RNA–Protein interactions for RNA: ENST00000217315.9

TM9SF4-201, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 2 BASIC

Gene TM9SF4, Length 4,032 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-201ENST00000217315 HDAC1Q13547 482 aaPredicted RBP15.17■□□□□ 0.02
TM9SF4-201ENST00000217315 TAOK2Q9UL54 1235 aa15.17■□□□□ 0.02
TM9SF4-201ENST00000217315 ACEP12821 1306 aa15.16■□□□□ 0.02
TM9SF4-201ENST00000217315 ESCO1Q5FWF5 840 aa15.16■□□□□ 0.02
TM9SF4-201ENST00000217315 C8orf58Q8NAV2 365 aa15.16■□□□□ 0.02
TM9SF4-201ENST00000217315 RIMS2Q9UQ26 1411 aa15.16■□□□□ 0.02
TM9SF4-201ENST00000217315 GNAI3P08754 354 aa15.16■□□□□ 0.02
TM9SF4-201ENST00000217315 F6X3S4 739 aa15.15■□□□□ 0.02
TM9SF4-201ENST00000217315 GNAI2P04899 355 aa15.15■□□□□ 0.02
TM9SF4-201ENST00000217315 HDGFL1Q5TGJ6 251 aa15.15■□□□□ 0.02
TM9SF4-201ENST00000217315 RBM33Q96EV2 1170 aaKnown RBP15.15■□□□□ 0.02
TM9SF4-201ENST00000217315 SYNMO15061 1565 aa15.15■□□□□ 0.02
TM9SF4-201ENST00000217315 SMARCA5O60264 1052 aaPredicted RBP15.15■□□□□ 0.02
TM9SF4-201ENST00000217315 MCM4P33991 863 aa15.15■□□□□ 0.02
TM9SF4-201ENST00000217315 HDAC5Q9UQL6 1122 aa15.15■□□□□ 0.02
TM9SF4-201ENST00000217315 PPIP5K1Q6PFW1 1433 aa15.15■□□□□ 0.02
TM9SF4-201ENST00000217315 GPATCH3Q96I76 525 aa15.14■□□□□ 0.01
TM9SF4-201ENST00000217315 CHMP3Q9Y3E7 222 aa15.14■□□□□ 0.01
TM9SF4-201ENST00000217315 SURF6O75683 361 aaKnown RBP15.14■□□□□ 0.01
TM9SF4-201ENST00000217315 YEATS2Q9ULM3 1422 aa15.14■□□□□ 0.01
TM9SF4-201ENST00000217315 CLTCL1P53675 1640 aa15.14■□□□□ 0.01
TM9SF4-201ENST00000217315 VAMP4O75379 141 aa15.14■□□□□ 0.01
TM9SF4-201ENST00000217315 SKOR2Q2VWA4 1001 aaPredicted RBP15.14■□□□□ 0.01
TM9SF4-201ENST00000217315 RSPH6AQ9H0K4 717 aa15.14■□□□□ 0.01
TM9SF4-201ENST00000217315 EXOC6BQ9Y2D4 811 aa15.14■□□□□ 0.01
TM9SF4-201ENST00000217315 MYOM2P54296 1465 aa15.14■□□□□ 0.01
TM9SF4-201ENST00000217315 RPAP2Q8IXW5 612 aaPredicted RBP15.14■□□□□ 0.01
TM9SF4-201ENST00000217315 KRT24Q2M2I5 525 aa15.13■□□□□ 0.01
TM9SF4-201ENST00000217315 ZBTB40Q9NUA8 1239 aa15.13■□□□□ 0.01
TM9SF4-201ENST00000217315 MSNP26038 577 aaKnown RBP15.13■□□□□ 0.01
TM9SF4-201ENST00000217315 CCT4P50991 539 aaKnown RBP15.13■□□□□ 0.01
TM9SF4-201ENST00000217315 DNTTIP2Q5QJE6 756 aaKnown RBP15.13■□□□□ 0.01
TM9SF4-201ENST00000217315 GOLGA6L4A6NEF3 574 aa15.12■□□□□ 0.01
TM9SF4-201ENST00000217315 MCTP1Q6DN14 999 aa15.12■□□□□ 0.01
TM9SF4-201ENST00000217315 NEK4P51957 841 aa15.12■□□□□ 0.01
TM9SF4-201ENST00000217315 AIMP1Q12904 312 aaKnown RBP15.12■□□□□ 0.01
TM9SF4-201ENST00000217315 NUCB1Q02818 461 aa15.11■□□□□ 0.01
TM9SF4-201ENST00000217315 CCDC9Q9Y3X0 531 aaKnown RBP15.11■□□□□ 0.01
TM9SF4-201ENST00000217315 TTC21BQ7Z4L5 1316 aa15.11■□□□□ 0.01
TM9SF4-201ENST00000217315 K7ELQ4 463 aaPredicted RBP15.11■□□□□ 0.01
TM9SF4-201ENST00000217315 MRPL50Q8N5N7 158 aaKnown RBP15.11■□□□□ 0.01
TM9SF4-201ENST00000217315 DIAPH3Q9NSV4 1193 aa15.11■□□□□ 0.01
TM9SF4-201ENST00000217315 XPCQ01831 940 aaPredicted RBP15.11■□□□□ 0.01
TM9SF4-201ENST00000217315 EIF4A2Q14240 407 aaKnown RBP15.11■□□□□ 0.01
TM9SF4-201ENST00000217315 RABEP1Q15276 862 aa15.11■□□□□ 0.01
TM9SF4-201ENST00000217315 USHBP1Q8N6Y0 703 aa15.11■□□□□ 0.01
TM9SF4-201ENST00000217315 NUCB2P80303 420 aa15.1■□□□□ 0.01
TM9SF4-201ENST00000217315 TET3O43151 1660 aa15.1■□□□□ 0.01
TM9SF4-201ENST00000217315 BMP2KLQ5H9B9 411 aa15.1■□□□□ 0.01
TM9SF4-201ENST00000217315 SMC5Q8IY18 1101 aa15.1■□□□□ 0.01
TM9SF4-201ENST00000217315 TNRQ92752 1358 aa15.09■□□□□ 0.01
TM9SF4-201ENST00000217315 TBC1D9Q6ZT07 1266 aa15.09■□□□□ 0.01
TM9SF4-201ENST00000217315 ARHGAP45Q92619 1136 aa15.09■□□□□ 0.01
TM9SF4-201ENST00000217315 IL1RAPL2Q9NP60 686 aa15.09■□□□□ 0.01
TM9SF4-201ENST00000217315 LRRCC1Q9C099 1032 aa15.09■□□□□ 0.01
TM9SF4-201ENST00000217315 NLRP2Q9NX02 1062 aa15.09■□□□□ 0.01
TM9SF4-201ENST00000217315 GNAT3A8MTJ3 354 aa15.08■□□□□ 0.01
TM9SF4-201ENST00000217315 IFIT2P09913 472 aaKnown RBP15.08■□□□□ 0.01
TM9SF4-201ENST00000217315 MLH3Q9UHC1 1453 aa15.08■□□□□ 0
TM9SF4-201ENST00000217315 ZNF530Q6P9A1 599 aaPredicted RBP15.08■□□□□ 0
TM9SF4-201ENST00000217315 POLR1AO95602 1720 aaPredicted RBP15.07■□□□□ 0
TM9SF4-201ENST00000217315 E9PCH4 1651 aa15.07■□□□□ 0
TM9SF4-201ENST00000217315 NEXNQ0ZGT2 675 aa15.07■□□□□ 0
TM9SF4-201ENST00000217315 KIF1BO60333 1816 aa15.07■□□□□ 0
TM9SF4-201ENST00000217315 ERC2O15083 957 aa15.07■□□□□ 0
TM9SF4-201ENST00000217315 RAPGEF4Q8WZA2 1011 aa15.07■□□□□ 0
TM9SF4-201ENST00000217315 MEIS3Q99687 375 aa15.07■□□□□ 0
TM9SF4-201ENST00000217315 MADDQ8WXG6 1647 aa15.07■□□□□ 0
TM9SF4-201ENST00000217315 SYAP1Q96A49 352 aaPredicted RBP15.07■□□□□ 0
TM9SF4-201ENST00000217315 EFCAB6Q5THR3 1501 aa15.06■□□□□ 0
TM9SF4-201ENST00000217315 NEO1Q92859 1461 aa15.06■□□□□ 0
TM9SF4-201ENST00000217315 IL13P35225 146 aa15.06■□□□□ 0
TM9SF4-201ENST00000217315 ZMYM3Q14202 1370 aa15.06■□□□□ 0
TM9SF4-201ENST00000217315 SRCIN1Q9C0H9 1055 aa15.06■□□□□ 0
TM9SF4-201ENST00000217315 ZFYVE9O95405 1425 aa15.06■□□□□ 0
TM9SF4-201ENST00000217315 FOXO3O43524 673 aa15.05■□□□□ 0
TM9SF4-201ENST00000217315 MRE11P49959 708 aa15.05■□□□□ 0
TM9SF4-201ENST00000217315 PLEKHO1Q53GL0 409 aaPredicted RBP15.05■□□□□ 0
TM9SF4-201ENST00000217315 SHROOM2Q13796 1616 aa15.05■□□□□ 0
TM9SF4-201ENST00000217315 DDX58O95786 925 aaKnown RBP15.05■□□□□ -0
TM9SF4-201ENST00000217315 MAP4K4O95819 1239 aaPredicted RBP15.05■□□□□ -0
TM9SF4-201ENST00000217315 PLEKHF1Q96S99 279 aa15.05■□□□□ -0
TM9SF4-201ENST00000217315 MAP3K4Q9Y6R4 1608 aa15.05■□□□□ -0
TM9SF4-201ENST00000217315 SPHKAPQ2M3C7 1700 aa15.05■□□□□ -0
TM9SF4-201ENST00000217315 TTC5Q8N0Z6 440 aa15.05■□□□□ -0
TM9SF4-201ENST00000217315 ARAP3Q8WWN8 1544 aa15.05■□□□□ -0
TM9SF4-201ENST00000217315 ZBTB7BO15156 539 aaPredicted RBP15.04■□□□□ -0
TM9SF4-201ENST00000217315 G3BP1Q13283 466 aaKnown RBP eCLIP15.04■□□□□ -0
TM9SF4-201ENST00000217315 HSP90AB4PQ58FF6 505 aa15.04■□□□□ -0
TM9SF4-201ENST00000217315 CLASRPQ8N2M8 674 aaKnown RBP15.04■□□□□ -0
TM9SF4-201ENST00000217315 SRGAP3O43295 1099 aa15.04■□□□□ -0
TM9SF4-201ENST00000217315 RIC3Q7Z5B4 369 aa15.04■□□□□ -0
TM9SF4-201ENST00000217315 ANKLE2Q86XL3 938 aa15.04■□□□□ -0
TM9SF4-201ENST00000217315 C16orf71Q8IYS4 520 aaPredicted RBP15.04■□□□□ -0
TM9SF4-201ENST00000217315 RUFY2Q8WXA3 655 aa15.04■□□□□ -0
TM9SF4-201ENST00000217315 FLIIQ13045 1269 aa15.03■□□□□ -0
TM9SF4-201ENST00000217315 TSHZ3Q63HK5 1081 aa15.03■□□□□ -0
TM9SF4-201ENST00000217315 CAVIN1Q6NZI2 390 aaKnown RBP15.03■□□□□ -0
TM9SF4-201ENST00000217315 TAF7Q15545 349 aaPredicted RBP15.02■□□□□ -0
TM9SF4-201ENST00000217315 ZRSR1Q15695 479 aaKnown RBP15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 425.5 ms