RNA–Protein interactions for RNA: ENST00000244360.6

RNF39-201, Transcript of ring finger protein 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF39, Length 2,206 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39-201ENST00000244360 ALDH1L2Q3SY69 923 aa27.99■■■□□ 2.07
RNF39-201ENST00000244360 ATF7IPQ6VMQ6 1270 aa27.99■■■□□ 2.07
RNF39-201ENST00000244360 TTC21BQ7Z4L5 1316 aa27.98■■■□□ 2.07
RNF39-201ENST00000244360 CALD1Q05682 793 aaKnown RBP27.98■■■□□ 2.07
RNF39-201ENST00000244360 ZNF428Q96B54 188 aa27.98■■■□□ 2.07
RNF39-201ENST00000244360 DIP2AQ14689 1571 aa27.98■■■□□ 2.07
RNF39-201ENST00000244360 USP6P35125 1406 aa27.97■■■□□ 2.07
RNF39-201ENST00000244360 KIF16BQ96L93 1317 aa27.97■■■□□ 2.07
RNF39-201ENST00000244360 NALCNQ8IZF0 1738 aa27.97■■■□□ 2.07
RNF39-201ENST00000244360 RRS1Q15050 365 aaKnown RBP27.96■■■□□ 2.07
RNF39-201ENST00000244360 RWDD1Q9H446 243 aaPredicted RBP27.96■■■□□ 2.07
RNF39-201ENST00000244360 DAXXQ9UER7 740 aaPredicted RBP27.96■■■□□ 2.07
RNF39-201ENST00000244360 TBX22Q9Y458 520 aa27.96■■■□□ 2.07
RNF39-201ENST00000244360 ACEP12821 1306 aa27.96■■■□□ 2.07
RNF39-201ENST00000244360 BRPF1P55201 1214 aaPredicted RBP27.96■■■□□ 2.07
RNF39-201ENST00000244360 SSH2Q76I76 1423 aa27.95■■■□□ 2.06
RNF39-201ENST00000244360 SLC26A8Q96RN1 970 aa27.94■■■□□ 2.06
RNF39-201ENST00000244360 NOB1Q9ULX3 412 aaKnown RBP27.94■■■□□ 2.06
RNF39-201ENST00000244360 DDX19BQ9UMR2 479 aa27.94■■■□□ 2.06
RNF39-201ENST00000244360 IFT57Q9NWB7 429 aa27.93■■■□□ 2.06
RNF39-201ENST00000244360 ZNF853P0CG23 659 aa27.92■■■□□ 2.06
RNF39-201ENST00000244360 IPO8O15397 1037 aaKnown RBP27.92■■■□□ 2.06
RNF39-201ENST00000244360 USP31Q70CQ4 1352 aa27.92■■■□□ 2.06
RNF39-201ENST00000244360 GNAI1P63096 354 aa27.91■■■□□ 2.06
RNF39-201ENST00000244360 LMOD3Q0VAK6 560 aa27.91■■■□□ 2.06
RNF39-201ENST00000244360 AMOTL2Q9Y2J4 779 aa27.91■■■□□ 2.06
RNF39-201ENST00000244360 DLG5Q8TDM6 1919 aa27.9■■■□□ 2.06
RNF39-201ENST00000244360 PDZRN3Q9UPQ7 1066 aa27.89■■■□□ 2.06
RNF39-201ENST00000244360 XRN1Q8IZH2 1706 aaKnown RBP27.89■■■□□ 2.05
RNF39-201ENST00000244360 HDAC1Q13547 482 aaPredicted RBP27.88■■■□□ 2.05
RNF39-201ENST00000244360 THEMISQ8N1K5 641 aaPredicted RBP27.88■■■□□ 2.05
RNF39-201ENST00000244360 THUMPD2Q9BTF0 503 aaKnown RBP27.87■■■□□ 2.05
RNF39-201ENST00000244360 ITPRIPQ8IWB1 547 aa27.87■■■□□ 2.05
RNF39-201ENST00000244360 PEAK1Q9H792 1746 aa27.87■■■□□ 2.05
RNF39-201ENST00000244360 TMEM57Q8N5G2 664 aa27.86■■■□□ 2.05
RNF39-201ENST00000244360 VAMP4O75379 141 aa27.86■■■□□ 2.05
RNF39-201ENST00000244360 EIF4A2Q14240 407 aaKnown RBP27.86■■■□□ 2.05
RNF39-201ENST00000244360 RGPD1P0DJD0 1748 aa27.85■■■□□ 2.05
RNF39-201ENST00000244360 RIMS1Q86UR5 1692 aaKnown RBP27.85■■■□□ 2.05
RNF39-201ENST00000244360 TTC21AQ8NDW8 1320 aa27.85■■■□□ 2.05
RNF39-201ENST00000244360 CFAP44Q96MT7 982 aa27.84■■■□□ 2.05
RNF39-201ENST00000244360 MBIPQ9NS73 344 aa27.84■■■□□ 2.05
RNF39-201ENST00000244360 ZBTB40Q9NUA8 1239 aa27.84■■■□□ 2.05
RNF39-201ENST00000244360 PIK3R4Q99570 1358 aa27.83■■■□□ 2.05
RNF39-201ENST00000244360 NUTM2FA1L443 756 aa27.82■■■□□ 2.04
RNF39-201ENST00000244360 ARHGAP45Q92619 1136 aa27.82■■■□□ 2.04
RNF39-201ENST00000244360 MRPL50Q8N5N7 158 aaKnown RBP27.82■■■□□ 2.04
RNF39-201ENST00000244360 USP19O94966 1318 aa27.81■■■□□ 2.04
RNF39-201ENST00000244360 TSPYL6Q8N831 410 aa27.79■■■□□ 2.04
RNF39-201ENST00000244360 ANKARQ7Z5J8 1434 aa27.78■■■□□ 2.04
RNF39-201ENST00000244360 AEBP1Q8IUX7 1158 aa27.78■■■□□ 2.04
RNF39-201ENST00000244360 SMC5Q8IY18 1101 aa27.77■■■□□ 2.04
RNF39-201ENST00000244360 NFKBIBQ15653 356 aa27.77■■■□□ 2.04
RNF39-201ENST00000244360 SULT6B1Q6IMI4 303 aa27.76■■■□□ 2.04
RNF39-201ENST00000244360 CEP170BQ9Y4F5 1589 aaPredicted RBP27.76■■■□□ 2.04
RNF39-201ENST00000244360 ARHGEF10O15013 1369 aa27.75■■■□□ 2.03
RNF39-201ENST00000244360 FAM83GA6ND36 823 aa27.75■■■□□ 2.03
RNF39-201ENST00000244360 RGPD8O14715 1765 aaPredicted RBP27.74■■■□□ 2.03
RNF39-201ENST00000244360 FMN2Q9NZ56 1722 aa27.74■■■□□ 2.03
RNF39-201ENST00000244360 TWISTNBQ3B726 338 aaPredicted RBP27.74■■■□□ 2.03
RNF39-201ENST00000244360 HSP90AB2PQ58FF8 381 aa27.74■■■□□ 2.03
RNF39-201ENST00000244360 SEC24BO95487 1268 aa27.73■■■□□ 2.03
RNF39-201ENST00000244360 PIK3C2AO00443 1686 aa27.73■■■□□ 2.03
RNF39-201ENST00000244360 ABCC4O15439 1325 aa27.72■■■□□ 2.03
RNF39-201ENST00000244360 SLC4A3P48751 1232 aa27.72■■■□□ 2.03
RNF39-201ENST00000244360 PLPPR3Q6T4P5 718 aa27.72■■■□□ 2.03
RNF39-201ENST00000244360 C8orf58Q8NAV2 365 aa27.72■■■□□ 2.03
RNF39-201ENST00000244360 SBNO1A3KN83 1393 aa27.72■■■□□ 2.03
RNF39-201ENST00000244360 MAP3K19Q56UN5 1328 aa27.71■■■□□ 2.03
RNF39-201ENST00000244360 CHMP4BQ9H444 224 aaKnown RBP27.71■■■□□ 2.03
RNF39-201ENST00000244360 FLT4P35916 1363 aa27.71■■■□□ 2.03
RNF39-201ENST00000244360 DCTN1Q14203 1278 aa27.7■■■□□ 2.02
RNF39-201ENST00000244360 NGDNQ8NEJ9 315 aaKnown RBP27.69■■■□□ 2.02
RNF39-201ENST00000244360 USP54Q70EL1 1684 aa27.69■■■□□ 2.02
RNF39-201ENST00000244360 ZBTB7BO15156 539 aaPredicted RBP27.69■■■□□ 2.02
RNF39-201ENST00000244360 KCNA6P17658 529 aa27.68■■■□□ 2.02
RNF39-201ENST00000244360 KDRP35968 1356 aa27.67■■■□□ 2.02
RNF39-201ENST00000244360 GSE1Q14687 1217 aa27.67■■■□□ 2.02
RNF39-201ENST00000244360 ELL2O00472 640 aaPredicted RBP27.67■■■□□ 2.02
RNF39-201ENST00000244360 CHL1O00533 1208 aa27.67■■■□□ 2.02
RNF39-201ENST00000244360 KIAA0232Q92628 1395 aa27.65■■■□□ 2.02
RNF39-201ENST00000244360 BECN1Q14457 450 aa27.65■■■□□ 2.02
RNF39-201ENST00000244360 API5Q9BZZ5 524 aaKnown RBP27.65■■■□□ 2.02
RNF39-201ENST00000244360 KIF24Q5T7B8 1368 aa27.65■■■□□ 2.02
RNF39-201ENST00000244360 MARF1Q9Y4F3 1742 aaKnown RBP27.64■■■□□ 2.02
RNF39-201ENST00000244360 CRB1P82279 1406 aa27.64■■■□□ 2.02
RNF39-201ENST00000244360 NUCB1Q02818 461 aa27.64■■■□□ 2.01
RNF39-201ENST00000244360 ZNF142P52746 1687 aaPredicted RBP27.63■■■□□ 2.01
RNF39-201ENST00000244360 HAP1P54257 671 aaPredicted RBP27.63■■■□□ 2.01
RNF39-201ENST00000244360 IGSF1Q8N6C5 1336 aa27.61■■■□□ 2.01
RNF39-201ENST00000244360 TBC1D32Q96NH3 1257 aa27.61■■■□□ 2.01
RNF39-201ENST00000244360 UPF2Q9HAU5 1272 aaKnown RBP27.61■■■□□ 2.01
RNF39-201ENST00000244360 SOX12O15370 315 aa27.61■■■□□ 2.01
RNF39-201ENST00000244360 MCM10Q7L590 875 aa27.6■■■□□ 2.01
RNF39-201ENST00000244360 CHD2O14647 1828 aaKnown RBP27.59■■■□□ 2.01
RNF39-201ENST00000244360 TRHP20396 242 aaPredicted RBP27.58■■■□□ 2.01
RNF39-201ENST00000244360 GCC1Q96CN9 775 aa27.57■■■□□ 2
RNF39-201ENST00000244360 RGS12O14924 1447 aa27.56■■■□□ 2
RNF39-201ENST00000244360 AMPHP49418 695 aa27.56■■■□□ 2
RNF39-201ENST00000244360 CHD1LQ86WJ1 897 aa27.56■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms