RNA–Protein interactions for RNA: ENST00000250489.8

TMEM55B-201, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TMEM55B, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-201ENST00000250489 RIMS1Q86UR5 1692 aaKnown RBP32.3■■■□□ 2.76
TMEM55B-201ENST00000250489 CALD1Q05682 793 aaKnown RBP32.29■■■□□ 2.76
TMEM55B-201ENST00000250489 PMFBP1Q8TBY8 1022 aa32.28■■■□□ 2.76
TMEM55B-201ENST00000250489 RGS3P49796 1198 aa32.28■■■□□ 2.76
TMEM55B-201ENST00000250489 NPM2Q86SE8 214 aaKnown RBP32.28■■■□□ 2.76
TMEM55B-201ENST00000250489 PCDHB15Q9Y5E8 787 aa32.28■■■□□ 2.76
TMEM55B-201ENST00000250489 FTSJ3Q8IY81 847 aaKnown RBP32.27■■■□□ 2.76
TMEM55B-201ENST00000250489 TTC21AQ8NDW8 1320 aa32.27■■■□□ 2.76
TMEM55B-201ENST00000250489 PIK3R4Q99570 1358 aa32.27■■■□□ 2.76
TMEM55B-201ENST00000250489 PEAK1Q9H792 1746 aa32.27■■■□□ 2.76
TMEM55B-201ENST00000250489 RGPD8O14715 1765 aaPredicted RBP32.26■■■□□ 2.75
TMEM55B-201ENST00000250489 TRIM27P14373 513 aa32.26■■■□□ 2.75
TMEM55B-201ENST00000250489 EIF4A2Q14240 407 aaKnown RBP32.26■■■□□ 2.75
TMEM55B-201ENST00000250489 DLG5Q8TDM6 1919 aa32.26■■■□□ 2.75
TMEM55B-201ENST00000250489 FAM161AQ3B820 660 aa32.25■■■□□ 2.75
TMEM55B-201ENST00000250489 ALDH1L2Q3SY69 923 aa32.25■■■□□ 2.75
TMEM55B-201ENST00000250489 THUMPD2Q9BTF0 503 aaKnown RBP32.25■■■□□ 2.75
TMEM55B-201ENST00000250489 PAK3O75914 559 aaPredicted RBP32.23■■■□□ 2.75
TMEM55B-201ENST00000250489 LMOD3Q0VAK6 560 aa32.23■■■□□ 2.75
TMEM55B-201ENST00000250489 ATF7IPQ6VMQ6 1270 aa32.23■■■□□ 2.75
TMEM55B-201ENST00000250489 IFT57Q9NWB7 429 aa32.23■■■□□ 2.75
TMEM55B-201ENST00000250489 LAS1LQ9Y4W2 734 aaKnown RBP32.23■■■□□ 2.75
TMEM55B-201ENST00000250489 KCNA6P17658 529 aa32.23■■■□□ 2.75
TMEM55B-201ENST00000250489 NOB1Q9ULX3 412 aaKnown RBP32.23■■■□□ 2.75
TMEM55B-201ENST00000250489 ANKARQ7Z5J8 1434 aa32.23■■■□□ 2.75
TMEM55B-201ENST00000250489 KIF16BQ96L93 1317 aa32.22■■■□□ 2.75
TMEM55B-201ENST00000250489 C8orf34Q49A92 452 aa32.22■■■□□ 2.75
TMEM55B-201ENST00000250489 GNAI1P63096 354 aa32.21■■■□□ 2.75
TMEM55B-201ENST00000250489 ZNF428Q96B54 188 aa32.21■■■□□ 2.75
TMEM55B-201ENST00000250489 ZNF853P0CG23 659 aa32.21■■■□□ 2.75
TMEM55B-201ENST00000250489 NGDNQ8NEJ9 315 aaKnown RBP32.19■■■□□ 2.74
TMEM55B-201ENST00000250489 ZBTB47Q9UFB7 747 aaPredicted RBP32.19■■■□□ 2.74
TMEM55B-201ENST00000250489 RGPD1P0DJD0 1748 aa32.19■■■□□ 2.74
TMEM55B-201ENST00000250489 FMN2Q9NZ56 1722 aa32.18■■■□□ 2.74
TMEM55B-201ENST00000250489 ZNF142P52746 1687 aaPredicted RBP32.18■■■□□ 2.74
TMEM55B-201ENST00000250489 AEBP1Q8IUX7 1158 aa32.18■■■□□ 2.74
TMEM55B-201ENST00000250489 IPO8O15397 1037 aaKnown RBP32.17■■■□□ 2.74
TMEM55B-201ENST00000250489 SULT6B1Q6IMI4 303 aa32.17■■■□□ 2.74
TMEM55B-201ENST00000250489 BRPF1P55201 1214 aaPredicted RBP32.16■■■□□ 2.74
TMEM55B-201ENST00000250489 HSP90AB2PQ58FF8 381 aa32.16■■■□□ 2.74
TMEM55B-201ENST00000250489 RWDD1Q9H446 243 aaPredicted RBP32.16■■■□□ 2.74
TMEM55B-201ENST00000250489 PIK3C2AO00443 1686 aa32.16■■■□□ 2.74
TMEM55B-201ENST00000250489 MBIPQ9NS73 344 aa32.16■■■□□ 2.74
TMEM55B-201ENST00000250489 DDX19BQ9UMR2 479 aa32.16■■■□□ 2.74
TMEM55B-201ENST00000250489 VAMP4O75379 141 aa32.14■■■□□ 2.74
TMEM55B-201ENST00000250489 CFAP44Q96MT7 982 aa32.14■■■□□ 2.74
TMEM55B-201ENST00000250489 ITPRIPQ8IWB1 547 aa32.13■■■□□ 2.73
TMEM55B-201ENST00000250489 MAP3K19Q56UN5 1328 aa32.13■■■□□ 2.73
TMEM55B-201ENST00000250489 ADAMTSL3P82987 1691 aa32.12■■■□□ 2.73
TMEM55B-201ENST00000250489 FAM83GA6ND36 823 aa32.12■■■□□ 2.73
TMEM55B-201ENST00000250489 SOX12O15370 315 aa32.12■■■□□ 2.73
TMEM55B-201ENST00000250489 TMEM57Q8N5G2 664 aa32.12■■■□□ 2.73
TMEM55B-201ENST00000250489 ANKLE2Q86XL3 938 aa32.11■■■□□ 2.73
TMEM55B-201ENST00000250489 CHD2O14647 1828 aaKnown RBP32.11■■■□□ 2.73
TMEM55B-201ENST00000250489 SBNO1A3KN83 1393 aa32.1■■■□□ 2.73
TMEM55B-201ENST00000250489 TSPYL6Q8N831 410 aa32.1■■■□□ 2.73
TMEM55B-201ENST00000250489 ARHGEF10O15013 1369 aa32.09■■■□□ 2.73
TMEM55B-201ENST00000250489 FLT4P35916 1363 aa32.09■■■□□ 2.73
TMEM55B-201ENST00000250489 VIRMAQ69YN4 1812 aaKnown RBP32.09■■■□□ 2.73
TMEM55B-201ENST00000250489 MRPL50Q8N5N7 158 aaKnown RBP32.08■■■□□ 2.73
TMEM55B-201ENST00000250489 DCTN1Q14203 1278 aa32.07■■■□□ 2.72
TMEM55B-201ENST00000250489 PDZRN3Q9UPQ7 1066 aa32.07■■■□□ 2.72
TMEM55B-201ENST00000250489 USP54Q70EL1 1684 aa32.05■■■□□ 2.72
TMEM55B-201ENST00000250489 MARF1Q9Y4F3 1742 aaKnown RBP32.04■■■□□ 2.72
TMEM55B-201ENST00000250489 HDAC1Q13547 482 aaPredicted RBP32.04■■■□□ 2.72
TMEM55B-201ENST00000250489 TWISTNBQ3B726 338 aaPredicted RBP32.04■■■□□ 2.72
TMEM55B-201ENST00000250489 ARHGAP45Q92619 1136 aa32.03■■■□□ 2.72
TMEM55B-201ENST00000250489 ZBTB40Q9NUA8 1239 aa32.03■■■□□ 2.72
TMEM55B-201ENST00000250489 C8orf58Q8NAV2 365 aa32.03■■■□□ 2.72
TMEM55B-201ENST00000250489 DDRGK1Q96HY6 314 aa32.02■■■□□ 2.72
TMEM55B-201ENST00000250489 NLRP6P59044 892 aa32.01■■■□□ 2.72
TMEM55B-201ENST00000250489 ELL2O00472 640 aaPredicted RBP32.01■■■□□ 2.71
TMEM55B-201ENST00000250489 AMPHP49418 695 aa31.99■■■□□ 2.71
TMEM55B-201ENST00000250489 KDRP35968 1356 aa31.98■■■□□ 2.71
TMEM55B-201ENST00000250489 SETD1BQ9UPS6 1966 aaKnown RBP31.96■■■□□ 2.71
TMEM55B-201ENST00000250489 IGSF1Q8N6C5 1336 aa31.96■■■□□ 2.71
TMEM55B-201ENST00000250489 KIF24Q5T7B8 1368 aa31.96■■■□□ 2.71
TMEM55B-201ENST00000250489 MCM10Q7L590 875 aa31.96■■■□□ 2.71
TMEM55B-201ENST00000250489 CHL1O00533 1208 aa31.95■■■□□ 2.71
TMEM55B-201ENST00000250489 PHF8Q9UPP1 1060 aa31.94■■■□□ 2.7
TMEM55B-201ENST00000250489 ABCC4O15439 1325 aa31.93■■■□□ 2.7
TMEM55B-201ENST00000250489 EYA1Q99502 592 aa31.93■■■□□ 2.7
TMEM55B-201ENST00000250489 ADGRL3Q9HAR2 1447 aa31.92■■■□□ 2.7
TMEM55B-201ENST00000250489 CRB1P82279 1406 aa31.92■■■□□ 2.7
TMEM55B-201ENST00000250489 NUTM2GQ5VZR2 741 aa31.92■■■□□ 2.7
TMEM55B-201ENST00000250489 SMC5Q8IY18 1101 aa31.92■■■□□ 2.7
TMEM55B-201ENST00000250489 ABTB2Q8N961 1025 aa31.92■■■□□ 2.7
TMEM55B-201ENST00000250489 MTHFSDQ2M296 383 aaKnown RBP31.9■■■□□ 2.7
TMEM55B-201ENST00000250489 NPHP4O75161 1426 aaPredicted RBP31.9■■■□□ 2.7
TMEM55B-201ENST00000250489 ZBTB7BO15156 539 aaPredicted RBP31.9■■■□□ 2.7
TMEM55B-201ENST00000250489 HOXC9P31274 260 aa31.9■■■□□ 2.7
TMEM55B-201ENST00000250489 CHMP4BQ9H444 224 aaKnown RBP31.9■■■□□ 2.7
TMEM55B-201ENST00000250489 KIAA0232Q92628 1395 aa31.89■■■□□ 2.7
TMEM55B-201ENST00000250489 RBM33Q96EV2 1170 aaKnown RBP31.88■■■□□ 2.69
TMEM55B-201ENST00000250489 API5Q9BZZ5 524 aaKnown RBP31.88■■■□□ 2.69
TMEM55B-201ENST00000250489 FOXO3O43524 673 aa31.87■■■□□ 2.69
TMEM55B-201ENST00000250489 HAP1P54257 671 aaPredicted RBP31.87■■■□□ 2.69
TMEM55B-201ENST00000250489 NWD1Q149M9 1564 aa31.86■■■□□ 2.69
TMEM55B-201ENST00000250489 USP19O94966 1318 aa31.86■■■□□ 2.69
TMEM55B-201ENST00000250489 KRT24Q2M2I5 525 aa31.85■■■□□ 2.69
Retrieved 100 of 20,778 RNA–protein pairs in 133.3 ms