RNA–Protein interactions for RNA: ENST00000229268.12

USP5-201, Transcript of ubiquitin specific peptidase 5, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene USP5, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP5-201ENST00000229268 CCDC27Q2M243 656 aa17.24■□□□□ 0.35
USP5-201ENST00000229268 FTSJ3Q8IY81 847 aaKnown RBP17.24■□□□□ 0.35
USP5-201ENST00000229268 NPM2Q86SE8 214 aaKnown RBP17.24■□□□□ 0.35
USP5-201ENST00000229268 SSH1Q8WYL5 1049 aa17.24■□□□□ 0.35
USP5-201ENST00000229268 MSH5O43196 834 aa17.22■□□□□ 0.35
USP5-201ENST00000229268 TSPYL6Q8N831 410 aa17.22■□□□□ 0.35
USP5-201ENST00000229268 NPHP4O75161 1426 aaPredicted RBP17.22■□□□□ 0.35
USP5-201ENST00000229268 KRT24Q2M2I5 525 aa17.22■□□□□ 0.35
USP5-201ENST00000229268 IQSEC2Q5JU85 1478 aa17.21■□□□□ 0.35
USP5-201ENST00000229268 PTCH1Q13635 1447 aa17.21■□□□□ 0.35
USP5-201ENST00000229268 DIP2AQ14689 1571 aa17.2■□□□□ 0.34
USP5-201ENST00000229268 KIF20BQ96Q89 1820 aa17.2■□□□□ 0.34
USP5-201ENST00000229268 RGPD8O14715 1765 aaPredicted RBP17.2■□□□□ 0.34
USP5-201ENST00000229268 SETD1BQ9UPS6 1966 aaKnown RBP17.2■□□□□ 0.34
USP5-201ENST00000229268 EYA1Q99502 592 aa17.19■□□□□ 0.34
USP5-201ENST00000229268 NOB1Q9ULX3 412 aaKnown RBP17.19■□□□□ 0.34
USP5-201ENST00000229268 AATKQ6ZMQ8 1374 aa17.18■□□□□ 0.34
USP5-201ENST00000229268 ITPRIPQ8IWB1 547 aa17.18■□□□□ 0.34
USP5-201ENST00000229268 TTC21AQ8NDW8 1320 aa17.18■□□□□ 0.34
USP5-201ENST00000229268 LRRC7Q96NW7 1537 aa17.18■□□□□ 0.34
USP5-201ENST00000229268 MBIPQ9NS73 344 aa17.18■□□□□ 0.34
USP5-201ENST00000229268 KNDC1Q76NI1 1749 aa17.17■□□□□ 0.34
USP5-201ENST00000229268 ZC3H6P61129 1189 aaKnown RBP17.17■□□□□ 0.34
USP5-201ENST00000229268 IGHDP01880 384 aa17.16■□□□□ 0.34
USP5-201ENST00000229268 ATF3P18847 181 aa17.16■□□□□ 0.34
USP5-201ENST00000229268 ZKSCAN2Q63HK3 967 aa17.16■□□□□ 0.34
USP5-201ENST00000229268 C8orf58Q8NAV2 365 aa17.15■□□□□ 0.34
USP5-201ENST00000229268 HOXC9P31274 260 aa17.15■□□□□ 0.34
USP5-201ENST00000229268 MTHFSDQ2M296 383 aaKnown RBP17.15■□□□□ 0.34
USP5-201ENST00000229268 CABLES1Q8TDN4 633 aa17.15■□□□□ 0.34
USP5-201ENST00000229268 NECTIN2Q92692 538 aa17.15■□□□□ 0.34
USP5-201ENST00000229268 LRRC59Q96AG4 307 aaKnown RBP17.15■□□□□ 0.34
USP5-201ENST00000229268 OVOS2A0A0J9YW53 1432 aa17.15■□□□□ 0.34
USP5-201ENST00000229268 OVOS2Q6IE36 1432 aa17.15■□□□□ 0.34
USP5-201ENST00000229268 TRIM27P14373 513 aa17.14■□□□□ 0.33
USP5-201ENST00000229268 DZIP1LQ8IYY4 767 aaKnown RBP17.14■□□□□ 0.33
USP5-201ENST00000229268 RTF1Q92541 710 aaKnown RBP17.14■□□□□ 0.33
USP5-201ENST00000229268 ITSN1Q15811 1721 aa17.14■□□□□ 0.33
USP5-201ENST00000229268 PIK3R4Q99570 1358 aa17.14■□□□□ 0.33
USP5-201ENST00000229268 PDE3AQ14432 1141 aa17.14■□□□□ 0.33
USP5-201ENST00000229268 CDK12Q9NYV4 1490 aaPredicted RBP17.13■□□□□ 0.33
USP5-201ENST00000229268 ADAMTSL3P82987 1691 aa17.13■□□□□ 0.33
USP5-201ENST00000229268 GNAI1P63096 354 aa17.13■□□□□ 0.33
USP5-201ENST00000229268 KRT28Q7Z3Y7 464 aa17.13■□□□□ 0.33
USP5-201ENST00000229268 TWISTNBQ3B726 338 aaPredicted RBP17.12■□□□□ 0.33
USP5-201ENST00000229268 C19orf44Q9H6X5 657 aa17.12■□□□□ 0.33
USP5-201ENST00000229268 PCDHB15Q9Y5E8 787 aa17.12■□□□□ 0.33
USP5-201ENST00000229268 ANKRD26Q9UPS8 1709 aa17.11■□□□□ 0.33
USP5-201ENST00000229268 FLT4P35916 1363 aa17.11■□□□□ 0.33
USP5-201ENST00000229268 LMOD3Q0VAK6 560 aa17.1■□□□□ 0.33
USP5-201ENST00000229268 TMEM57Q8N5G2 664 aa17.1■□□□□ 0.33
USP5-201ENST00000229268 SSH2Q76I76 1423 aa17.1■□□□□ 0.33
USP5-201ENST00000229268 TMEM94Q12767 1356 aa17.1■□□□□ 0.33
USP5-201ENST00000229268 CALD1Q05682 793 aaKnown RBP17.1■□□□□ 0.33
USP5-201ENST00000229268 ATF7IPQ6VMQ6 1270 aa17.1■□□□□ 0.33
USP5-201ENST00000229268 CENPQQ7L2Z9 268 aaPredicted RBP17.1■□□□□ 0.33
USP5-201ENST00000229268 MON2Q7Z3U7 1717 aa17.09■□□□□ 0.33
USP5-201ENST00000229268 GCP02774 474 aa17.09■□□□□ 0.33
USP5-201ENST00000229268 VAMP4O75379 141 aa17.09■□□□□ 0.33
USP5-201ENST00000229268 CFAP44Q96MT7 982 aa17.09■□□□□ 0.33
USP5-201ENST00000229268 C1orf115Q9H7X2 142 aa17.09■□□□□ 0.33
USP5-201ENST00000229268 SBNO1A3KN83 1393 aa17.08■□□□□ 0.33
USP5-201ENST00000229268 ADGRB2O60241 1585 aa17.08■□□□□ 0.33
USP5-201ENST00000229268 KDM4FA0A1W2PPD8 638 aa17.08■□□□□ 0.33
USP5-201ENST00000229268 USP31Q70CQ4 1352 aa17.08■□□□□ 0.32
USP5-201ENST00000229268 IL16Q14005 1332 aa17.08■□□□□ 0.32
USP5-201ENST00000229268 IFT57Q9NWB7 429 aa17.08■□□□□ 0.32
USP5-201ENST00000229268 ADGRL3Q9HAR2 1447 aa17.08■□□□□ 0.32
USP5-201ENST00000229268 PDE4AP27815 886 aa17.08■□□□□ 0.32
USP5-201ENST00000229268 NBPF6Q5VWK0 638 aa17.08■□□□□ 0.32
USP5-201ENST00000229268 NBPF4Q96M43 638 aa17.08■□□□□ 0.32
USP5-201ENST00000229268 TSPYL4Q9UJ04 414 aa17.07■□□□□ 0.32
USP5-201ENST00000229268 AKAP12Q02952 1782 aa17.07■□□□□ 0.32
USP5-201ENST00000229268 MVPQ14764 893 aaKnown RBP17.07■□□□□ 0.32
USP5-201ENST00000229268 XRN1Q8IZH2 1706 aaKnown RBP17.06■□□□□ 0.32
USP5-201ENST00000229268 CHRNA2Q15822 529 aa17.06■□□□□ 0.32
USP5-201ENST00000229268 ANKARQ7Z5J8 1434 aa17.06■□□□□ 0.32
USP5-201ENST00000229268 KDM2BQ8NHM5 1336 aa17.05■□□□□ 0.32
USP5-201ENST00000229268 IPO8O15397 1037 aaKnown RBP17.04■□□□□ 0.32
USP5-201ENST00000229268 AXIN2Q9Y2T1 843 aa17.04■□□□□ 0.32
USP5-201ENST00000229268 ZNF335Q9H4Z2 1342 aaPredicted RBP17.03■□□□□ 0.32
USP5-201ENST00000229268 CSB-PGBD3P0DP91 1061 aa17.02■□□□□ 0.32
USP5-201ENST00000229268 NALCNQ8IZF0 1738 aa17.02■□□□□ 0.32
USP5-201ENST00000229268 ZNF853P0CG23 659 aa17.02■□□□□ 0.31
USP5-201ENST00000229268 IP6K1Q92551 441 aa17.02■□□□□ 0.31
USP5-201ENST00000229268 PEAK1Q9H792 1746 aa17.02■□□□□ 0.31
USP5-201ENST00000229268 SLC4A10Q6U841 1118 aa17.01■□□□□ 0.31
USP5-201ENST00000229268 NLRP2Q9NX02 1062 aa17.01■□□□□ 0.31
USP5-201ENST00000229268 IGSF1Q8N6C5 1336 aa17.01■□□□□ 0.31
USP5-201ENST00000229268 CHD2O14647 1828 aaKnown RBP17.01■□□□□ 0.31
USP5-201ENST00000229268 TOPAZ1Q8N9V7 1692 aa17.01■□□□□ 0.31
USP5-201ENST00000229268 CT47B1P0C2W7 299 aaPredicted RBP17.01■□□□□ 0.31
USP5-201ENST00000229268 HAP1P54257 671 aaPredicted RBP17.01■□□□□ 0.31
USP5-201ENST00000229268 MPRIPQ6WCQ1 1025 aa17.01■□□□□ 0.31
USP5-201ENST00000229268 ERICH6Q7L0X2 663 aa17.01■□□□□ 0.31
USP5-201ENST00000229268 KCNH5Q8NCM2 988 aa17.01■□□□□ 0.31
USP5-201ENST00000229268 GAS2L2Q8NHY3 880 aa17.01■□□□□ 0.31
USP5-201ENST00000229268 KIF16BQ96L93 1317 aa17.01■□□□□ 0.31
USP5-201ENST00000229268 GNAT3A8MTJ3 354 aa17■□□□□ 0.31
USP5-201ENST00000229268 NCBP3Q53F19 620 aaKnown RBP17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms