RNA–Protein interactions for RNA: ENST00000261674.8

SFSWAP-201, Transcript of splicing factor SWAP, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,246 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-201ENST00000261674 PRKAR2BP31323 418 aa18.17■□□□□ 0.5
SFSWAP-201ENST00000261674 ESCO1Q5FWF5 840 aa18.17■□□□□ 0.5
SFSWAP-201ENST00000261674 GOLGA6L3A6NEY3 463 aa18.17■□□□□ 0.5
SFSWAP-201ENST00000261674 CHMP5Q9NZZ3 219 aa18.16■□□□□ 0.5
SFSWAP-201ENST00000261674 MYO3AQ8NEV4 1616 aa18.16■□□□□ 0.5
SFSWAP-201ENST00000261674 L1TD1Q5T7N2 865 aaKnown RBP18.16■□□□□ 0.5
SFSWAP-201ENST00000261674 PLEKHF1Q96S99 279 aa18.16■□□□□ 0.5
SFSWAP-201ENST00000261674 PANK2Q9BZ23 570 aa18.16■□□□□ 0.5
SFSWAP-201ENST00000261674 ADAMTSL3P82987 1691 aa18.16■□□□□ 0.5
SFSWAP-201ENST00000261674 CCDC61Q9Y6R9 512 aa18.15■□□□□ 0.5
SFSWAP-201ENST00000261674 TULP4Q9NRJ4 1543 aa18.15■□□□□ 0.5
SFSWAP-201ENST00000261674 HSP90AB1P08238 724 aaKnown RBP18.15■□□□□ 0.5
SFSWAP-201ENST00000261674 TRAK2O60296 914 aa18.15■□□□□ 0.5
SFSWAP-201ENST00000261674 ORAI2Q96SN7 254 aa18.14■□□□□ 0.49
SFSWAP-201ENST00000261674 QRICH2Q9H0J4 1663 aa18.14■□□□□ 0.49
SFSWAP-201ENST00000261674 FOXO3O43524 673 aa18.13■□□□□ 0.49
SFSWAP-201ENST00000261674 RRS1Q15050 365 aaKnown RBP18.13■□□□□ 0.49
SFSWAP-201ENST00000261674 ZBTB40Q9NUA8 1239 aa18.13■□□□□ 0.49
SFSWAP-201ENST00000261674 ACEP12821 1306 aa18.13■□□□□ 0.49
SFSWAP-201ENST00000261674 HDAC1Q13547 482 aaPredicted RBP18.13■□□□□ 0.49
SFSWAP-201ENST00000261674 ZNF335Q9H4Z2 1342 aaPredicted RBP18.12■□□□□ 0.49
SFSWAP-201ENST00000261674 APBB1O00213 710 aa18.12■□□□□ 0.49
SFSWAP-201ENST00000261674 XRCC6P12956 609 aaKnown RBP eCLIP18.12■□□□□ 0.49
SFSWAP-201ENST00000261674 FAM43AQ8N2R8 423 aa18.12■□□□□ 0.49
SFSWAP-201ENST00000261674 NRXN3Q9Y4C0 1643 aa18.12■□□□□ 0.49
SFSWAP-201ENST00000261674 NEURL4Q96JN8 1562 aa18.12■□□□□ 0.49
SFSWAP-201ENST00000261674 KIAA1210Q9ULL0 1709 aa18.11■□□□□ 0.49
SFSWAP-201ENST00000261674 IQSEC2Q5JU85 1478 aa18.11■□□□□ 0.49
SFSWAP-201ENST00000261674 NPHP4O75161 1426 aaPredicted RBP18.11■□□□□ 0.49
SFSWAP-201ENST00000261674 PPIP5K1Q6PFW1 1433 aa18.11■□□□□ 0.49
SFSWAP-201ENST00000261674 CT47B1P0C2W7 299 aaPredicted RBP18.11■□□□□ 0.49
SFSWAP-201ENST00000261674 CHD1LQ86WJ1 897 aa18.11■□□□□ 0.49
SFSWAP-201ENST00000261674 SMC5Q8IY18 1101 aa18.11■□□□□ 0.49
SFSWAP-201ENST00000261674 TSPYL6Q8N831 410 aa18.11■□□□□ 0.49
SFSWAP-201ENST00000261674 PHACTR3Q96KR7 559 aa18.11■□□□□ 0.49
SFSWAP-201ENST00000261674 KIF16BQ96L93 1317 aa18.11■□□□□ 0.49
SFSWAP-201ENST00000261674 SETBP1Q9Y6X0 1596 aa18.11■□□□□ 0.49
SFSWAP-201ENST00000261674 RRAGDQ9NQL2 400 aaPredicted RBP18.1■□□□□ 0.49
SFSWAP-201ENST00000261674 ARHGEF28Q8N1W1 1705 aaKnown RBP18.09■□□□□ 0.49
SFSWAP-201ENST00000261674 SETD1BQ9UPS6 1966 aaKnown RBP18.09■□□□□ 0.49
SFSWAP-201ENST00000261674 PRKCSHP14314 528 aaPredicted RBP18.09■□□□□ 0.49
SFSWAP-201ENST00000261674 RBM42Q9BTD8 480 aaKnown RBP18.09■□□□□ 0.49
SFSWAP-201ENST00000261674 SHPRHQ149N8 1683 aa18.09■□□□□ 0.49
SFSWAP-201ENST00000261674 PNNQ9H307 717 aaKnown RBP18.08■□□□□ 0.48
SFSWAP-201ENST00000261674 EMILIN1Q9Y6C2 1016 aa18.08■□□□□ 0.48
SFSWAP-201ENST00000261674 NUCB1Q02818 461 aa18.07■□□□□ 0.48
SFSWAP-201ENST00000261674 DCTN1Q14203 1278 aa18.07■□□□□ 0.48
SFSWAP-201ENST00000261674 ARHGAP23Q9P227 1491 aa18.07■□□□□ 0.48
SFSWAP-201ENST00000261674 NSD2O96028 1365 aa18.07■□□□□ 0.48
SFSWAP-201ENST00000261674 ATAD2Q6PL18 1390 aa18.06■□□□□ 0.48
SFSWAP-201ENST00000261674 FAM83GA6ND36 823 aa18.05■□□□□ 0.48
SFSWAP-201ENST00000261674 FCHSD2O94868 740 aa18.05■□□□□ 0.48
SFSWAP-201ENST00000261674 PSME1Q06323 249 aa18.05■□□□□ 0.48
SFSWAP-201ENST00000261674 LTV1Q96GA3 475 aaPredicted RBP18.05■□□□□ 0.48
SFSWAP-201ENST00000261674 SLIT1O75093 1534 aa18.05■□□□□ 0.48
SFSWAP-201ENST00000261674 POLKQ9UBT6 870 aa18.04■□□□□ 0.48
SFSWAP-201ENST00000261674 NAP1L5Q96NT1 182 aaPredicted RBP18.04■□□□□ 0.48
SFSWAP-201ENST00000261674 NLRP6P59044 892 aa18.03■□□□□ 0.48
SFSWAP-201ENST00000261674 TNPO1Q92973 898 aaKnown RBP18.02■□□□□ 0.48
SFSWAP-201ENST00000261674 PUS7Q96PZ0 661 aaKnown RBP18.02■□□□□ 0.48
SFSWAP-201ENST00000261674 VAMP4O75379 141 aa18.02■□□□□ 0.48
SFSWAP-201ENST00000261674 ABTB2Q8N961 1025 aa18.02■□□□□ 0.48
SFSWAP-201ENST00000261674 CD2BP2O95400 341 aaKnown RBP18.02■□□□□ 0.47
SFSWAP-201ENST00000261674 ATF3P18847 181 aa18.02■□□□□ 0.47
SFSWAP-201ENST00000261674 ZBTB7BO15156 539 aaPredicted RBP18.01■□□□□ 0.47
SFSWAP-201ENST00000261674 TWISTNBQ3B726 338 aaPredicted RBP18.01■□□□□ 0.47
SFSWAP-201ENST00000261674 IL16Q14005 1332 aa18.01■□□□□ 0.47
SFSWAP-201ENST00000261674 COG3Q96JB2 828 aa18.01■□□□□ 0.47
SFSWAP-201ENST00000261674 RSPH6AQ9H0K4 717 aa18.01■□□□□ 0.47
SFSWAP-201ENST00000261674 TBC1D9Q6ZT07 1266 aa18■□□□□ 0.47
SFSWAP-201ENST00000261674 TMEM94Q12767 1356 aa18■□□□□ 0.47
SFSWAP-201ENST00000261674 NFE2L2Q16236 605 aa18■□□□□ 0.47
SFSWAP-201ENST00000261674 ALDH1L2Q3SY69 923 aa18■□□□□ 0.47
SFSWAP-201ENST00000261674 C8orf58Q8NAV2 365 aa18■□□□□ 0.47
SFSWAP-201ENST00000261674 MBIPQ9NS73 344 aa18■□□□□ 0.47
SFSWAP-201ENST00000261674 DDX11L8A8MPP1 907 aa18■□□□□ 0.47
SFSWAP-201ENST00000261674 PHF8Q9UPP1 1060 aa18■□□□□ 0.47
SFSWAP-201ENST00000261674 NCLP19338 710 aaKnown RBP17.99■□□□□ 0.47
SFSWAP-201ENST00000261674 MED14O60244 1454 aa17.98■□□□□ 0.47
SFSWAP-201ENST00000261674 GNAI1P63096 354 aa17.98■□□□□ 0.47
SFSWAP-201ENST00000261674 KRT24Q2M2I5 525 aa17.98■□□□□ 0.47
SFSWAP-201ENST00000261674 C16orf71Q8IYS4 520 aaPredicted RBP17.98■□□□□ 0.47
SFSWAP-201ENST00000261674 MRPL50Q8N5N7 158 aaKnown RBP17.98■□□□□ 0.47
SFSWAP-201ENST00000261674 CABLES1Q8TDN4 633 aa17.98■□□□□ 0.47
SFSWAP-201ENST00000261674 BMP2KLQ5H9B9 411 aa17.98■□□□□ 0.47
SFSWAP-201ENST00000261674 GBP4Q96PP9 640 aa17.98■□□□□ 0.47
SFSWAP-201ENST00000261674 GRPEL1Q9HAV7 217 aa17.97■□□□□ 0.47
SFSWAP-201ENST00000261674 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.97■□□□□ 0.47
SFSWAP-201ENST00000261674 SIRT2Q8IXJ6 389 aa17.97■□□□□ 0.47
SFSWAP-201ENST00000261674 TTC21BQ7Z4L5 1316 aa17.97■□□□□ 0.47
SFSWAP-201ENST00000261674 VIRMAQ69YN4 1812 aaKnown RBP17.97■□□□□ 0.47
SFSWAP-201ENST00000261674 RBM25P49756 843 aaKnown RBP17.96■□□□□ 0.47
SFSWAP-201ENST00000261674 MRE11P49959 708 aa17.96■□□□□ 0.47
SFSWAP-201ENST00000261674 NCBP3Q53F19 620 aaKnown RBP17.96■□□□□ 0.47
SFSWAP-201ENST00000261674 AEBP2Q6ZN18 517 aaPredicted RBP17.96■□□□□ 0.47
SFSWAP-201ENST00000261674 GCC1Q96CN9 775 aa17.96■□□□□ 0.47
SFSWAP-201ENST00000261674 FAM135BQ49AJ0 1406 aa17.96■□□□□ 0.47
SFSWAP-201ENST00000261674 TRIM44Q96DX7 344 aaPredicted RBP17.96■□□□□ 0.47
SFSWAP-201ENST00000261674 CD163L1Q9NR16 1453 aa17.96■□□□□ 0.46
SFSWAP-201ENST00000261674 SETD1AO15047 1707 aaKnown RBP17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms