RNA–Protein interactions for RNA: ENST00000260327.8

CTDSPL2-201, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 6,828 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-201ENST00000260327 GNAI3P08754 354 aa11.57□□□□□ -0.56
CTDSPL2-201ENST00000260327 TMCO3Q6UWJ1 677 aa11.57□□□□□ -0.56
CTDSPL2-201ENST00000260327 CLASRPQ8N2M8 674 aaKnown RBP11.57□□□□□ -0.56
CTDSPL2-201ENST00000260327 IPO4Q8TEX9 1081 aaKnown RBP11.57□□□□□ -0.56
CTDSPL2-201ENST00000260327 GNAI2P04899 355 aa11.57□□□□□ -0.56
CTDSPL2-201ENST00000260327 CLCN1P35523 988 aa11.57□□□□□ -0.56
CTDSPL2-201ENST00000260327 USP25Q9UHP3 1055 aa11.57□□□□□ -0.56
CTDSPL2-201ENST00000260327 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.57□□□□□ -0.56
CTDSPL2-201ENST00000260327 RARSP54136 660 aaKnown RBP11.57□□□□□ -0.56
CTDSPL2-201ENST00000260327 IGHDP01880 384 aa11.57□□□□□ -0.56
CTDSPL2-201ENST00000260327 PSMA5P28066 241 aa11.57□□□□□ -0.56
CTDSPL2-201ENST00000260327 STK11IPQ8N1F8 1099 aa11.57□□□□□ -0.56
CTDSPL2-201ENST00000260327 ERLIN1O75477 346 aa11.56□□□□□ -0.56
CTDSPL2-201ENST00000260327 PRAM1Q96QH2 718 aa11.56□□□□□ -0.56
CTDSPL2-201ENST00000260327 TRIM34Q9BYJ4 488 aa11.56□□□□□ -0.56
CTDSPL2-201ENST00000260327 XRCC6P12956 609 aaKnown RBP eCLIP11.56□□□□□ -0.56
CTDSPL2-201ENST00000260327 RIC3Q7Z5B4 369 aa11.56□□□□□ -0.56
CTDSPL2-201ENST00000260327 C16orf45Q96MC5 204 aaPredicted RBP11.56□□□□□ -0.56
CTDSPL2-201ENST00000260327 DUSP27Q5VZP5 1158 aa11.56□□□□□ -0.56
CTDSPL2-201ENST00000260327 GIMAP7Q8NHV1 300 aa11.56□□□□□ -0.56
CTDSPL2-201ENST00000260327 SAFBQ15424 915 aaKnown RBP eCLIP11.56□□□□□ -0.56
CTDSPL2-201ENST00000260327 NUP62CLQ9H1M0 184 aa11.56□□□□□ -0.56
CTDSPL2-201ENST00000260327 CDK13Q14004 1512 aaKnown RBP11.55□□□□□ -0.56
CTDSPL2-201ENST00000260327 LRRFIP1Q32MZ4 808 aaKnown RBP11.55□□□□□ -0.56
CTDSPL2-201ENST00000260327 USP8P40818 1118 aa11.55□□□□□ -0.56
CTDSPL2-201ENST00000260327 STK38Q15208 465 aa11.55□□□□□ -0.56
CTDSPL2-201ENST00000260327 CCDC30Q5VVM6 783 aa11.55□□□□□ -0.56
CTDSPL2-201ENST00000260327 SMARCE1Q969G3 411 aa11.55□□□□□ -0.56
CTDSPL2-201ENST00000260327 PTPN14Q15678 1187 aa11.55□□□□□ -0.56
CTDSPL2-201ENST00000260327 WASHC4Q2M389 1173 aa11.55□□□□□ -0.56
CTDSPL2-201ENST00000260327 LRRCC1Q9C099 1032 aa11.55□□□□□ -0.56
CTDSPL2-201ENST00000260327 SCAPERQ9BY12 1400 aa11.55□□□□□ -0.56
CTDSPL2-201ENST00000260327 DYNC1I1O14576 645 aa11.55□□□□□ -0.56
CTDSPL2-201ENST00000260327 PDCP20941 246 aa11.55□□□□□ -0.56
CTDSPL2-201ENST00000260327 ME1P48163 572 aa11.55□□□□□ -0.56
CTDSPL2-201ENST00000260327 KRT85P78386 507 aa11.55□□□□□ -0.56
CTDSPL2-201ENST00000260327 THUMPD2Q9BTF0 503 aaKnown RBP11.55□□□□□ -0.56
CTDSPL2-201ENST00000260327 CABP1Q9NZU7 370 aa11.55□□□□□ -0.56
CTDSPL2-201ENST00000260327 GTF2E1P29083 439 aaPredicted RBP11.54□□□□□ -0.56
CTDSPL2-201ENST00000260327 SULT6B1Q6IMI4 303 aa11.54□□□□□ -0.56
CTDSPL2-201ENST00000260327 IGSF3O75054 1194 aa11.54□□□□□ -0.56
CTDSPL2-201ENST00000260327 DNAJC2Q99543 621 aaKnown RBP11.54□□□□□ -0.56
CTDSPL2-201ENST00000260327 RBM27Q9P2N5 1060 aaKnown RBP11.54□□□□□ -0.56
CTDSPL2-201ENST00000260327 NCAPD3P42695 1498 aa11.54□□□□□ -0.56
CTDSPL2-201ENST00000260327 NKTRP30414 1462 aaKnown RBP11.54□□□□□ -0.56
CTDSPL2-201ENST00000260327 TNNT1P13805 278 aa11.54□□□□□ -0.56
CTDSPL2-201ENST00000260327 TMPOP42166 694 aaKnown RBP11.54□□□□□ -0.56
CTDSPL2-201ENST00000260327 LARP1BQ659C4 914 aaKnown RBP11.54□□□□□ -0.56
CTDSPL2-201ENST00000260327 SSH1Q8WYL5 1049 aa11.54□□□□□ -0.56
CTDSPL2-201ENST00000260327 TRMT1Q9NXH9 659 aaKnown RBP11.54□□□□□ -0.56
CTDSPL2-201ENST00000260327 FILIP1LQ4L180 1135 aa11.53□□□□□ -0.56
CTDSPL2-201ENST00000260327 RALYLQ86SE5 291 aaKnown RBP11.53□□□□□ -0.56
CTDSPL2-201ENST00000260327 SPATA32Q96LK8 384 aa11.53□□□□□ -0.56
CTDSPL2-201ENST00000260327 SMARCA5O60264 1052 aaPredicted RBP11.53□□□□□ -0.56
CTDSPL2-201ENST00000260327 OFD1O75665 1012 aa11.53□□□□□ -0.56
CTDSPL2-201ENST00000260327 ZNF830Q96NB3 372 aaPredicted RBP11.53□□□□□ -0.56
CTDSPL2-201ENST00000260327 PLCD3Q8N3E9 789 aa11.53□□□□□ -0.56
CTDSPL2-201ENST00000260327 TMX1Q9H3N1 280 aa11.53□□□□□ -0.56
CTDSPL2-201ENST00000260327 RAD21O60216 631 aa11.53□□□□□ -0.56
CTDSPL2-201ENST00000260327 IL1RAPL2Q9NP60 686 aa11.53□□□□□ -0.56
CTDSPL2-201ENST00000260327 PTPN23Q9H3S7 1636 aa11.52□□□□□ -0.56
CTDSPL2-201ENST00000260327 ZNF396Q96N95 335 aaPredicted RBP11.52□□□□□ -0.56
CTDSPL2-201ENST00000260327 NOL10Q9BSC4 688 aaKnown RBP11.52□□□□□ -0.56
CTDSPL2-201ENST00000260327 NSD3Q9BZ95 1437 aa11.52□□□□□ -0.57
CTDSPL2-201ENST00000260327 HSP90AB2PQ58FF8 381 aa11.52□□□□□ -0.57
CTDSPL2-201ENST00000260327 PPFIBP1Q86W92 1011 aa11.52□□□□□ -0.57
CTDSPL2-201ENST00000260327 CYP46A1Q9Y6A2 500 aa11.52□□□□□ -0.57
CTDSPL2-201ENST00000260327 MAPKBP1O60336 1514 aa11.52□□□□□ -0.57
CTDSPL2-201ENST00000260327 GOLGA6L10A6NI86 522 aa11.52□□□□□ -0.57
CTDSPL2-201ENST00000260327 PSME1Q06323 249 aa11.52□□□□□ -0.57
CTDSPL2-201ENST00000260327 CDK19Q9BWU1 502 aa11.52□□□□□ -0.57
CTDSPL2-201ENST00000260327 HECW1Q76N89 1606 aa11.52□□□□□ -0.57
CTDSPL2-201ENST00000260327 LRPPRCP42704 1394 aaKnown RBP11.52□□□□□ -0.57
CTDSPL2-201ENST00000260327 NLRP6P59044 892 aa11.51□□□□□ -0.57
CTDSPL2-201ENST00000260327 MAP3K11Q16584 847 aa11.51□□□□□ -0.57
CTDSPL2-201ENST00000260327 CWC27Q6UX04 472 aaKnown RBP11.51□□□□□ -0.57
CTDSPL2-201ENST00000260327 ERICH2A1L162 156 aa11.51□□□□□ -0.57
CTDSPL2-201ENST00000260327 DHX16O60231 1041 aaKnown RBP11.51□□□□□ -0.57
CTDSPL2-201ENST00000260327 URI1O94763 535 aaPredicted RBP11.51□□□□□ -0.57
CTDSPL2-201ENST00000260327 UPF3BQ9BZI7 483 aaKnown RBP11.51□□□□□ -0.57
CTDSPL2-201ENST00000260327 EXOC6BQ9Y2D4 811 aa11.51□□□□□ -0.57
CTDSPL2-201ENST00000260327 TIGD1Q96MW7 591 aa11.51□□□□□ -0.57
CTDSPL2-201ENST00000260327 GDPD2Q9HCC8 539 aa11.51□□□□□ -0.57
CTDSPL2-201ENST00000260327 RRS1Q15050 365 aaKnown RBP11.51□□□□□ -0.57
CTDSPL2-201ENST00000260327 ODF2Q5BJF6 829 aa11.51□□□□□ -0.57
CTDSPL2-201ENST00000260327 FERMT3Q86UX7 667 aa11.51□□□□□ -0.57
CTDSPL2-201ENST00000260327 SIL1Q9H173 461 aa11.51□□□□□ -0.57
CTDSPL2-201ENST00000260327 CT47A1Q5JQC4 288 aaPredicted RBP11.5□□□□□ -0.57
CTDSPL2-201ENST00000260327 TICAM2Q86XR7 235 aa11.5□□□□□ -0.57
CTDSPL2-201ENST00000260327 TROQ12816 1431 aaPredicted RBP11.5□□□□□ -0.57
CTDSPL2-201ENST00000260327 CCDC181Q5TID7 509 aa11.5□□□□□ -0.57
CTDSPL2-201ENST00000260327 KIF18AQ8NI77 898 aa11.5□□□□□ -0.57
CTDSPL2-201ENST00000260327 LRRFIP2Q9Y608 721 aaKnown RBP11.5□□□□□ -0.57
CTDSPL2-201ENST00000260327 ADCY5O95622 1261 aa11.5□□□□□ -0.57
CTDSPL2-201ENST00000260327 EPS15P42566 896 aa11.5□□□□□ -0.57
CTDSPL2-201ENST00000260327 CCT4P50991 539 aaKnown RBP11.49□□□□□ -0.57
CTDSPL2-201ENST00000260327 CEP57L1Q8IYX8 460 aa11.49□□□□□ -0.57
CTDSPL2-201ENST00000260327 NESP48681 1621 aa11.49□□□□□ -0.57
CTDSPL2-201ENST00000260327 TAX1BP1Q86VP1 789 aa11.49□□□□□ -0.57
CTDSPL2-201ENST00000260327 CLIP2Q9UDT6 1046 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms