RNA–Protein interactions for RNA: ENST00000259154.8

KCTD3-201, Transcript of potassium channel tetramerization domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KCTD3, Length 3,931 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCTD3-201ENST00000259154 VPS37CA5D8V6 355 aaPredicted RBP18.15■□□□□ 0.5
KCTD3-201ENST00000259154 RARSP54136 660 aaKnown RBP18.15■□□□□ 0.5
KCTD3-201ENST00000259154 MVPQ14764 893 aaKnown RBP18.15■□□□□ 0.5
KCTD3-201ENST00000259154 K7ELQ4 463 aaPredicted RBP18.14■□□□□ 0.49
KCTD3-201ENST00000259154 NKTRP30414 1462 aaKnown RBP18.14■□□□□ 0.49
KCTD3-201ENST00000259154 SYNMO15061 1565 aa18.14■□□□□ 0.49
KCTD3-201ENST00000259154 PIK3C2GO75747 1445 aa18.14■□□□□ 0.49
KCTD3-201ENST00000259154 SPDYE4A6NLX3 237 aa18.14■□□□□ 0.49
KCTD3-201ENST00000259154 NUCB2P80303 420 aa18.14■□□□□ 0.49
KCTD3-201ENST00000259154 ZNF518AQ6AHZ1 1483 aa18.13■□□□□ 0.49
KCTD3-201ENST00000259154 FIBPO43427 364 aa18.13■□□□□ 0.49
KCTD3-201ENST00000259154 IFT57Q9NWB7 429 aa18.13■□□□□ 0.49
KCTD3-201ENST00000259154 LARP6Q9BRS8 491 aaKnown RBP18.13■□□□□ 0.49
KCTD3-201ENST00000259154 HDGFP51858 240 aaKnown RBP18.12■□□□□ 0.49
KCTD3-201ENST00000259154 NPATQ14207 1427 aa18.12■□□□□ 0.49
KCTD3-201ENST00000259154 FBXO31Q5XUX0 539 aaPredicted RBP18.11■□□□□ 0.49
KCTD3-201ENST00000259154 TRERF1Q96PN7 1200 aa18.11■□□□□ 0.49
KCTD3-201ENST00000259154 DIP2CQ9Y2E4 1556 aa18.11■□□□□ 0.49
KCTD3-201ENST00000259154 PIK3C2BO00750 1634 aa18.11■□□□□ 0.49
KCTD3-201ENST00000259154 DIP2BQ9P265 1576 aa18.11■□□□□ 0.49
KCTD3-201ENST00000259154 CSPP1Q1MSJ5 1256 aa18.11■□□□□ 0.49
KCTD3-201ENST00000259154 PDCL3Q9H2J4 239 aa18.11■□□□□ 0.49
KCTD3-201ENST00000259154 KDM5AP29375 1690 aaKnown RBP18.1■□□□□ 0.49
KCTD3-201ENST00000259154 IDI1Q13907 227 aa18.1■□□□□ 0.49
KCTD3-201ENST00000259154 NEO1Q92859 1461 aa18.1■□□□□ 0.49
KCTD3-201ENST00000259154 DTNBO60941 627 aa18.1■□□□□ 0.49
KCTD3-201ENST00000259154 C14orf93Q9H972 538 aaKnown RBP18.1■□□□□ 0.49
KCTD3-201ENST00000259154 SSH1Q8WYL5 1049 aa18.09■□□□□ 0.49
KCTD3-201ENST00000259154 CDC45O75419 566 aa18.09■□□□□ 0.49
KCTD3-201ENST00000259154 ATF7IPQ6VMQ6 1270 aa18.09■□□□□ 0.49
KCTD3-201ENST00000259154 CCAR2Q8N163 923 aaKnown RBP18.09■□□□□ 0.49
KCTD3-201ENST00000259154 TSC1Q92574 1164 aa18.09■□□□□ 0.49
KCTD3-201ENST00000259154 CHD1LQ86WJ1 897 aa18.08■□□□□ 0.49
KCTD3-201ENST00000259154 UPF3BQ9BZI7 483 aaKnown RBP18.08■□□□□ 0.48
KCTD3-201ENST00000259154 CCDC39Q9UFE4 941 aa18.07■□□□□ 0.48
KCTD3-201ENST00000259154 HSP90B1P14625 803 aaKnown RBP18.07■□□□□ 0.48
KCTD3-201ENST00000259154 INSRP06213 1382 aa18.07■□□□□ 0.48
KCTD3-201ENST00000259154 NRXN1Q9ULB1 1477 aa18.07■□□□□ 0.48
KCTD3-201ENST00000259154 PHF14O94880 888 aa18.07■□□□□ 0.48
KCTD3-201ENST00000259154 RTF1Q92541 710 aaKnown RBP18.07■□□□□ 0.48
KCTD3-201ENST00000259154 SMARCA5O60264 1052 aaPredicted RBP18.06■□□□□ 0.48
KCTD3-201ENST00000259154 DDX54Q8TDD1 881 aaKnown RBP18.06■□□□□ 0.48
KCTD3-201ENST00000259154 LTV1Q96GA3 475 aaPredicted RBP18.06■□□□□ 0.48
KCTD3-201ENST00000259154 STAC3Q96MF2 364 aa18.06■□□□□ 0.48
KCTD3-201ENST00000259154 KIF13AQ9H1H9 1805 aa18.06■□□□□ 0.48
KCTD3-201ENST00000259154 REC8O95072 547 aa18.05■□□□□ 0.48
KCTD3-201ENST00000259154 MAP4K4O95819 1239 aaPredicted RBP18.05■□□□□ 0.48
KCTD3-201ENST00000259154 ZC3H13Q5T200 1668 aaKnown RBP18.05■□□□□ 0.48
KCTD3-201ENST00000259154 CAMSAP1Q5T5Y3 1602 aa18.05■□□□□ 0.48
KCTD3-201ENST00000259154 A0A0G2JS52 829 aa18.04■□□□□ 0.48
KCTD3-201ENST00000259154 INTS3Q68E01 1043 aaKnown RBP18.04■□□□□ 0.48
KCTD3-201ENST00000259154 PPLO60437 1756 aa18.04■□□□□ 0.48
KCTD3-201ENST00000259154 CD109Q6YHK3 1445 aa18.04■□□□□ 0.48
KCTD3-201ENST00000259154 KIF1BO60333 1816 aa18.04■□□□□ 0.48
KCTD3-201ENST00000259154 ZBTB9Q96C00 473 aa18.04■□□□□ 0.48
KCTD3-201ENST00000259154 CHAMP1Q96JM3 812 aa18.04■□□□□ 0.48
KCTD3-201ENST00000259154 ERICH4A6NGS2 130 aa18.04■□□□□ 0.48
KCTD3-201ENST00000259154 GOLGA6L6A8MZA4 724 aa18.04■□□□□ 0.48
KCTD3-201ENST00000259154 DIAPH1O60610 1272 aaKnown RBP18.04■□□□□ 0.48
KCTD3-201ENST00000259154 TRIM27P14373 513 aa18.04■□□□□ 0.48
KCTD3-201ENST00000259154 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.04■□□□□ 0.48
KCTD3-201ENST00000259154 PRAM1Q96QH2 718 aa18.04■□□□□ 0.48
KCTD3-201ENST00000259154 USP25Q9UHP3 1055 aa18.04■□□□□ 0.48
KCTD3-201ENST00000259154 TSPY26PQ9H489 355 aa18.03■□□□□ 0.48
KCTD3-201ENST00000259154 ADGRB3O60242 1522 aa18.03■□□□□ 0.48
KCTD3-201ENST00000259154 USP19O94966 1318 aa18.03■□□□□ 0.48
KCTD3-201ENST00000259154 HMMRO75330 724 aa18.03■□□□□ 0.48
KCTD3-201ENST00000259154 MAP7D2Q96T17 732 aa18.03■□□□□ 0.48
KCTD3-201ENST00000259154 KIF16BQ96L93 1317 aa18.02■□□□□ 0.48
KCTD3-201ENST00000259154 MYO3AQ8NEV4 1616 aa18.02■□□□□ 0.48
KCTD3-201ENST00000259154 BAG4O95429 457 aaKnown RBP18.02■□□□□ 0.48
KCTD3-201ENST00000259154 TSHZ3Q63HK5 1081 aa18.02■□□□□ 0.48
KCTD3-201ENST00000259154 PRKAR2BP31323 418 aa18.02■□□□□ 0.47
KCTD3-201ENST00000259154 WAPLQ7Z5K2 1190 aa18.02■□□□□ 0.47
KCTD3-201ENST00000259154 NCKAP5LQ9HCH0 1330 aa18.01■□□□□ 0.47
KCTD3-201ENST00000259154 REREQ9P2R6 1566 aa18.01■□□□□ 0.47
KCTD3-201ENST00000259154 GAS2L3Q86XJ1 694 aa18.01■□□□□ 0.47
KCTD3-201ENST00000259154 STK31Q9BXU1 1019 aa18.01■□□□□ 0.47
KCTD3-201ENST00000259154 NGDNQ8NEJ9 315 aaKnown RBP18■□□□□ 0.47
KCTD3-201ENST00000259154 GAS2L2Q8NHY3 880 aa18■□□□□ 0.47
KCTD3-201ENST00000259154 POLR3AO14802 1390 aaPredicted RBP18■□□□□ 0.47
KCTD3-201ENST00000259154 BECN2A8MW95 431 aa18■□□□□ 0.47
KCTD3-201ENST00000259154 PRIM1P49642 420 aaKnown RBP18■□□□□ 0.47
KCTD3-201ENST00000259154 CEBPZQ03701 1054 aaKnown RBP18■□□□□ 0.47
KCTD3-201ENST00000259154 SKIDA1Q1XH10 827 aa18■□□□□ 0.47
KCTD3-201ENST00000259154 GORABQ5T7V8 394 aa18■□□□□ 0.47
KCTD3-201ENST00000259154 ABCC3O15438 1527 aa18■□□□□ 0.47
KCTD3-201ENST00000259154 NPC1L1Q9UHC9 1359 aa17.99■□□□□ 0.47
KCTD3-201ENST00000259154 TULP1O00294 542 aaPredicted RBP17.99■□□□□ 0.47
KCTD3-201ENST00000259154 NRDCO43847 1150 aa17.99■□□□□ 0.47
KCTD3-201ENST00000259154 BICD2Q8TD16 824 aa17.99■□□□□ 0.47
KCTD3-201ENST00000259154 CGNQ9P2M7 1197 aaKnown RBP17.99■□□□□ 0.47
KCTD3-201ENST00000259154 ZRANB1Q9UGI0 708 aa17.99■□□□□ 0.47
KCTD3-201ENST00000259154 GNL2Q13823 731 aaKnown RBP17.99■□□□□ 0.47
KCTD3-201ENST00000259154 CREBRFQ8IUR6 639 aa17.99■□□□□ 0.47
KCTD3-201ENST00000259154 MYOM2P54296 1465 aa17.99■□□□□ 0.47
KCTD3-201ENST00000259154 C17orf53Q8N3J3 647 aaPredicted RBP17.98■□□□□ 0.47
KCTD3-201ENST00000259154 CABP1Q9NZU7 370 aa17.98■□□□□ 0.47
KCTD3-201ENST00000259154 RABEP1Q15276 862 aa17.98■□□□□ 0.47
KCTD3-201ENST00000259154 TBC1D9Q6ZT07 1266 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms