RNA–Protein interactions for RNA: ENST00000256646.6

NOTCH2-201, Transcript of notch 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH2, Length 11,389 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH2-201ENST00000256646 DNA2P51530 1060 aa11.79□□□□□ -0.52
NOTCH2-201ENST00000256646 MPHOSPH8Q99549 860 aa11.79□□□□□ -0.52
NOTCH2-201ENST00000256646 CNTLNQ9NXG0 1405 aa11.79□□□□□ -0.52
NOTCH2-201ENST00000256646 CWC27Q6UX04 472 aaKnown RBP11.78□□□□□ -0.52
NOTCH2-201ENST00000256646 ZNF396Q96N95 335 aaPredicted RBP11.78□□□□□ -0.52
NOTCH2-201ENST00000256646 TDO2P48775 406 aa11.78□□□□□ -0.52
NOTCH2-201ENST00000256646 ZNHIT6Q9NWK9 470 aaKnown RBP11.78□□□□□ -0.52
NOTCH2-201ENST00000256646 AACSQ86V21 672 aa11.78□□□□□ -0.52
NOTCH2-201ENST00000256646 CAMK4Q16566 473 aa11.78□□□□□ -0.52
NOTCH2-201ENST00000256646 TNNT1P13805 278 aa11.78□□□□□ -0.52
NOTCH2-201ENST00000256646 GNAI2P04899 355 aa11.77□□□□□ -0.52
NOTCH2-201ENST00000256646 GNL3LQ9NVN8 582 aaKnown RBP11.77□□□□□ -0.52
NOTCH2-201ENST00000256646 SULT6B1Q6IMI4 303 aa11.77□□□□□ -0.52
NOTCH2-201ENST00000256646 PROSER2Q86WR7 435 aaPredicted RBP11.77□□□□□ -0.52
NOTCH2-201ENST00000256646 ERLIN2O94905 339 aa11.77□□□□□ -0.53
NOTCH2-201ENST00000256646 LIG1P18858 919 aa11.77□□□□□ -0.53
NOTCH2-201ENST00000256646 RAI14Q9P0K7 980 aa11.77□□□□□ -0.53
NOTCH2-201ENST00000256646 GOLGA6L10A6NI86 522 aa11.77□□□□□ -0.53
NOTCH2-201ENST00000256646 LEKR1Q6ZMV7 388 aa11.77□□□□□ -0.53
NOTCH2-201ENST00000256646 IL27Q8NEV9 243 aa11.77□□□□□ -0.53
NOTCH2-201ENST00000256646 PRAM1Q96QH2 718 aa11.77□□□□□ -0.53
NOTCH2-201ENST00000256646 ECM2O94769 699 aaPredicted RBP11.77□□□□□ -0.53
NOTCH2-201ENST00000256646 RRS1Q15050 365 aaKnown RBP11.77□□□□□ -0.53
NOTCH2-201ENST00000256646 DHX57Q6P158 1386 aaKnown RBP11.77□□□□□ -0.53
NOTCH2-201ENST00000256646 RUSC2Q8N2Y8 1516 aa11.77□□□□□ -0.53
NOTCH2-201ENST00000256646 PLCD3Q8N3E9 789 aa11.76□□□□□ -0.53
NOTCH2-201ENST00000256646 TWISTNBQ3B726 338 aaPredicted RBP11.76□□□□□ -0.53
NOTCH2-201ENST00000256646 PLEKHO1Q53GL0 409 aaPredicted RBP11.76□□□□□ -0.53
NOTCH2-201ENST00000256646 HDGFL1Q5TGJ6 251 aa11.76□□□□□ -0.53
NOTCH2-201ENST00000256646 SOGA3Q5TF21 947 aa11.76□□□□□ -0.53
NOTCH2-201ENST00000256646 KIF7Q2M1P5 1343 aa11.76□□□□□ -0.53
NOTCH2-201ENST00000256646 ERCC4Q92889 916 aaPredicted RBP11.76□□□□□ -0.53
NOTCH2-201ENST00000256646 CWC15Q9P013 229 aaKnown RBP11.76□□□□□ -0.53
NOTCH2-201ENST00000256646 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.75□□□□□ -0.53
NOTCH2-201ENST00000256646 IL1RAPL2Q9NP60 686 aa11.75□□□□□ -0.53
NOTCH2-201ENST00000256646 TCP11L2Q8N4U5 519 aa11.75□□□□□ -0.53
NOTCH2-201ENST00000256646 PTPRGP23470 1445 aa11.75□□□□□ -0.53
NOTCH2-201ENST00000256646 TATP17735 454 aaPredicted RBP11.75□□□□□ -0.53
NOTCH2-201ENST00000256646 CCDC57Q2TAC2 916 aa11.75□□□□□ -0.53
NOTCH2-201ENST00000256646 LARP6Q9BRS8 491 aaKnown RBP11.75□□□□□ -0.53
NOTCH2-201ENST00000256646 RSPH4AQ5TD94 716 aa11.75□□□□□ -0.53
NOTCH2-201ENST00000256646 GPRASP1Q5JY77 1395 aa11.75□□□□□ -0.53
NOTCH2-201ENST00000256646 UBA5Q9GZZ9 404 aa11.75□□□□□ -0.53
NOTCH2-201ENST00000256646 MIA2Q96PC5 1412 aa11.75□□□□□ -0.53
NOTCH2-201ENST00000256646 NUTM1Q86Y26 1132 aa11.75□□□□□ -0.53
NOTCH2-201ENST00000256646 CCDC113Q9H0I3 377 aa11.75□□□□□ -0.53
NOTCH2-201ENST00000256646 ZRSR2Q15696 482 aaKnown RBP11.74□□□□□ -0.53
NOTCH2-201ENST00000256646 KIAA1328Q86T90 577 aa11.74□□□□□ -0.53
NOTCH2-201ENST00000256646 CYP46A1Q9Y6A2 500 aa11.74□□□□□ -0.53
NOTCH2-201ENST00000256646 WDR78Q5VTH9 848 aa11.74□□□□□ -0.53
NOTCH2-201ENST00000256646 SMARCA5O60264 1052 aaPredicted RBP11.74□□□□□ -0.53
NOTCH2-201ENST00000256646 JAKMIP1Q96N16 626 aaKnown RBP11.74□□□□□ -0.53
NOTCH2-201ENST00000256646 ARHGAP5Q13017 1502 aa11.74□□□□□ -0.53
NOTCH2-201ENST00000256646 STIM1Q13586 685 aa11.74□□□□□ -0.53
NOTCH2-201ENST00000256646 SCLT1Q96NL6 688 aa11.74□□□□□ -0.53
NOTCH2-201ENST00000256646 GUCY1B3Q02153 619 aa11.74□□□□□ -0.53
NOTCH2-201ENST00000256646 GBP2P32456 591 aaPredicted RBP11.74□□□□□ -0.53
NOTCH2-201ENST00000256646 CCDC82Q8N4S0 544 aa11.74□□□□□ -0.53
NOTCH2-201ENST00000256646 SPDYE4A6NLX3 237 aa11.74□□□□□ -0.53
NOTCH2-201ENST00000256646 LRP2BPQ9P2M1 347 aa11.74□□□□□ -0.53
NOTCH2-201ENST00000256646 SMG6Q86US8 1419 aaKnown RBP11.74□□□□□ -0.53
NOTCH2-201ENST00000256646 ABCF2Q9UG63 623 aa11.73□□□□□ -0.53
NOTCH2-201ENST00000256646 ZNF530Q6P9A1 599 aaPredicted RBP11.73□□□□□ -0.53
NOTCH2-201ENST00000256646 ZBTB9Q96C00 473 aa11.73□□□□□ -0.53
NOTCH2-201ENST00000256646 CDK19Q9BWU1 502 aa11.73□□□□□ -0.53
NOTCH2-201ENST00000256646 IDH1O75874 414 aaKnown RBP11.73□□□□□ -0.53
NOTCH2-201ENST00000256646 TTLL12Q14166 644 aaPredicted RBP11.73□□□□□ -0.53
NOTCH2-201ENST00000256646 LARP1BQ659C4 914 aaKnown RBP11.73□□□□□ -0.53
NOTCH2-201ENST00000256646 TRIM22Q8IYM9 498 aa11.73□□□□□ -0.53
NOTCH2-201ENST00000256646 KLHL10Q6JEL2 608 aa11.73□□□□□ -0.53
NOTCH2-201ENST00000256646 BTBD11A6QL63 1104 aa11.73□□□□□ -0.53
NOTCH2-201ENST00000256646 CFAP70Q5T0N1 1121 aa11.73□□□□□ -0.53
NOTCH2-201ENST00000256646 AKNAQ7Z591 1439 aa11.72□□□□□ -0.53
NOTCH2-201ENST00000256646 MINDY4BA8MYZ0 360 aa11.72□□□□□ -0.53
NOTCH2-201ENST00000256646 LRRCC1Q9C099 1032 aa11.72□□□□□ -0.53
NOTCH2-201ENST00000256646 GOPCQ9HD26 462 aa11.72□□□□□ -0.53
NOTCH2-201ENST00000256646 PPFIA3O75145 1194 aa11.72□□□□□ -0.53
NOTCH2-201ENST00000256646 KIAA0754O94854 1291 aa11.72□□□□□ -0.53
NOTCH2-201ENST00000256646 BCCIPQ9P287 314 aaKnown RBP eCLIP11.72□□□□□ -0.53
NOTCH2-201ENST00000256646 PRDM10Q9NQV6 1147 aa11.72□□□□□ -0.53
NOTCH2-201ENST00000256646 MRE11P49959 708 aa11.72□□□□□ -0.53
NOTCH2-201ENST00000256646 UQCRHLA0A096LP55 91 aa11.72□□□□□ -0.53
NOTCH2-201ENST00000256646 UQCRHP07919 91 aa11.72□□□□□ -0.53
NOTCH2-201ENST00000256646 ZFP91Q96JP5 570 aaPredicted RBP11.72□□□□□ -0.53
NOTCH2-201ENST00000256646 LETM1O95202 739 aaPredicted RBP11.71□□□□□ -0.53
NOTCH2-201ENST00000256646 ERC1Q8IUD2 1116 aa11.71□□□□□ -0.53
NOTCH2-201ENST00000256646 GNAI3P08754 354 aa11.71□□□□□ -0.53
NOTCH2-201ENST00000256646 GAS2L2Q8NHY3 880 aa11.71□□□□□ -0.53
NOTCH2-201ENST00000256646 FILIP1Q7Z7B0 1213 aa11.71□□□□□ -0.53
NOTCH2-201ENST00000256646 UBAC1Q9BSL1 405 aa11.71□□□□□ -0.53
NOTCH2-201ENST00000256646 USHBP1Q8N6Y0 703 aa11.71□□□□□ -0.53
NOTCH2-201ENST00000256646 PDRG1Q9NUG6 133 aa11.71□□□□□ -0.54
NOTCH2-201ENST00000256646 ZC3H6P61129 1189 aaKnown RBP11.71□□□□□ -0.54
NOTCH2-201ENST00000256646 NACAP1Q9BZK3 213 aa11.71□□□□□ -0.54
NOTCH2-201ENST00000256646 CCDC102AQ96A19 550 aa11.7□□□□□ -0.54
NOTCH2-201ENST00000256646 GOLGA6L10A0A0M3HER8 536 aa11.7□□□□□ -0.54
NOTCH2-201ENST00000256646 SKAP1Q86WV1 359 aa11.7□□□□□ -0.54
NOTCH2-201ENST00000256646 CCDC7Q96M83 1385 aa11.7□□□□□ -0.54
NOTCH2-201ENST00000256646 CASTP20810 708 aaKnown RBP11.7□□□□□ -0.54
NOTCH2-201ENST00000256646 CTNNBL1Q8WYA6 563 aaPredicted RBP11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms