RNA–Protein interactions for RNA: ENST00000262580.8

GSDMD-201, Transcript of gasdermin D, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GSDMD, Length 1,762 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSDMD-201ENST00000262580 MAPK8IP3Q9UPT6 1336 aa24.26■■□□□ 1.47
GSDMD-201ENST00000262580 HOXC9P31274 260 aa24.25■■□□□ 1.47
GSDMD-201ENST00000262580 PRKAR2BP31323 418 aa24.25■■□□□ 1.47
GSDMD-201ENST00000262580 SUPT16HQ9Y5B9 1047 aaKnown RBP24.25■■□□□ 1.47
GSDMD-201ENST00000262580 RTL1A6NKG5 1358 aa24.24■■□□□ 1.47
GSDMD-201ENST00000262580 PLEKHG5O94827 1062 aa24.24■■□□□ 1.47
GSDMD-201ENST00000262580 KCNH5Q8NCM2 988 aa24.24■■□□□ 1.47
GSDMD-201ENST00000262580 NHSL1Q5SYE7 1610 aa24.23■■□□□ 1.47
GSDMD-201ENST00000262580 GOLGA2Q08379 1002 aa24.23■■□□□ 1.47
GSDMD-201ENST00000262580 WWC1Q8IX03 1113 aa24.23■■□□□ 1.47
GSDMD-201ENST00000262580 PHF23Q9BUL5 403 aaPredicted RBP24.23■■□□□ 1.47
GSDMD-201ENST00000262580 PNNQ9H307 717 aaKnown RBP24.23■■□□□ 1.47
GSDMD-201ENST00000262580 CRYBG1Q9Y4K1 1723 aa24.23■■□□□ 1.47
GSDMD-201ENST00000262580 GCP02774 474 aa24.21■■□□□ 1.47
GSDMD-201ENST00000262580 TMPOP42166 694 aaKnown RBP24.2■■□□□ 1.46
GSDMD-201ENST00000262580 AEBP1Q8IUX7 1158 aa24.2■■□□□ 1.46
GSDMD-201ENST00000262580 SPATA31A3Q5VYP0 1347 aa24.2■■□□□ 1.46
GSDMD-201ENST00000262580 ARHGEF10O15013 1369 aa24.2■■□□□ 1.46
GSDMD-201ENST00000262580 CCDC27Q2M243 656 aa24.19■■□□□ 1.46
GSDMD-201ENST00000262580 SPINK5Q9NQ38 1064 aaPredicted RBP24.19■■□□□ 1.46
GSDMD-201ENST00000262580 NCBP3Q53F19 620 aaKnown RBP24.19■■□□□ 1.46
GSDMD-201ENST00000262580 ZBTB7CA1YPR0 619 aa24.18■■□□□ 1.46
GSDMD-201ENST00000262580 SOS2Q07890 1332 aaPredicted RBP24.18■■□□□ 1.46
GSDMD-201ENST00000262580 SLFN5Q08AF3 891 aa24.18■■□□□ 1.46
GSDMD-201ENST00000262580 SULT6B1Q6IMI4 303 aa24.18■■□□□ 1.46
GSDMD-201ENST00000262580 PHACTR3Q96KR7 559 aa24.18■■□□□ 1.46
GSDMD-201ENST00000262580 DUSP27Q5VZP5 1158 aa24.17■■□□□ 1.46
GSDMD-201ENST00000262580 IP6K1Q92551 441 aa24.17■■□□□ 1.46
GSDMD-201ENST00000262580 ARHGEF25Q86VW2 580 aa24.16■■□□□ 1.46
GSDMD-201ENST00000262580 ROBO1Q9Y6N7 1651 aa24.15■■□□□ 1.46
GSDMD-201ENST00000262580 IGSF1Q8N6C5 1336 aa24.15■■□□□ 1.46
GSDMD-201ENST00000262580 NEFMP07197 916 aa24.15■■□□□ 1.46
GSDMD-201ENST00000262580 TRMT2AQ8IZ69 625 aaKnown RBP24.14■■□□□ 1.46
GSDMD-201ENST00000262580 LTV1Q96GA3 475 aaPredicted RBP24.14■■□□□ 1.46
GSDMD-201ENST00000262580 EYA1Q99502 592 aa24.14■■□□□ 1.46
GSDMD-201ENST00000262580 TRIM35Q9UPQ4 493 aa24.14■■□□□ 1.46
GSDMD-201ENST00000262580 DLG5Q8TDM6 1919 aa24.14■■□□□ 1.45
GSDMD-201ENST00000262580 E9PSI1 815 aa24.14■■□□□ 1.45
GSDMD-201ENST00000262580 RIPK4P57078 832 aa24.14■■□□□ 1.45
GSDMD-201ENST00000262580 KDRP35968 1356 aa24.13■■□□□ 1.45
GSDMD-201ENST00000262580 NEFLP07196 543 aa24.12■■□□□ 1.45
GSDMD-201ENST00000262580 NFE2L2Q16236 605 aa24.12■■□□□ 1.45
GSDMD-201ENST00000262580 WDR63Q8IWG1 891 aa24.12■■□□□ 1.45
GSDMD-201ENST00000262580 CABLES1Q8TDN4 633 aa24.12■■□□□ 1.45
GSDMD-201ENST00000262580 RGPD2P0DJD1 1756 aa24.12■■□□□ 1.45
GSDMD-201ENST00000262580 FKBP8Q14318 412 aa24.11■■□□□ 1.45
GSDMD-201ENST00000262580 RGPD5Q99666 1765 aa24.11■■□□□ 1.45
GSDMD-201ENST00000262580 ABCA3Q99758 1704 aa24.1■■□□□ 1.45
GSDMD-201ENST00000262580 ZC3H6P61129 1189 aaKnown RBP24.1■■□□□ 1.45
GSDMD-201ENST00000262580 RCAN3Q9UKA8 241 aa24.09■■□□□ 1.45
GSDMD-201ENST00000262580 COL18A1P39060 1754 aa24.08■■□□□ 1.45
GSDMD-201ENST00000262580 RNF123Q5XPI4 1314 aa24.07■■□□□ 1.44
GSDMD-201ENST00000262580 IRX6P78412 446 aaPredicted RBP24.07■■□□□ 1.44
GSDMD-201ENST00000262580 AHDC1Q5TGY3 1603 aaPredicted RBP24.07■■□□□ 1.44
GSDMD-201ENST00000262580 AXIN2Q9Y2T1 843 aa24.06■■□□□ 1.44
GSDMD-201ENST00000262580 USHBP1Q8N6Y0 703 aa24.05■■□□□ 1.44
GSDMD-201ENST00000262580 CAMTA1Q9Y6Y1 1673 aa24.05■■□□□ 1.44
GSDMD-201ENST00000262580 AEBP2Q6ZN18 517 aaPredicted RBP24.04■■□□□ 1.44
GSDMD-201ENST00000262580 ABCC6O95255 1503 aa24.03■■□□□ 1.44
GSDMD-201ENST00000262580 NBPF6Q5VWK0 638 aa24.03■■□□□ 1.44
GSDMD-201ENST00000262580 ANKRD24Q8TF21 1146 aa24.03■■□□□ 1.44
GSDMD-201ENST00000262580 LRRC59Q96AG4 307 aaKnown RBP24.03■■□□□ 1.44
GSDMD-201ENST00000262580 NBPF4Q96M43 638 aa24.03■■□□□ 1.44
GSDMD-201ENST00000262580 KIAA0232Q92628 1395 aa24.03■■□□□ 1.44
GSDMD-201ENST00000262580 CPDO75976 1380 aa24.02■■□□□ 1.44
GSDMD-201ENST00000262580 THUMPD2Q9BTF0 503 aaKnown RBP24.01■■□□□ 1.43
GSDMD-201ENST00000262580 IL16Q14005 1332 aa24.01■■□□□ 1.43
GSDMD-201ENST00000262580 NCAPD2Q15021 1401 aa24■■□□□ 1.43
GSDMD-201ENST00000262580 LMO7Q8WWI1 1683 aa24■■□□□ 1.43
GSDMD-201ENST00000262580 MYH16Q9H6N6 1097 aa24■■□□□ 1.43
GSDMD-201ENST00000262580 ERBB3P21860 1342 aa23.99■■□□□ 1.43
GSDMD-201ENST00000262580 CHRNA2Q15822 529 aa23.99■■□□□ 1.43
GSDMD-201ENST00000262580 FANCIQ9NVI1 1328 aa23.98■■□□□ 1.43
GSDMD-201ENST00000262580 FAM83GA6ND36 823 aa23.98■■□□□ 1.43
GSDMD-201ENST00000262580 RRP1P56182 461 aaKnown RBP23.98■■□□□ 1.43
GSDMD-201ENST00000262580 LMOD3Q0VAK6 560 aa23.98■■□□□ 1.43
GSDMD-201ENST00000262580 MTHFSDQ2M296 383 aaKnown RBP23.98■■□□□ 1.43
GSDMD-201ENST00000262580 TSR2Q969E8 191 aaKnown RBP23.98■■□□□ 1.43
GSDMD-201ENST00000262580 PHLPP1O60346 1717 aa23.96■■□□□ 1.43
GSDMD-201ENST00000262580 FAM208AQ9UK61 1670 aaKnown RBP23.96■■□□□ 1.43
GSDMD-201ENST00000262580 DCTN1Q14203 1278 aa23.96■■□□□ 1.43
GSDMD-201ENST00000262580 COL16A1Q07092 1604 aaPredicted RBP23.94■■□□□ 1.42
GSDMD-201ENST00000262580 COL22A1Q8NFW1 1626 aaPredicted RBP23.94■■□□□ 1.42
GSDMD-201ENST00000262580 HAP1P54257 671 aaPredicted RBP23.94■■□□□ 1.42
GSDMD-201ENST00000262580 GAS2L2Q8NHY3 880 aa23.94■■□□□ 1.42
GSDMD-201ENST00000262580 CALD1Q05682 793 aaKnown RBP23.92■■□□□ 1.42
GSDMD-201ENST00000262580 PRDM11Q9NQV5 511 aa23.92■■□□□ 1.42
GSDMD-201ENST00000262580 TOM1O60784 492 aa23.91■■□□□ 1.42
GSDMD-201ENST00000262580 MCM10Q7L590 875 aa23.91■■□□□ 1.42
GSDMD-201ENST00000262580 LAS1LQ9Y4W2 734 aaKnown RBP23.91■■□□□ 1.42
GSDMD-201ENST00000262580 LRRC37A3O60309 1634 aa23.9■■□□□ 1.42
GSDMD-201ENST00000262580 PIP4K2BP78356 416 aa23.9■■□□□ 1.42
GSDMD-201ENST00000262580 IFT57Q9NWB7 429 aa23.9■■□□□ 1.42
GSDMD-201ENST00000262580 PLIN1O60240 522 aa23.89■■□□□ 1.42
GSDMD-201ENST00000262580 EXOSC9Q06265 439 aaKnown RBP23.89■■□□□ 1.42
GSDMD-201ENST00000262580 ZNF853P0CG23 659 aa23.88■■□□□ 1.41
GSDMD-201ENST00000262580 CSB-PGBD3P0DP91 1061 aa23.88■■□□□ 1.41
GSDMD-201ENST00000262580 GNAI1P63096 354 aa23.88■■□□□ 1.41
GSDMD-201ENST00000262580 MAP3K5Q99683 1374 aa23.87■■□□□ 1.41
GSDMD-201ENST00000262580 NLRP2Q9NX02 1062 aa23.87■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms