RNA–Protein interactions for RNA: ENST00000239243.6

MSX2-201, Transcript of msh homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX2, Length 2,241 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX2-201ENST00000239243 AAMPQ13685 434 aa29.99■■■□□ 2.39
MSX2-201ENST00000239243 RGPD1P0DJD0 1748 aa29.98■■■□□ 2.39
MSX2-201ENST00000239243 MAP3K19Q56UN5 1328 aa29.97■■■□□ 2.39
MSX2-201ENST00000239243 TCERG1O14776 1098 aaKnown RBP29.97■■■□□ 2.39
MSX2-201ENST00000239243 KDM2BQ8NHM5 1336 aa29.97■■■□□ 2.39
MSX2-201ENST00000239243 KIF24Q5T7B8 1368 aa29.97■■■□□ 2.39
MSX2-201ENST00000239243 NLRP6P59044 892 aa29.96■■■□□ 2.39
MSX2-201ENST00000239243 MS4A1P11836 297 aa29.95■■■□□ 2.39
MSX2-201ENST00000239243 HSP90AB2PQ58FF8 381 aa29.95■■■□□ 2.39
MSX2-201ENST00000239243 ARHGEF10O15013 1369 aa29.94■■■□□ 2.38
MSX2-201ENST00000239243 SULT6B1Q6IMI4 303 aa29.94■■■□□ 2.38
MSX2-201ENST00000239243 DLG5Q8TDM6 1919 aa29.93■■■□□ 2.38
MSX2-201ENST00000239243 GNAI1P63096 354 aa29.93■■■□□ 2.38
MSX2-201ENST00000239243 SOX12O15370 315 aa29.92■■■□□ 2.38
MSX2-201ENST00000239243 ZNF428Q96B54 188 aa29.92■■■□□ 2.38
MSX2-201ENST00000239243 IFT57Q9NWB7 429 aa29.92■■■□□ 2.38
MSX2-201ENST00000239243 BCL2L13Q9BXK5 485 aa29.92■■■□□ 2.38
MSX2-201ENST00000239243 MARF1Q9Y4F3 1742 aaKnown RBP29.92■■■□□ 2.38
MSX2-201ENST00000239243 C14orf37Q86TY3 774 aa29.91■■■□□ 2.38
MSX2-201ENST00000239243 ABTB2Q8N961 1025 aa29.91■■■□□ 2.38
MSX2-201ENST00000239243 PANK1Q8TE04 598 aa29.91■■■□□ 2.38
MSX2-201ENST00000239243 AMPHP49418 695 aa29.91■■■□□ 2.38
MSX2-201ENST00000239243 ZKSCAN2Q63HK3 967 aa29.91■■■□□ 2.38
MSX2-201ENST00000239243 SMC4Q9NTJ3 1288 aa29.91■■■□□ 2.38
MSX2-201ENST00000239243 COG6Q9Y2V7 657 aa29.9■■■□□ 2.38
MSX2-201ENST00000239243 CLUAP1Q96AJ1 413 aa29.89■■■□□ 2.38
MSX2-201ENST00000239243 PAK3O75914 559 aaPredicted RBP29.88■■■□□ 2.37
MSX2-201ENST00000239243 ALDH1L2Q3SY69 923 aa29.88■■■□□ 2.37
MSX2-201ENST00000239243 AEBP1Q8IUX7 1158 aa29.87■■■□□ 2.37
MSX2-201ENST00000239243 RBM33Q96EV2 1170 aaKnown RBP29.87■■■□□ 2.37
MSX2-201ENST00000239243 ESCO1Q5FWF5 840 aa29.86■■■□□ 2.37
MSX2-201ENST00000239243 ZNF853P0CG23 659 aa29.86■■■□□ 2.37
MSX2-201ENST00000239243 SSH1Q8WYL5 1049 aa29.86■■■□□ 2.37
MSX2-201ENST00000239243 LAS1LQ9Y4W2 734 aaKnown RBP29.86■■■□□ 2.37
MSX2-201ENST00000239243 KIF16BQ96L93 1317 aa29.85■■■□□ 2.37
MSX2-201ENST00000239243 CFAP44Q96MT7 982 aa29.84■■■□□ 2.37
MSX2-201ENST00000239243 KDRP35968 1356 aa29.84■■■□□ 2.37
MSX2-201ENST00000239243 PSME1Q06323 249 aa29.83■■■□□ 2.37
MSX2-201ENST00000239243 FTSJ3Q8IY81 847 aaKnown RBP29.83■■■□□ 2.37
MSX2-201ENST00000239243 RTL1A6NKG5 1358 aa29.83■■■□□ 2.37
MSX2-201ENST00000239243 DZIP1LQ8IYY4 767 aaKnown RBP29.83■■■□□ 2.37
MSX2-201ENST00000239243 PROSER2Q86WR7 435 aaPredicted RBP29.82■■■□□ 2.36
MSX2-201ENST00000239243 THUMPD2Q9BTF0 503 aaKnown RBP29.82■■■□□ 2.36
MSX2-201ENST00000239243 IGSF1Q8N6C5 1336 aa29.81■■■□□ 2.36
MSX2-201ENST00000239243 IPO8O15397 1037 aaKnown RBP29.81■■■□□ 2.36
MSX2-201ENST00000239243 RLBP1P12271 317 aa29.81■■■□□ 2.36
MSX2-201ENST00000239243 HOXC9P31274 260 aa29.8■■■□□ 2.36
MSX2-201ENST00000239243 NUTM2GQ5VZR2 741 aa29.8■■■□□ 2.36
MSX2-201ENST00000239243 BRPF1P55201 1214 aaPredicted RBP29.79■■■□□ 2.36
MSX2-201ENST00000239243 MVPQ14764 893 aaKnown RBP29.79■■■□□ 2.36
MSX2-201ENST00000239243 ATF7IPQ6VMQ6 1270 aa29.79■■■□□ 2.36
MSX2-201ENST00000239243 MBIPQ9NS73 344 aa29.79■■■□□ 2.36
MSX2-201ENST00000239243 KIF1AQ12756 1690 aa29.77■■■□□ 2.36
MSX2-201ENST00000239243 KCNH5Q8NCM2 988 aa29.76■■■□□ 2.36
MSX2-201ENST00000239243 EYA1Q99502 592 aa29.76■■■□□ 2.35
MSX2-201ENST00000239243 TNNQ9UQP3 1299 aa29.76■■■□□ 2.35
MSX2-201ENST00000239243 FAM83GA6ND36 823 aa29.75■■■□□ 2.35
MSX2-201ENST00000239243 TRIM27P14373 513 aa29.75■■■□□ 2.35
MSX2-201ENST00000239243 C19orf44Q9H6X5 657 aa29.75■■■□□ 2.35
MSX2-201ENST00000239243 NOB1Q9ULX3 412 aaKnown RBP29.75■■■□□ 2.35
MSX2-201ENST00000239243 LTN1O94822 1766 aa29.74■■■□□ 2.35
MSX2-201ENST00000239243 VAMP4O75379 141 aa29.74■■■□□ 2.35
MSX2-201ENST00000239243 NFAT5O94916 1531 aa29.73■■■□□ 2.35
MSX2-201ENST00000239243 NCOA3Q9Y6Q9 1424 aa29.73■■■□□ 2.35
MSX2-201ENST00000239243 HAP1P54257 671 aaPredicted RBP29.72■■■□□ 2.35
MSX2-201ENST00000239243 GAS2L2Q8NHY3 880 aa29.72■■■□□ 2.35
MSX2-201ENST00000239243 DDX19BQ9UMR2 479 aa29.72■■■□□ 2.35
MSX2-201ENST00000239243 DCTN1Q14203 1278 aa29.71■■■□□ 2.35
MSX2-201ENST00000239243 ORAI2Q96SN7 254 aa29.71■■■□□ 2.35
MSX2-201ENST00000239243 TWISTNBQ3B726 338 aaPredicted RBP29.71■■■□□ 2.35
MSX2-201ENST00000239243 PHRF1Q9P1Y6 1649 aaKnown RBP29.71■■■□□ 2.35
MSX2-201ENST00000239243 DCCP43146 1447 aa29.7■■■□□ 2.34
MSX2-201ENST00000239243 C1orf167Q5SNV9 1468 aa29.7■■■□□ 2.34
MSX2-201ENST00000239243 IGHDP01880 384 aa29.69■■■□□ 2.34
MSX2-201ENST00000239243 RTF1Q92541 710 aaKnown RBP29.68■■■□□ 2.34
MSX2-201ENST00000239243 IP6K1Q92551 441 aa29.68■■■□□ 2.34
MSX2-201ENST00000239243 ARHGAP45Q92619 1136 aa29.68■■■□□ 2.34
MSX2-201ENST00000239243 PDE4AP27815 886 aa29.68■■■□□ 2.34
MSX2-201ENST00000239243 FOXO3O43524 673 aa29.67■■■□□ 2.34
MSX2-201ENST00000239243 MTHFSDQ2M296 383 aaKnown RBP29.67■■■□□ 2.34
MSX2-201ENST00000239243 CHL1O00533 1208 aa29.67■■■□□ 2.34
MSX2-201ENST00000239243 TSPYL6Q8N831 410 aa29.67■■■□□ 2.34
MSX2-201ENST00000239243 HTATSF1O43719 755 aaKnown RBP29.66■■■□□ 2.34
MSX2-201ENST00000239243 BACH2Q9BYV9 841 aa29.66■■■□□ 2.34
MSX2-201ENST00000239243 MRPL50Q8N5N7 158 aaKnown RBP29.65■■■□□ 2.34
MSX2-201ENST00000239243 SLIT3O75094 1523 aa29.65■■■□□ 2.34
MSX2-201ENST00000239243 MCM10Q7L590 875 aa29.65■■■□□ 2.34
MSX2-201ENST00000239243 ITPRIPQ8IWB1 547 aa29.65■■■□□ 2.34
MSX2-201ENST00000239243 RWDD1Q9H446 243 aaPredicted RBP29.65■■■□□ 2.34
MSX2-201ENST00000239243 TRPM3Q9HCF6 1732 aaPredicted RBP29.65■■■□□ 2.34
MSX2-201ENST00000239243 KIAA0232Q92628 1395 aa29.64■■■□□ 2.34
MSX2-201ENST00000239243 PCDHB15Q9Y5E8 787 aa29.64■■■□□ 2.33
MSX2-201ENST00000239243 CRB1P82279 1406 aa29.63■■■□□ 2.33
MSX2-201ENST00000239243 TMEM94Q12767 1356 aa29.63■■■□□ 2.33
MSX2-201ENST00000239243 ATF3P18847 181 aa29.63■■■□□ 2.33
MSX2-201ENST00000239243 C8orf58Q8NAV2 365 aa29.63■■■□□ 2.33
MSX2-201ENST00000239243 CHMP4BQ9H444 224 aaKnown RBP29.62■■■□□ 2.33
MSX2-201ENST00000239243 TMEM57Q8N5G2 664 aa29.61■■■□□ 2.33
MSX2-201ENST00000239243 STRCP1A6NGW2 1772 aa29.61■■■□□ 2.33
MSX2-201ENST00000239243 MST1RQ04912 1400 aa29.61■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms