RNA–Protein interactions for RNA: ENST00000264723.8

CSPG5-201, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CSPG5, Length 4,080 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-201ENST00000264723 FAM43AQ8N2R8 423 aa24.26■■□□□ 1.47
CSPG5-201ENST00000264723 C8orf58Q8NAV2 365 aa24.26■■□□□ 1.47
CSPG5-201ENST00000264723 SSFA2P28290 1259 aa24.26■■□□□ 1.47
CSPG5-201ENST00000264723 HSP90AB2PQ58FF8 381 aa24.25■■□□□ 1.47
CSPG5-201ENST00000264723 MAP4K4O95819 1239 aaPredicted RBP24.25■■□□□ 1.47
CSPG5-201ENST00000264723 UBTFL1P0CB47 393 aaPredicted RBP24.24■■□□□ 1.47
CSPG5-201ENST00000264723 POLKQ9UBT6 870 aa24.24■■□□□ 1.47
CSPG5-201ENST00000264723 A0A1W2PP64 1363 aa24.24■■□□□ 1.47
CSPG5-201ENST00000264723 ANKRD36BQ8N2N9 1353 aa24.24■■□□□ 1.47
CSPG5-201ENST00000264723 ACEP12821 1306 aa24.24■■□□□ 1.47
CSPG5-201ENST00000264723 TAF7LQ5H9L4 462 aa24.24■■□□□ 1.47
CSPG5-201ENST00000264723 CDC42BPAQ5VT25 1732 aa24.24■■□□□ 1.47
CSPG5-201ENST00000264723 ATP10AO60312 1499 aa24.24■■□□□ 1.47
CSPG5-201ENST00000264723 TTC37Q6PGP7 1564 aa24.23■■□□□ 1.47
CSPG5-201ENST00000264723 CCDC27Q2M243 656 aa24.23■■□□□ 1.47
CSPG5-201ENST00000264723 AEBP1Q8IUX7 1158 aa24.23■■□□□ 1.47
CSPG5-201ENST00000264723 MAST1Q9Y2H9 1570 aa24.23■■□□□ 1.47
CSPG5-201ENST00000264723 NASPP49321 788 aaPredicted RBP24.23■■□□□ 1.47
CSPG5-201ENST00000264723 ZNF530Q6P9A1 599 aaPredicted RBP24.23■■□□□ 1.47
CSPG5-201ENST00000264723 GOLGA6L4A6NEF3 574 aa24.22■■□□□ 1.47
CSPG5-201ENST00000264723 ATP7AQ04656 1500 aa24.22■■□□□ 1.47
CSPG5-201ENST00000264723 PTPRTO14522 1441 aa24.22■■□□□ 1.47
CSPG5-201ENST00000264723 SURF6O75683 361 aaKnown RBP24.22■■□□□ 1.47
CSPG5-201ENST00000264723 XRCC6P12956 609 aaKnown RBP eCLIP24.22■■□□□ 1.47
CSPG5-201ENST00000264723 SYTL4Q96C24 671 aaPredicted RBP24.22■■□□□ 1.47
CSPG5-201ENST00000264723 ZBTB40Q9NUA8 1239 aa24.22■■□□□ 1.47
CSPG5-201ENST00000264723 HDAC1Q13547 482 aaPredicted RBP24.22■■□□□ 1.47
CSPG5-201ENST00000264723 CCDC30Q5VVM6 783 aa24.22■■□□□ 1.47
CSPG5-201ENST00000264723 GPATCH3Q96I76 525 aa24.22■■□□□ 1.47
CSPG5-201ENST00000264723 ARHGEF5Q12774 1597 aa24.21■■□□□ 1.47
CSPG5-201ENST00000264723 NEXNQ0ZGT2 675 aa24.21■■□□□ 1.47
CSPG5-201ENST00000264723 NPC1L1Q9UHC9 1359 aa24.21■■□□□ 1.47
CSPG5-201ENST00000264723 PTMSP20962 102 aa24.21■■□□□ 1.47
CSPG5-201ENST00000264723 NUCB1Q02818 461 aa24.2■■□□□ 1.47
CSPG5-201ENST00000264723 IL1RAPL2Q9NP60 686 aa24.2■■□□□ 1.47
CSPG5-201ENST00000264723 ALDH1L2Q3SY69 923 aa24.2■■□□□ 1.46
CSPG5-201ENST00000264723 HDAC5Q9UQL6 1122 aa24.2■■□□□ 1.46
CSPG5-201ENST00000264723 HSP90AA2PQ14568 343 aaPredicted RBP24.17■■□□□ 1.46
CSPG5-201ENST00000264723 RIC3Q7Z5B4 369 aa24.17■■□□□ 1.46
CSPG5-201ENST00000264723 VAMP4O75379 141 aa24.17■■□□□ 1.46
CSPG5-201ENST00000264723 NUCB2P80303 420 aa24.17■■□□□ 1.46
CSPG5-201ENST00000264723 ERVK-7P63135 1459 aa24.17■■□□□ 1.46
CSPG5-201ENST00000264723 DIAPH3Q9NSV4 1193 aa24.16■■□□□ 1.46
CSPG5-201ENST00000264723 SMC5Q8IY18 1101 aa24.16■■□□□ 1.46
CSPG5-201ENST00000264723 IFIT2P09913 472 aaKnown RBP24.15■■□□□ 1.46
CSPG5-201ENST00000264723 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP24.15■■□□□ 1.46
CSPG5-201ENST00000264723 RABEP1Q15276 862 aa24.15■■□□□ 1.46
CSPG5-201ENST00000264723 UPF3BQ9BZI7 483 aaKnown RBP24.15■■□□□ 1.46
CSPG5-201ENST00000264723 IFT57Q9NWB7 429 aa24.15■■□□□ 1.46
CSPG5-201ENST00000264723 PLEKHO1Q53GL0 409 aaPredicted RBP24.14■■□□□ 1.46
CSPG5-201ENST00000264723 BMP2KLQ5H9B9 411 aa24.14■■□□□ 1.46
CSPG5-201ENST00000264723 PRDM15P57071 1507 aaPredicted RBP24.14■■□□□ 1.45
CSPG5-201ENST00000264723 TNRQ92752 1358 aa24.13■■□□□ 1.45
CSPG5-201ENST00000264723 ABCC11Q96J66 1382 aa24.13■■□□□ 1.45
CSPG5-201ENST00000264723 GNAI3P08754 354 aa24.13■■□□□ 1.45
CSPG5-201ENST00000264723 ZRSR1Q15695 479 aaKnown RBP24.13■■□□□ 1.45
CSPG5-201ENST00000264723 NPATQ14207 1427 aa24.13■■□□□ 1.45
CSPG5-201ENST00000264723 MEIS3Q99687 375 aa24.13■■□□□ 1.45
CSPG5-201ENST00000264723 LARP6Q9BRS8 491 aaKnown RBP24.13■■□□□ 1.45
CSPG5-201ENST00000264723 GNAI2P04899 355 aa24.13■■□□□ 1.45
CSPG5-201ENST00000264723 POGZQ7Z3K3 1410 aa24.13■■□□□ 1.45
CSPG5-201ENST00000264723 DDX58O95786 925 aaKnown RBP24.12■■□□□ 1.45
CSPG5-201ENST00000264723 MRPL50Q8N5N7 158 aaKnown RBP24.12■■□□□ 1.45
CSPG5-201ENST00000264723 RIMS2Q9UQ26 1411 aa24.12■■□□□ 1.45
CSPG5-201ENST00000264723 OTUD7AQ8TE49 926 aaPredicted RBP24.12■■□□□ 1.45
CSPG5-201ENST00000264723 STRN4Q9NRL3 753 aa24.12■■□□□ 1.45
CSPG5-201ENST00000264723 PHF8Q9UPP1 1060 aa24.12■■□□□ 1.45
CSPG5-201ENST00000264723 INSRP06213 1382 aa24.12■■□□□ 1.45
CSPG5-201ENST00000264723 USP19O94966 1318 aa24.11■■□□□ 1.45
CSPG5-201ENST00000264723 ESPNB1AK53 854 aa24.11■■□□□ 1.45
CSPG5-201ENST00000264723 G3BP1Q13283 466 aaKnown RBP eCLIP24.11■■□□□ 1.45
CSPG5-201ENST00000264723 PPP6R1Q9UPN7 881 aa24.1■■□□□ 1.45
CSPG5-201ENST00000264723 NSD2O96028 1365 aa24.1■■□□□ 1.45
CSPG5-201ENST00000264723 UHRF1BP1LA0JNW5 1464 aa24.1■■□□□ 1.45
CSPG5-201ENST00000264723 HSP90B1P14625 803 aaKnown RBP24.09■■□□□ 1.45
CSPG5-201ENST00000264723 MYL6BP14649 208 aa24.09■■□□□ 1.45
CSPG5-201ENST00000264723 YEATS2Q9ULM3 1422 aa24.09■■□□□ 1.45
CSPG5-201ENST00000264723 GNAT3A8MTJ3 354 aa24.09■■□□□ 1.45
CSPG5-201ENST00000264723 ERC2O15083 957 aa24.09■■□□□ 1.45
CSPG5-201ENST00000264723 TRPM1Q7Z4N2 1603 aa24.09■■□□□ 1.45
CSPG5-201ENST00000264723 TTC21BQ7Z4L5 1316 aa24.08■■□□□ 1.45
CSPG5-201ENST00000264723 ZBTB7BO15156 539 aaPredicted RBP24.08■■□□□ 1.45
CSPG5-201ENST00000264723 DDX54Q8TDD1 881 aaKnown RBP24.08■■□□□ 1.45
CSPG5-201ENST00000264723 NUTM1Q86Y26 1132 aa24.08■■□□□ 1.45
CSPG5-201ENST00000264723 DRC7Q8IY82 874 aa24.08■■□□□ 1.45
CSPG5-201ENST00000264723 VSIG10Q8N0Z9 540 aa24.08■■□□□ 1.44
CSPG5-201ENST00000264723 MPRIPQ6WCQ1 1025 aa24.07■■□□□ 1.44
CSPG5-201ENST00000264723 PPIP5K1Q6PFW1 1433 aa24.07■■□□□ 1.44
CSPG5-201ENST00000264723 SYAP1Q96A49 352 aaPredicted RBP24.06■■□□□ 1.44
CSPG5-201ENST00000264723 ZMYM3Q14202 1370 aa24.06■■□□□ 1.44
CSPG5-201ENST00000264723 IL16Q14005 1332 aa24.06■■□□□ 1.44
CSPG5-201ENST00000264723 FAM13BQ9NYF5 915 aa24.06■■□□□ 1.44
CSPG5-201ENST00000264723 RRAGDQ9NQL2 400 aaPredicted RBP24.06■■□□□ 1.44
CSPG5-201ENST00000264723 RPAP2Q8IXW5 612 aaPredicted RBP24.05■■□□□ 1.44
CSPG5-201ENST00000264723 SIL1Q9H173 461 aa24.05■■□□□ 1.44
CSPG5-201ENST00000264723 YTHDC2Q9H6S0 1430 aaKnown RBP24.05■■□□□ 1.44
CSPG5-201ENST00000264723 ANXA1P04083 346 aa24.05■■□□□ 1.44
CSPG5-201ENST00000264723 CHD1O14646 1710 aa24.05■■□□□ 1.44
CSPG5-201ENST00000264723 VPS37CA5D8V6 355 aaPredicted RBP24.05■■□□□ 1.44
CSPG5-201ENST00000264723 SRCIN1Q9C0H9 1055 aa24.05■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms