENST00000265956 MRPL50Q8N5N7 158 aaKnown RBP9.45□□□□□ -0.9
GAPVD1-201ENST00000265956 CCDC61Q9Y6R9 512 aa9.45□□□□□ -0.9
GAPVD1-201ENST00000265956 MAP2P11137 1827 aaKnown RBP9.45□□□□□ -0.9
GAPVD1-201ENST00000265956 MIS18AQ9NYP9 233 aa9.45□□□□□ -0.9
GAPVD1-201ENST00000265956 A2ML1A8K2U0 1454 aa9.44□□□□□ -0.9
GAPVD1-201ENST00000265956 FAM135BQ49AJ0 1406 aa9.44□□□□□ -0.9
GAPVD1-201ENST00000265956 SLC26A8Q96RN1 970 aa9.44□□□□□ -0.9
GAPVD1-201ENST00000265956 HSCBQ8IWL3 235 aa9.43□□□□□ -0.9
GAPVD1-201ENST00000265956 SIRT2Q8IXJ6 389 aa9.43□□□□□ -0.9
GAPVD1-201ENST00000265956 IFT57Q9NWB7 429 aa9.43□□□□□ -0.9
GAPVD1-201ENST00000265956 CLTCQ00610 1675 aaKnown RBP9.43□□□□□ -0.9
GAPVD1-201ENST00000265956 CALD1Q05682 793 aaKnown RBP9.42□□□□□ -0.9
GAPVD1-201ENST00000265956 HSP90AB2PQ58FF8 381 aa9.42□□□□□ -0.9
GAPVD1-201ENST00000265956 CFAP44Q96MT7 982 aa9.42□□□□□ -0.9
GAPVD1-201ENST00000265956 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.42□□□□□ -0.9
GAPVD1-201ENST00000265956 MED14O60244 1454 aa9.42□□□□□ -0.9
GAPVD1-201ENST00000265956 PRR36Q9H6K5 1346 aa9.42□□□□□ -0.9
GAPVD1-201ENST00000265956 HSP90AA1P07900 732 aaKnown RBP9.42□□□□□ -0.9
GAPVD1-201ENST00000265956 CEBPAP49715 358 aaPredicted RBP9.42□□□□□ -0.9
GAPVD1-201ENST00000265956 RBM42Q9BTD8 480 aaKnown RBP9.42□□□□□ -0.9
GAPVD1-201ENST00000265956 EIF4A2Q14240 407 aaKnown RBP9.41□□□□□ -0.9
GAPVD1-201ENST00000265956 C16orf71Q8IYS4 520 aaPredicted RBP9.41□□□□□ -0.9
GAPVD1-201ENST00000265956 ANO8Q9HCE9 1232 aaPredicted RBP9.41□□□□□ -0.9
GAPVD1-201ENST00000265956 ZMYM3Q14202 1370 aa9.41□□□□□ -0.9
GAPVD1-201ENST00000265956 EDC4Q6P2E9 1401 aaKnown RBP9.41□□□□□ -0.9
GAPVD1-201ENST00000265956 KIF20BQ96Q89 1820 aa9.41□□□□□ -0.9
GAPVD1-201ENST00000265956 CPS1P31327 1500 aa9.4□□□□□ -0.9
GAPVD1-201ENST00000265956 ANKRD26Q9UPS8 1709 aa9.4□□□□□ -0.9
GAPVD1-201ENST00000265956 ACEP12821 1306 aa9.4□□□□□ -0.9
GAPVD1-201ENST00000265956 FOXO3O43524 673 aa9.4□□□□□ -0.9
GAPVD1-201ENST00000265956 PLEKHG5O94827 1062 aa9.4□□□□□ -0.9
GAPVD1-201ENST00000265956 HSP90AB1P08238 724 aaKnown RBP9.4□□□□□ -0.9
GAPVD1-201ENST00000265956 ZNF853P0CG23 659 aa9.4□□□□□ -0.9
GAPVD1-201ENST00000265956 NUTM2GQ5VZR2 741 aa9.4□□□□□ -0.9
GAPVD1-201ENST00000265956 TBC1D9Q6ZT07 1266 aa9.4□□□□□ -0.9
GAPVD1-201ENST00000265956 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.4□□□□□ -0.9
GAPVD1-201ENST00000265956 MCM4P33991 863 aa9.39□□□□□ -0.91
GAPVD1-201ENST00000265956 LMOD3Q0VAK6 560 aa9.39□□□□□ -0.91
GAPVD1-201ENST00000265956 SLC4A10Q6U841 1118 aa9.39□□□□□ -0.91
GAPVD1-201ENST00000265956 NECTIN2Q92692 538 aa9.39□□□□□ -0.91
GAPVD1-201ENST00000265956 CHMP5Q9NZZ3 219 aa9.39□□□□□ -0.91
GAPVD1-201ENST00000265956 ATP7BP35670 1465 aa9.39□□□□□ -0.91
GAPVD1-201ENST00000265956 CPSF1Q10570 1443 aaKnown RBP9.39□□□□□ -0.91
GAPVD1-201ENST00000265956 SMARCA5O60264 1052 aaPredicted RBP9.39□□□□□ -0.91
GAPVD1-201ENST00000265956 CD2BP2O95400 341 aaKnown RBP9.39□□□□□ -0.91
GAPVD1-201ENST00000265956 ZNF428Q96B54 188 aa9.39□□□□□ -0.91
GAPVD1-201ENST00000265956 GCC1Q96CN9 775 aa9.39□□□□□ -0.91
GAPVD1-201ENST00000265956 BMP2KLQ5H9B9 411 aa9.38□□□□□ -0.91
GAPVD1-201ENST00000265956 OTUD7AQ8TE49 926 aaPredicted RBP9.38□□□□□ -0.91
GAPVD1-201ENST00000265956 ROBO2Q9HCK4 1378 aa9.38□□□□□ -0.91
GAPVD1-201ENST00000265956 LTKP29376 864 aa9.38□□□□□ -0.91
GAPVD1-201ENST00000265956 ARHGAP45Q92619 1136 aa9.38□□□□□ -0.91
GAPVD1-201ENST00000265956 API5Q9BZZ5 524 aaKnown RBP9.38□□□□□ -0.91
GAPVD1-201ENST00000265956 ABCC4O15439 1325 aa9.38□□□□□ -0.91
GAPVD1-201ENST00000265956 SLC4A2P04920 1241 aa9.38□□□□□ -0.91
GAPVD1-201ENST00000265956 HDGFP51858 240 aaKnown RBP9.38□□□□□ -0.91
GAPVD1-201ENST00000265956 ZNF692Q9BU19 519 aaPredicted RBP9.38□□□□□ -0.91
GAPVD1-201ENST00000265956 TTC21BQ7Z4L5 1316 aa9.37□□□□□ -0.91
GAPVD1-201ENST00000265956 F6X3S4 739 aa9.37□□□□□ -0.91
GAPVD1-201ENST00000265956 PPP6R1Q9UPN7 881 aa9.37□□□□□ -0.91
GAPVD1-201ENST00000265956 TRAK2O60296 914 aa9.37□□□□□ -0.91
GAPVD1-201ENST00000265956 GSPT1P15170 499 aaKnown RBP9.37□□□□□ -0.91
GAPVD1-201ENST00000265956 BRPF1P55201 1214 aaPredicted RBP9.37□□□□□ -0.91
GAPVD1-201ENST00000265956 CHMP4BQ9H444 224 aaKnown RBP9.37□□□□□ -0.91
GAPVD1-201ENST00000265956 RBM25P49756 843 aaKnown RBP9.36□□□□□ -0.91
GAPVD1-201ENST00000265956 LTV1Q96GA3 475 aaPredicted RBP9.36□□□□□ -0.91
GAPVD1-201ENST00000265956 MEIS3Q99687 375 aa9.36□□□□□ -0.91
GAPVD1-201ENST00000265956 PANK2Q9BZ23 570 aa9.36□□□□□ -0.91
GAPVD1-201ENST00000265956 CDK12Q9NYV4 1490 aaPredicted RBP9.36□□□□□ -0.91
GAPVD1-201ENST00000265956 NGDNQ8NEJ9 315 aaKnown RBP9.36□□□□□ -0.91
GAPVD1-201ENST00000265956 KIF2CQ99661 725 aa9.36□□□□□ -0.91
GAPVD1-201ENST00000265956 AMPHP49418 695 aa9.35□□□□□ -0.91
GAPVD1-201ENST00000265956 G2E3Q7L622 706 aa9.35□□□□□ -0.91
GAPVD1-201ENST00000265956 C14orf37Q86TY3 774 aa9.35□□□□□ -0.91
GAPVD1-201ENST00000265956 PLEKHM2Q8IWE5 1019 aa9.35□□□□□ -0.91
GAPVD1-201ENST00000265956 DIP2BQ9P265 1576 aa9.35□□□□□ -0.91
GAPVD1-201ENST00000265956 PTCH1Q13635 1447 aa9.35□□□□□ -0.91
GAPVD1-201ENST00000265956 AATKQ6ZMQ8 1374 aa9.35□□□□□ -0.91
GAPVD1-201ENST00000265956 TNRQ92752 1358 aa9.35□□□□□ -0.91
GAPVD1-201ENST00000265956 GOLGA6L3A6NEY3 463 aa9.35□□□□□ -0.91
GAPVD1-201ENST00000265956 RTF1Q92541 710 aaKnown RBP9.35□□□□□ -0.91
GAPVD1-201ENST00000265956 TSPYL4Q9UJ04 414 aa9.35□□□□□ -0.91
GAPVD1-201ENST00000265956 RIMBP3CA6NJZ7 1639 aa9.35□□□□□ -0.91
GAPVD1-201ENST00000265956 RIMBP3BA6NNM3 1639 aa9.35□□□□□ -0.91
GAPVD1-201ENST00000265956 RIMBP3Q9UFD9 1639 aa9.35□□□□□ -0.91
GAPVD1-201ENST00000265956 DLC1Q96QB1 1528 aa9.34□□□□□ -0.91
GAPVD1-201ENST00000265956 DLG5Q8TDM6 1919 aa9.34□□□□□ -0.91
GAPVD1-201ENST00000265956 MTHFSDQ2M296 383 aaKnown RBP9.34□□□□□ -0.91
GAPVD1-201ENST00000265956 TSHZ3Q63HK5 1081 aa9.34□□□□□ -0.91
GAPVD1-201ENST00000265956 TNPO1Q92973 898 aaKnown RBP9.34□□□□□ -0.91
GAPVD1-201ENST00000265956 RBM33Q96EV2 1170 aaKnown RBP9.34□□□□□ -0.91
GAPVD1-201ENST00000265956 MAP3K19Q56UN5 1328 aa9.34□□□□□ -0.91
GAPVD1-201ENST00000265956 CDC42BPGQ6DT37 1551 aa9.34□□□□□ -0.91
GAPVD1-201ENST00000265956 SPATA31D1Q6ZQQ2 1576 aa9.34□□□□□ -0.91
GAPVD1-201ENST00000265956 ZBTB7CA1YPR0 619 aa9.34□□□□□ -0.91
GAPVD1-201ENST00000265956 CHL1O00533 1208 aa9.34□□□□□ -0.91
GAPVD1-201ENST00000265956 CDC45O75419 566 aa9.34□□□□□ -0.91
GAPVD1-201ENST00000265956 MSH6P52701 1360 aa9.33□□□□□ -0.92
GAPVD1-201ENST00000265956 XRCC6P12956 609 aaKnown RBP eCLIP9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms