RNA–Protein interactions for RNA: ENST00000231130.3

PCDHB3-201, Transcript of protocadherin beta 3, humanhuman

APPRIS P1 BASIC

Gene PCDHB3, Length 3,355 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3-201ENST00000231130 ZBTB7BO15156 539 aaPredicted RBP17.36■□□□□ 0.37
PCDHB3-201ENST00000231130 TERF1P54274 439 aa17.36■□□□□ 0.37
PCDHB3-201ENST00000231130 IQSEC2Q5JU85 1478 aa17.36■□□□□ 0.37
PCDHB3-201ENST00000231130 TRPM2O94759 1503 aa17.36■□□□□ 0.37
PCDHB3-201ENST00000231130 SYCE3A1L190 88 aa17.36■□□□□ 0.37
PCDHB3-201ENST00000231130 ZSCAN20P17040 1043 aaPredicted RBP17.36■□□□□ 0.37
PCDHB3-201ENST00000231130 SIRT2Q8IXJ6 389 aa17.36■□□□□ 0.37
PCDHB3-201ENST00000231130 C14orf93Q9H972 538 aaKnown RBP17.36■□□□□ 0.37
PCDHB3-201ENST00000231130 DCTN1Q14203 1278 aa17.35■□□□□ 0.37
PCDHB3-201ENST00000231130 ZNF771Q7L3S4 317 aaPredicted RBP17.35■□□□□ 0.37
PCDHB3-201ENST00000231130 PHACTR3Q96KR7 559 aa17.34■□□□□ 0.37
PCDHB3-201ENST00000231130 NOL7Q9UMY1 257 aaKnown RBP17.34■□□□□ 0.37
PCDHB3-201ENST00000231130 GSPT1P15170 499 aaKnown RBP17.34■□□□□ 0.37
PCDHB3-201ENST00000231130 GCC1Q96CN9 775 aa17.34■□□□□ 0.37
PCDHB3-201ENST00000231130 FYB1O15117 783 aa17.34■□□□□ 0.37
PCDHB3-201ENST00000231130 PPIP5K1Q6PFW1 1433 aa17.33■□□□□ 0.36
PCDHB3-201ENST00000231130 ZBTB22O15209 634 aa17.33■□□□□ 0.36
PCDHB3-201ENST00000231130 PTMSP20962 102 aa17.33■□□□□ 0.36
PCDHB3-201ENST00000231130 SPHKAPQ2M3C7 1700 aa17.33■□□□□ 0.36
PCDHB3-201ENST00000231130 ZKSCAN5Q9Y2L8 839 aa17.32■□□□□ 0.36
PCDHB3-201ENST00000231130 NCOA3Q9Y6Q9 1424 aa17.32■□□□□ 0.36
PCDHB3-201ENST00000231130 FAM83GA6ND36 823 aa17.32■□□□□ 0.36
PCDHB3-201ENST00000231130 NSFL1CQ9UNZ2 370 aaKnown RBP17.31■□□□□ 0.36
PCDHB3-201ENST00000231130 PLCB2Q00722 1185 aa17.31■□□□□ 0.36
PCDHB3-201ENST00000231130 UTP14CQ5TAP6 766 aaKnown RBP17.31■□□□□ 0.36
PCDHB3-201ENST00000231130 LMBRD1Q9NUN5 540 aa17.31■□□□□ 0.36
PCDHB3-201ENST00000231130 SHPRHQ149N8 1683 aa17.31■□□□□ 0.36
PCDHB3-201ENST00000231130 ABCA6Q8N139 1617 aa17.3■□□□□ 0.36
PCDHB3-201ENST00000231130 VAMP4O75379 141 aa17.3■□□□□ 0.36
PCDHB3-201ENST00000231130 NUCB2P80303 420 aa17.3■□□□□ 0.36
PCDHB3-201ENST00000231130 TWISTNBQ3B726 338 aaPredicted RBP17.3■□□□□ 0.36
PCDHB3-201ENST00000231130 PAXIP1Q6ZW49 1069 aaPredicted RBP17.3■□□□□ 0.36
PCDHB3-201ENST00000231130 TSHZ3Q63HK5 1081 aa17.29■□□□□ 0.36
PCDHB3-201ENST00000231130 A0A1W2PP64 1363 aa17.29■□□□□ 0.36
PCDHB3-201ENST00000231130 ERCC6L2Q5T890 1561 aa17.29■□□□□ 0.36
PCDHB3-201ENST00000231130 ABCC11Q96J66 1382 aa17.29■□□□□ 0.36
PCDHB3-201ENST00000231130 RABEP1Q15276 862 aa17.29■□□□□ 0.36
PCDHB3-201ENST00000231130 PLEKHM2Q8IWE5 1019 aa17.29■□□□□ 0.36
PCDHB3-201ENST00000231130 GDPD2Q9HCC8 539 aa17.29■□□□□ 0.36
PCDHB3-201ENST00000231130 ZNF500O60304 480 aaPredicted RBP17.29■□□□□ 0.36
PCDHB3-201ENST00000231130 KRT24Q2M2I5 525 aa17.29■□□□□ 0.36
PCDHB3-201ENST00000231130 CABP1Q9NZU7 370 aa17.29■□□□□ 0.36
PCDHB3-201ENST00000231130 MRPL50Q8N5N7 158 aaKnown RBP17.28■□□□□ 0.36
PCDHB3-201ENST00000231130 C8orf58Q8NAV2 365 aa17.28■□□□□ 0.36
PCDHB3-201ENST00000231130 GPT2Q8TD30 523 aa17.28■□□□□ 0.36
PCDHB3-201ENST00000231130 TERF2IPQ9NYB0 399 aa17.28■□□□□ 0.36
PCDHB3-201ENST00000231130 ALDH1L2Q3SY69 923 aa17.28■□□□□ 0.36
PCDHB3-201ENST00000231130 ANKRD36BQ8N2N9 1353 aa17.28■□□□□ 0.36
PCDHB3-201ENST00000231130 ZNF830Q96NB3 372 aaPredicted RBP17.28■□□□□ 0.36
PCDHB3-201ENST00000231130 PRAM1Q96QH2 718 aa17.28■□□□□ 0.36
PCDHB3-201ENST00000231130 ST18O60284 1047 aa17.27■□□□□ 0.36
PCDHB3-201ENST00000231130 MBIPQ9NS73 344 aa17.27■□□□□ 0.36
PCDHB3-201ENST00000231130 CCDC39Q9UFE4 941 aa17.27■□□□□ 0.36
PCDHB3-201ENST00000231130 TMEM63CQ9P1W3 806 aa17.27■□□□□ 0.35
PCDHB3-201ENST00000231130 NEK4P51957 841 aa17.26■□□□□ 0.35
PCDHB3-201ENST00000231130 DTNBO60941 627 aa17.26■□□□□ 0.35
PCDHB3-201ENST00000231130 GTPBP4Q9BZE4 634 aaKnown RBP17.26■□□□□ 0.35
PCDHB3-201ENST00000231130 MAP3K4Q9Y6R4 1608 aa17.26■□□□□ 0.35
PCDHB3-201ENST00000231130 KIAA2012Q0VF49 1180 aa17.26■□□□□ 0.35
PCDHB3-201ENST00000231130 SLC4A10Q6U841 1118 aa17.26■□□□□ 0.35
PCDHB3-201ENST00000231130 EMILIN1Q9Y6C2 1016 aa17.26■□□□□ 0.35
PCDHB3-201ENST00000231130 USP26Q9BXU7 913 aa17.25■□□□□ 0.35
PCDHB3-201ENST00000231130 KIF20AO95235 890 aa17.25■□□□□ 0.35
PCDHB3-201ENST00000231130 SDSP20132 328 aa17.25■□□□□ 0.35
PCDHB3-201ENST00000231130 HDGFL2Q7Z4V5 671 aaPredicted RBP17.25■□□□□ 0.35
PCDHB3-201ENST00000231130 CHMP4AQ9BY43 222 aa17.25■□□□□ 0.35
PCDHB3-201ENST00000231130 SOX12O15370 315 aa17.25■□□□□ 0.35
PCDHB3-201ENST00000231130 ATP2B3Q16720 1220 aa17.25■□□□□ 0.35
PCDHB3-201ENST00000231130 INTS3Q68E01 1043 aaKnown RBP17.25■□□□□ 0.35
PCDHB3-201ENST00000231130 CASC1Q6TDU7 716 aa17.25■□□□□ 0.35
PCDHB3-201ENST00000231130 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.25■□□□□ 0.35
PCDHB3-201ENST00000231130 LETM1O95202 739 aaPredicted RBP17.24■□□□□ 0.35
PCDHB3-201ENST00000231130 TTC22Q5TAA0 569 aa17.24■□□□□ 0.35
PCDHB3-201ENST00000231130 C17orf53Q8N3J3 647 aaPredicted RBP17.23■□□□□ 0.35
PCDHB3-201ENST00000231130 SBNO2Q9Y2G9 1366 aa17.23■□□□□ 0.35
PCDHB3-201ENST00000231130 VGFO15240 615 aaPredicted RBP17.23■□□□□ 0.35
PCDHB3-201ENST00000231130 ZNF445P59923 1031 aa17.23■□□□□ 0.35
PCDHB3-201ENST00000231130 IL16Q14005 1332 aa17.22■□□□□ 0.35
PCDHB3-201ENST00000231130 FCHSD2O94868 740 aa17.22■□□□□ 0.35
PCDHB3-201ENST00000231130 HS1BP3Q53T59 392 aa17.22■□□□□ 0.35
PCDHB3-201ENST00000231130 TMEM51Q9NW97 253 aa17.22■□□□□ 0.35
PCDHB3-201ENST00000231130 ZRANB1Q9UGI0 708 aa17.22■□□□□ 0.35
PCDHB3-201ENST00000231130 ABCC1P33527 1531 aa17.22■□□□□ 0.35
PCDHB3-201ENST00000231130 GNAI1P63096 354 aa17.22■□□□□ 0.35
PCDHB3-201ENST00000231130 PDCL2Q8N4E4 241 aa17.22■□□□□ 0.35
PCDHB3-201ENST00000231130 ZDHHC9Q9Y397 364 aa17.22■□□□□ 0.35
PCDHB3-201ENST00000231130 RRS1Q15050 365 aaKnown RBP17.21■□□□□ 0.35
PCDHB3-201ENST00000231130 KIF3AQ9Y496 699 aa17.21■□□□□ 0.35
PCDHB3-201ENST00000231130 NFE2L2Q16236 605 aa17.21■□□□□ 0.35
PCDHB3-201ENST00000231130 RILPL2Q969X0 211 aa17.2■□□□□ 0.34
PCDHB3-201ENST00000231130 LARP6Q9BRS8 491 aaKnown RBP17.2■□□□□ 0.34
PCDHB3-201ENST00000231130 UPF3BQ9BZI7 483 aaKnown RBP17.2■□□□□ 0.34
PCDHB3-201ENST00000231130 IPO4Q8TEX9 1081 aaKnown RBP17.2■□□□□ 0.34
PCDHB3-201ENST00000231130 CDK19Q9BWU1 502 aa17.2■□□□□ 0.34
PCDHB3-201ENST00000231130 MIS18AQ9NYP9 233 aa17.2■□□□□ 0.34
PCDHB3-201ENST00000231130 TRIM6-TRIM34B2RNG4 842 aa17.19■□□□□ 0.34
PCDHB3-201ENST00000231130 U2AF2P26368 475 aaKnown RBP eCLIP17.19■□□□□ 0.34
PCDHB3-201ENST00000231130 KCNJ4P48050 445 aa17.19■□□□□ 0.34
PCDHB3-201ENST00000231130 MYRIPQ8NFW9 859 aa17.19■□□□□ 0.34
PCDHB3-201ENST00000231130 API5Q9BZZ5 524 aaKnown RBP17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms