RNA–Protein interactions for RNA: ENST00000244670.12

KLHDC3-201, Transcript of kelch domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene KLHDC3, Length 1,903 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC3-201ENST00000244670 TRPM3Q9HCF6 1732 aaPredicted RBP23.49■■□□□ 1.35
KLHDC3-201ENST00000244670 TRMT2AQ8IZ69 625 aaKnown RBP23.49■■□□□ 1.35
KLHDC3-201ENST00000244670 FLT4P35916 1363 aa23.49■■□□□ 1.35
KLHDC3-201ENST00000244670 PLEKHG5O94827 1062 aa23.49■■□□□ 1.35
KLHDC3-201ENST00000244670 RRP1P56182 461 aaKnown RBP23.49■■□□□ 1.35
KLHDC3-201ENST00000244670 CCDC27Q2M243 656 aa23.49■■□□□ 1.35
KLHDC3-201ENST00000244670 LMOD2Q6P5Q4 547 aa23.49■■□□□ 1.35
KLHDC3-201ENST00000244670 KRT28Q7Z3Y7 464 aa23.49■■□□□ 1.35
KLHDC3-201ENST00000244670 DDX17Q92841 729 aaKnown RBP23.47■■□□□ 1.35
KLHDC3-201ENST00000244670 PHACTR3Q96KR7 559 aa23.47■■□□□ 1.35
KLHDC3-201ENST00000244670 LTN1O94822 1766 aa23.46■■□□□ 1.35
KLHDC3-201ENST00000244670 NEFMP07197 916 aa23.46■■□□□ 1.35
KLHDC3-201ENST00000244670 RIPK4P57078 832 aa23.46■■□□□ 1.35
KLHDC3-201ENST00000244670 AEBP1Q8IUX7 1158 aa23.45■■□□□ 1.35
KLHDC3-201ENST00000244670 WDR63Q8IWG1 891 aa23.45■■□□□ 1.34
KLHDC3-201ENST00000244670 TRIM35Q9UPQ4 493 aa23.45■■□□□ 1.34
KLHDC3-201ENST00000244670 RGPD1P0DJD0 1748 aa23.44■■□□□ 1.34
KLHDC3-201ENST00000244670 NCBP3Q53F19 620 aaKnown RBP23.44■■□□□ 1.34
KLHDC3-201ENST00000244670 NFAT5O94916 1531 aa23.44■■□□□ 1.34
KLHDC3-201ENST00000244670 SULT6B1Q6IMI4 303 aa23.43■■□□□ 1.34
KLHDC3-201ENST00000244670 HOXC9P31274 260 aa23.43■■□□□ 1.34
KLHDC3-201ENST00000244670 ZBTB7CA1YPR0 619 aa23.41■■□□□ 1.34
KLHDC3-201ENST00000244670 B4GALNT3Q6L9W6 998 aa23.41■■□□□ 1.34
KLHDC3-201ENST00000244670 NFE2L2Q16236 605 aa23.39■■□□□ 1.34
KLHDC3-201ENST00000244670 ALS2Q96Q42 1657 aa23.39■■□□□ 1.34
KLHDC3-201ENST00000244670 KCNH5Q8NCM2 988 aa23.39■■□□□ 1.33
KLHDC3-201ENST00000244670 TSHZ2Q9NRE2 1034 aa23.39■■□□□ 1.33
KLHDC3-201ENST00000244670 DLG5Q8TDM6 1919 aa23.39■■□□□ 1.33
KLHDC3-201ENST00000244670 KIF24Q5T7B8 1368 aa23.38■■□□□ 1.33
KLHDC3-201ENST00000244670 PLIN1O60240 522 aa23.38■■□□□ 1.33
KLHDC3-201ENST00000244670 LTV1Q96GA3 475 aaPredicted RBP23.38■■□□□ 1.33
KLHDC3-201ENST00000244670 SLIT3O75094 1523 aa23.37■■□□□ 1.33
KLHDC3-201ENST00000244670 NPHP3Q7Z494 1330 aa23.37■■□□□ 1.33
KLHDC3-201ENST00000244670 ARHGEF10O15013 1369 aa23.37■■□□□ 1.33
KLHDC3-201ENST00000244670 RTL1A6NKG5 1358 aa23.36■■□□□ 1.33
KLHDC3-201ENST00000244670 GCP02774 474 aa23.36■■□□□ 1.33
KLHDC3-201ENST00000244670 EYA1Q99502 592 aa23.36■■□□□ 1.33
KLHDC3-201ENST00000244670 BRINP3Q76B58 766 aa23.35■■□□□ 1.33
KLHDC3-201ENST00000244670 MYH16Q9H6N6 1097 aa23.35■■□□□ 1.33
KLHDC3-201ENST00000244670 USP19O94966 1318 aa23.35■■□□□ 1.33
KLHDC3-201ENST00000244670 TSR2Q969E8 191 aaKnown RBP23.34■■□□□ 1.33
KLHDC3-201ENST00000244670 SLAIN2Q9P270 581 aa23.33■■□□□ 1.33
KLHDC3-201ENST00000244670 IGSF1Q8N6C5 1336 aa23.33■■□□□ 1.33
KLHDC3-201ENST00000244670 PXDNQ92626 1479 aa23.33■■□□□ 1.33
KLHDC3-201ENST00000244670 IP6K1Q92551 441 aa23.33■■□□□ 1.32
KLHDC3-201ENST00000244670 THUMPD2Q9BTF0 503 aaKnown RBP23.33■■□□□ 1.32
KLHDC3-201ENST00000244670 MED1Q15648 1581 aaPredicted RBP23.32■■□□□ 1.32
KLHDC3-201ENST00000244670 FANCIQ9NVI1 1328 aa23.31■■□□□ 1.32
KLHDC3-201ENST00000244670 TNS3Q68CZ2 1445 aa23.31■■□□□ 1.32
KLHDC3-201ENST00000244670 EXOC6Q8TAG9 804 aa23.31■■□□□ 1.32
KLHDC3-201ENST00000244670 PHRF1Q9P1Y6 1649 aaKnown RBP23.3■■□□□ 1.32
KLHDC3-201ENST00000244670 KDRP35968 1356 aa23.3■■□□□ 1.32
KLHDC3-201ENST00000244670 IL16Q14005 1332 aa23.29■■□□□ 1.32
KLHDC3-201ENST00000244670 BCAR3O75815 825 aa23.29■■□□□ 1.32
KLHDC3-201ENST00000244670 ARHGEF25Q86VW2 580 aa23.29■■□□□ 1.32
KLHDC3-201ENST00000244670 FAM83GA6ND36 823 aa23.29■■□□□ 1.32
KLHDC3-201ENST00000244670 USHBP1Q8N6Y0 703 aa23.28■■□□□ 1.32
KLHDC3-201ENST00000244670 LAS1LQ9Y4W2 734 aaKnown RBP23.28■■□□□ 1.32
KLHDC3-201ENST00000244670 RGPD2P0DJD1 1756 aa23.27■■□□□ 1.32
KLHDC3-201ENST00000244670 ZC3H6P61129 1189 aaKnown RBP23.27■■□□□ 1.32
KLHDC3-201ENST00000244670 DCTN1Q14203 1278 aa23.27■■□□□ 1.32
KLHDC3-201ENST00000244670 CABLES1Q8TDN4 633 aa23.27■■□□□ 1.32
KLHDC3-201ENST00000244670 SPATA31A3Q5VYP0 1347 aa23.26■■□□□ 1.31
KLHDC3-201ENST00000244670 LMOD3Q0VAK6 560 aa23.26■■□□□ 1.31
KLHDC3-201ENST00000244670 C20orf194Q5TEA3 1177 aa23.25■■□□□ 1.31
KLHDC3-201ENST00000244670 CCDC136Q96JN2 1154 aa23.25■■□□□ 1.31
KLHDC3-201ENST00000244670 EXOSC9Q06265 439 aaKnown RBP23.25■■□□□ 1.31
KLHDC3-201ENST00000244670 RGPD5Q99666 1765 aa23.24■■□□□ 1.31
KLHDC3-201ENST00000244670 MTHFSDQ2M296 383 aaKnown RBP23.23■■□□□ 1.31
KLHDC3-201ENST00000244670 NBPF6Q5VWK0 638 aa23.23■■□□□ 1.31
KLHDC3-201ENST00000244670 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.23■■□□□ 1.31
KLHDC3-201ENST00000244670 LRRC59Q96AG4 307 aaKnown RBP23.23■■□□□ 1.31
KLHDC3-201ENST00000244670 NBPF4Q96M43 638 aa23.23■■□□□ 1.31
KLHDC3-201ENST00000244670 AXIN2Q9Y2T1 843 aa23.22■■□□□ 1.31
KLHDC3-201ENST00000244670 CRYBG1Q9Y4K1 1723 aa23.22■■□□□ 1.31
KLHDC3-201ENST00000244670 RARSP54136 660 aaKnown RBP23.21■■□□□ 1.31
KLHDC3-201ENST00000244670 CALD1Q05682 793 aaKnown RBP23.21■■□□□ 1.31
KLHDC3-201ENST00000244670 CRBNQ96SW2 442 aa23.21■■□□□ 1.31
KLHDC3-201ENST00000244670 MCM10Q7L590 875 aa23.21■■□□□ 1.31
KLHDC3-201ENST00000244670 BCL2L13Q9BXK5 485 aa23.21■■□□□ 1.31
KLHDC3-201ENST00000244670 ANKRD24Q8TF21 1146 aa23.2■■□□□ 1.3
KLHDC3-201ENST00000244670 SOS2Q07890 1332 aaPredicted RBP23.2■■□□□ 1.3
KLHDC3-201ENST00000244670 IFT57Q9NWB7 429 aa23.19■■□□□ 1.3
KLHDC3-201ENST00000244670 GNAI1P63096 354 aa23.18■■□□□ 1.3
KLHDC3-201ENST00000244670 MBIPQ9NS73 344 aa23.18■■□□□ 1.3
KLHDC3-201ENST00000244670 NHSL1Q5SYE7 1610 aa23.17■■□□□ 1.3
KLHDC3-201ENST00000244670 ZNF853P0CG23 659 aa23.17■■□□□ 1.3
KLHDC3-201ENST00000244670 CANXP27824 592 aaKnown RBP23.17■■□□□ 1.3
KLHDC3-201ENST00000244670 GAS2L2Q8NHY3 880 aa23.17■■□□□ 1.3
KLHDC3-201ENST00000244670 LTBP4Q8N2S1 1624 aa23.17■■□□□ 1.3
KLHDC3-201ENST00000244670 FRAT1Q92837 279 aaPredicted RBP23.16■■□□□ 1.3
KLHDC3-201ENST00000244670 CFAP44Q96MT7 982 aa23.16■■□□□ 1.3
KLHDC3-201ENST00000244670 CT47B1P0C2W7 299 aaPredicted RBP23.15■■□□□ 1.3
KLHDC3-201ENST00000244670 CHRNA2Q15822 529 aa23.15■■□□□ 1.3
KLHDC3-201ENST00000244670 COL18A1P39060 1754 aa23.14■■□□□ 1.3
KLHDC3-201ENST00000244670 RTF1Q92541 710 aaKnown RBP23.14■■□□□ 1.29
KLHDC3-201ENST00000244670 KIAA0232Q92628 1395 aa23.13■■□□□ 1.29
KLHDC3-201ENST00000244670 ERBB3P21860 1342 aa23.13■■□□□ 1.29
KLHDC3-201ENST00000244670 CAMTA1Q9Y6Y1 1673 aa23.11■■□□□ 1.29
KLHDC3-201ENST00000244670 SMC4Q9NTJ3 1288 aa23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 173.2 ms