RNA–Protein interactions for RNA: ENST00000263121.11

SMARCB1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,690 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-201ENST00000263121 HOXC9P31274 260 aa30.18■■■□□ 2.42
SMARCB1-201ENST00000263121 CDCA7LQ96GN5 454 aa30.17■■■□□ 2.42
SMARCB1-201ENST00000263121 PHF23Q9BUL5 403 aaPredicted RBP30.17■■■□□ 2.42
SMARCB1-201ENST00000263121 NHSL1Q5SYE7 1610 aa30.17■■■□□ 2.42
SMARCB1-201ENST00000263121 GCP02774 474 aa30.17■■■□□ 2.42
SMARCB1-201ENST00000263121 SPATA31A3Q5VYP0 1347 aa30.16■■■□□ 2.42
SMARCB1-201ENST00000263121 SOS2Q07890 1332 aaPredicted RBP30.16■■■□□ 2.42
SMARCB1-201ENST00000263121 MAPK8IP3Q9UPT6 1336 aa30.16■■■□□ 2.42
SMARCB1-201ENST00000263121 CCDC27Q2M243 656 aa30.15■■■□□ 2.42
SMARCB1-201ENST00000263121 HMOX1P09601 288 aa30.14■■■□□ 2.42
SMARCB1-201ENST00000263121 PRKAR2BP31323 418 aa30.14■■■□□ 2.42
SMARCB1-201ENST00000263121 RRP7AQ9Y3A4 280 aaKnown RBP30.14■■■□□ 2.42
SMARCB1-201ENST00000263121 GOLGA2Q08379 1002 aa30.14■■■□□ 2.41
SMARCB1-201ENST00000263121 CRYBG1Q9Y4K1 1723 aa30.13■■■□□ 2.41
SMARCB1-201ENST00000263121 ARHGEF10O15013 1369 aa30.13■■■□□ 2.41
SMARCB1-201ENST00000263121 WWC1Q8IX03 1113 aa30.13■■■□□ 2.41
SMARCB1-201ENST00000263121 IP6K1Q92551 441 aa30.12■■■□□ 2.41
SMARCB1-201ENST00000263121 TMPOP42166 694 aaKnown RBP30.11■■■□□ 2.41
SMARCB1-201ENST00000263121 ARHGEF25Q86VW2 580 aa30.11■■■□□ 2.41
SMARCB1-201ENST00000263121 NEUROD2Q15784 382 aa30.1■■■□□ 2.41
SMARCB1-201ENST00000263121 IGSF1Q8N6C5 1336 aa30.08■■■□□ 2.41
SMARCB1-201ENST00000263121 SLFN5Q08AF3 891 aa30.07■■■□□ 2.41
SMARCB1-201ENST00000263121 SULT6B1Q6IMI4 303 aa30.07■■■□□ 2.4
SMARCB1-201ENST00000263121 AEBP1Q8IUX7 1158 aa30.07■■■□□ 2.4
SMARCB1-201ENST00000263121 TRMT2AQ8IZ69 625 aaKnown RBP30.07■■■□□ 2.4
SMARCB1-201ENST00000263121 SUPT16HQ9Y5B9 1047 aaKnown RBP30.07■■■□□ 2.4
SMARCB1-201ENST00000263121 NEFMP07197 916 aa30.06■■■□□ 2.4
SMARCB1-201ENST00000263121 PHACTR3Q96KR7 559 aa30.06■■■□□ 2.4
SMARCB1-201ENST00000263121 KDRP35968 1356 aa30.05■■■□□ 2.4
SMARCB1-201ENST00000263121 DUSP27Q5VZP5 1158 aa30.05■■■□□ 2.4
SMARCB1-201ENST00000263121 WDR63Q8IWG1 891 aa30.04■■■□□ 2.4
SMARCB1-201ENST00000263121 EYA1Q99502 592 aa30.04■■■□□ 2.4
SMARCB1-201ENST00000263121 ROBO1Q9Y6N7 1651 aa30.04■■■□□ 2.4
SMARCB1-201ENST00000263121 SPINK5Q9NQ38 1064 aaPredicted RBP30.04■■■□□ 2.4
SMARCB1-201ENST00000263121 E9PSI1 815 aa30.03■■■□□ 2.4
SMARCB1-201ENST00000263121 PLEKHG5O94827 1062 aa30.03■■■□□ 2.4
SMARCB1-201ENST00000263121 TRIM35Q9UPQ4 493 aa30.03■■■□□ 2.4
SMARCB1-201ENST00000263121 NFE2L2Q16236 605 aa30.02■■■□□ 2.4
SMARCB1-201ENST00000263121 RIPK4P57078 832 aa30.01■■■□□ 2.39
SMARCB1-201ENST00000263121 AHDC1Q5TGY3 1603 aaPredicted RBP29.99■■■□□ 2.39
SMARCB1-201ENST00000263121 ZBTB7CA1YPR0 619 aa29.99■■■□□ 2.39
SMARCB1-201ENST00000263121 AEBP2Q6ZN18 517 aaPredicted RBP29.99■■■□□ 2.39
SMARCB1-201ENST00000263121 CABLES1Q8TDN4 633 aa29.98■■■□□ 2.39
SMARCB1-201ENST00000263121 ABCC6O95255 1503 aa29.98■■■□□ 2.39
SMARCB1-201ENST00000263121 LTV1Q96GA3 475 aaPredicted RBP29.98■■■□□ 2.39
SMARCB1-201ENST00000263121 COL18A1P39060 1754 aa29.97■■■□□ 2.39
SMARCB1-201ENST00000263121 ABCA3Q99758 1704 aa29.97■■■□□ 2.39
SMARCB1-201ENST00000263121 CPDO75976 1380 aa29.96■■■□□ 2.39
SMARCB1-201ENST00000263121 ZC3H6P61129 1189 aaKnown RBP29.96■■■□□ 2.39
SMARCB1-201ENST00000263121 RNF123Q5XPI4 1314 aa29.96■■■□□ 2.39
SMARCB1-201ENST00000263121 DLG5Q8TDM6 1919 aa29.96■■■□□ 2.39
SMARCB1-201ENST00000263121 NEFLP07196 543 aa29.94■■■□□ 2.38
SMARCB1-201ENST00000263121 RCAN3Q9UKA8 241 aa29.94■■■□□ 2.38
SMARCB1-201ENST00000263121 RGPD5Q99666 1765 aa29.94■■■□□ 2.38
SMARCB1-201ENST00000263121 CAMTA1Q9Y6Y1 1673 aa29.93■■■□□ 2.38
SMARCB1-201ENST00000263121 AXIN2Q9Y2T1 843 aa29.93■■■□□ 2.38
SMARCB1-201ENST00000263121 IL16Q14005 1332 aa29.92■■■□□ 2.38
SMARCB1-201ENST00000263121 RGPD2P0DJD1 1756 aa29.92■■■□□ 2.38
SMARCB1-201ENST00000263121 NCAPD2Q15021 1401 aa29.92■■■□□ 2.38
SMARCB1-201ENST00000263121 NBPF6Q5VWK0 638 aa29.9■■■□□ 2.38
SMARCB1-201ENST00000263121 ANKRD24Q8TF21 1146 aa29.9■■■□□ 2.38
SMARCB1-201ENST00000263121 NBPF4Q96M43 638 aa29.9■■■□□ 2.38
SMARCB1-201ENST00000263121 KIAA0232Q92628 1395 aa29.89■■■□□ 2.38
SMARCB1-201ENST00000263121 LMOD3Q0VAK6 560 aa29.88■■■□□ 2.37
SMARCB1-201ENST00000263121 FKBP8Q14318 412 aa29.88■■■□□ 2.37
SMARCB1-201ENST00000263121 LMO7Q8WWI1 1683 aa29.87■■■□□ 2.37
SMARCB1-201ENST00000263121 ERBB3P21860 1342 aa29.87■■■□□ 2.37
SMARCB1-201ENST00000263121 MYH16Q9H6N6 1097 aa29.87■■■□□ 2.37
SMARCB1-201ENST00000263121 USHBP1Q8N6Y0 703 aa29.85■■■□□ 2.37
SMARCB1-201ENST00000263121 LRRC59Q96AG4 307 aaKnown RBP29.85■■■□□ 2.37
SMARCB1-201ENST00000263121 TOM1O60784 492 aa29.85■■■□□ 2.37
SMARCB1-201ENST00000263121 COL22A1Q8NFW1 1626 aaPredicted RBP29.83■■■□□ 2.37
SMARCB1-201ENST00000263121 MTHFSDQ2M296 383 aaKnown RBP29.83■■■□□ 2.37
SMARCB1-201ENST00000263121 FAM208AQ9UK61 1670 aaKnown RBP29.83■■■□□ 2.37
SMARCB1-201ENST00000263121 CALD1Q05682 793 aaKnown RBP29.82■■■□□ 2.36
SMARCB1-201ENST00000263121 CHRNA2Q15822 529 aa29.82■■■□□ 2.36
SMARCB1-201ENST00000263121 COL16A1Q07092 1604 aaPredicted RBP29.81■■■□□ 2.36
SMARCB1-201ENST00000263121 GAS2L2Q8NHY3 880 aa29.81■■■□□ 2.36
SMARCB1-201ENST00000263121 PHLPP1O60346 1717 aa29.81■■■□□ 2.36
SMARCB1-201ENST00000263121 FANCIQ9NVI1 1328 aa29.8■■■□□ 2.36
SMARCB1-201ENST00000263121 RRP1P56182 461 aaKnown RBP29.79■■■□□ 2.36
SMARCB1-201ENST00000263121 THUMPD2Q9BTF0 503 aaKnown RBP29.79■■■□□ 2.36
SMARCB1-201ENST00000263121 FAM83GA6ND36 823 aa29.78■■■□□ 2.36
SMARCB1-201ENST00000263121 HAP1P54257 671 aaPredicted RBP29.78■■■□□ 2.36
SMARCB1-201ENST00000263121 PRDM11Q9NQV5 511 aa29.78■■■□□ 2.36
SMARCB1-201ENST00000263121 IRX6P78412 446 aaPredicted RBP29.77■■■□□ 2.36
SMARCB1-201ENST00000263121 TSR2Q969E8 191 aaKnown RBP29.76■■■□□ 2.36
SMARCB1-201ENST00000263121 IFT57Q9NWB7 429 aa29.76■■■□□ 2.35
SMARCB1-201ENST00000263121 ZNF853P0CG23 659 aa29.75■■■□□ 2.35
SMARCB1-201ENST00000263121 DCTN1Q14203 1278 aa29.74■■■□□ 2.35
SMARCB1-201ENST00000263121 UBAP1LF5GYI3 381 aa29.72■■■□□ 2.35
SMARCB1-201ENST00000263121 HTATSF1O43719 755 aaKnown RBP29.72■■■□□ 2.35
SMARCB1-201ENST00000263121 GNAI1P63096 354 aa29.72■■■□□ 2.35
SMARCB1-201ENST00000263121 PIP4K2BP78356 416 aa29.72■■■□□ 2.35
SMARCB1-201ENST00000263121 ERICH6BQ5W0A0 696 aa29.72■■■□□ 2.35
SMARCB1-201ENST00000263121 LRRC37A3O60309 1634 aa29.71■■■□□ 2.35
SMARCB1-201ENST00000263121 COL5A2P05997 1499 aaPredicted RBP29.71■■■□□ 2.35
SMARCB1-201ENST00000263121 CT47B1P0C2W7 299 aaPredicted RBP29.7■■■□□ 2.35
SMARCB1-201ENST00000263121 MCM10Q7L590 875 aa29.7■■■□□ 2.35
SMARCB1-201ENST00000263121 CFAP44Q96MT7 982 aa29.7■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms