RNA–Protein interactions for RNA: ENST00000162749.6

TNFRSF1A-201, Transcript of TNF receptor superfamily member 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1A, Length 2,223 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-201ENST00000162749 HMOX1P09601 288 aa25.83■■□□□ 1.72
TNFRSF1A-201ENST00000162749 EIF4A2Q14240 407 aaKnown RBP25.83■■□□□ 1.72
TNFRSF1A-201ENST00000162749 RCAN3Q9UKA8 241 aa25.82■■□□□ 1.72
TNFRSF1A-201ENST00000162749 PRKAR2BP31323 418 aa25.82■■□□□ 1.72
TNFRSF1A-201ENST00000162749 TMPOP42166 694 aaKnown RBP25.81■■□□□ 1.72
TNFRSF1A-201ENST00000162749 NFAT5O94916 1531 aa25.8■■□□□ 1.72
TNFRSF1A-201ENST00000162749 E9PSI1 815 aa25.8■■□□□ 1.72
TNFRSF1A-201ENST00000162749 ALS2Q96Q42 1657 aa25.8■■□□□ 1.72
TNFRSF1A-201ENST00000162749 KIF24Q5T7B8 1368 aa25.79■■□□□ 1.72
TNFRSF1A-201ENST00000162749 KRT28Q7Z3Y7 464 aa25.79■■□□□ 1.72
TNFRSF1A-201ENST00000162749 DLG5Q8TDM6 1919 aa25.78■■□□□ 1.72
TNFRSF1A-201ENST00000162749 AMPHP49418 695 aa25.77■■□□□ 1.72
TNFRSF1A-201ENST00000162749 WDR63Q8IWG1 891 aa25.77■■□□□ 1.72
TNFRSF1A-201ENST00000162749 PHACTR3Q96KR7 559 aa25.75■■□□□ 1.71
TNFRSF1A-201ENST00000162749 SLIT3O75094 1523 aa25.75■■□□□ 1.71
TNFRSF1A-201ENST00000162749 PHRF1Q9P1Y6 1649 aaKnown RBP25.75■■□□□ 1.71
TNFRSF1A-201ENST00000162749 TRIM35Q9UPQ4 493 aa25.75■■□□□ 1.71
TNFRSF1A-201ENST00000162749 NEFMP07197 916 aa25.74■■□□□ 1.71
TNFRSF1A-201ENST00000162749 HOXC9P31274 260 aa25.73■■□□□ 1.71
TNFRSF1A-201ENST00000162749 RIPK4P57078 832 aa25.73■■□□□ 1.71
TNFRSF1A-201ENST00000162749 ERICH6BQ5W0A0 696 aa25.73■■□□□ 1.71
TNFRSF1A-201ENST00000162749 DDX17Q92841 729 aaKnown RBP25.73■■□□□ 1.71
TNFRSF1A-201ENST00000162749 AEBP1Q8IUX7 1158 aa25.72■■□□□ 1.71
TNFRSF1A-201ENST00000162749 KCNH5Q8NCM2 988 aa25.72■■□□□ 1.71
TNFRSF1A-201ENST00000162749 RTL1A6NKG5 1358 aa25.72■■□□□ 1.71
TNFRSF1A-201ENST00000162749 NPHP3Q7Z494 1330 aa25.71■■□□□ 1.71
TNFRSF1A-201ENST00000162749 SULT6B1Q6IMI4 303 aa25.71■■□□□ 1.71
TNFRSF1A-201ENST00000162749 LMOD2Q6P5Q4 547 aa25.71■■□□□ 1.71
TNFRSF1A-201ENST00000162749 RRP1P56182 461 aaKnown RBP25.71■■□□□ 1.71
TNFRSF1A-201ENST00000162749 ARHGEF10O15013 1369 aa25.7■■□□□ 1.7
TNFRSF1A-201ENST00000162749 USP19O94966 1318 aa25.7■■□□□ 1.7
TNFRSF1A-201ENST00000162749 PXDNQ92626 1479 aa25.69■■□□□ 1.7
TNFRSF1A-201ENST00000162749 NFE2L2Q16236 605 aa25.68■■□□□ 1.7
TNFRSF1A-201ENST00000162749 BRINP3Q76B58 766 aa25.68■■□□□ 1.7
TNFRSF1A-201ENST00000162749 GCP02774 474 aa25.68■■□□□ 1.7
TNFRSF1A-201ENST00000162749 KDRP35968 1356 aa25.67■■□□□ 1.7
TNFRSF1A-201ENST00000162749 MED1Q15648 1581 aaPredicted RBP25.67■■□□□ 1.7
TNFRSF1A-201ENST00000162749 IGSF1Q8N6C5 1336 aa25.66■■□□□ 1.7
TNFRSF1A-201ENST00000162749 SLAIN2Q9P270 581 aa25.66■■□□□ 1.7
TNFRSF1A-201ENST00000162749 IP6K1Q92551 441 aa25.65■■□□□ 1.7
TNFRSF1A-201ENST00000162749 EYA1Q99502 592 aa25.65■■□□□ 1.7
TNFRSF1A-201ENST00000162749 TNS3Q68CZ2 1445 aa25.64■■□□□ 1.7
TNFRSF1A-201ENST00000162749 MYH16Q9H6N6 1097 aa25.63■■□□□ 1.69
TNFRSF1A-201ENST00000162749 PPP4R2Q9NY27 417 aa25.63■■□□□ 1.69
TNFRSF1A-201ENST00000162749 PLEKHG5O94827 1062 aa25.63■■□□□ 1.69
TNFRSF1A-201ENST00000162749 CRYBG1Q9Y4K1 1723 aa25.62■■□□□ 1.69
TNFRSF1A-201ENST00000162749 IL16Q14005 1332 aa25.62■■□□□ 1.69
TNFRSF1A-201ENST00000162749 RGPD2P0DJD1 1756 aa25.62■■□□□ 1.69
TNFRSF1A-201ENST00000162749 ARHGEF25Q86VW2 580 aa25.62■■□□□ 1.69
TNFRSF1A-201ENST00000162749 RGPD5Q99666 1765 aa25.61■■□□□ 1.69
TNFRSF1A-201ENST00000162749 LTV1Q96GA3 475 aaPredicted RBP25.59■■□□□ 1.69
TNFRSF1A-201ENST00000162749 SPATA31A3Q5VYP0 1347 aa25.59■■□□□ 1.69
TNFRSF1A-201ENST00000162749 FANCIQ9NVI1 1328 aa25.59■■□□□ 1.69
TNFRSF1A-201ENST00000162749 ZBTB7CA1YPR0 619 aa25.58■■□□□ 1.69
TNFRSF1A-201ENST00000162749 PLIN1O60240 522 aa25.58■■□□□ 1.69
TNFRSF1A-201ENST00000162749 TSR2Q969E8 191 aaKnown RBP25.57■■□□□ 1.68
TNFRSF1A-201ENST00000162749 NHSL1Q5SYE7 1610 aa25.56■■□□□ 1.68
TNFRSF1A-201ENST00000162749 LMOD3Q0VAK6 560 aa25.55■■□□□ 1.68
TNFRSF1A-201ENST00000162749 THUMPD2Q9BTF0 503 aaKnown RBP25.55■■□□□ 1.68
TNFRSF1A-201ENST00000162749 LTBP4Q8N2S1 1624 aa25.55■■□□□ 1.68
TNFRSF1A-201ENST00000162749 SOS2Q07890 1332 aaPredicted RBP25.55■■□□□ 1.68
TNFRSF1A-201ENST00000162749 FAM83GA6ND36 823 aa25.53■■□□□ 1.68
TNFRSF1A-201ENST00000162749 BCAR3O75815 825 aa25.52■■□□□ 1.68
TNFRSF1A-201ENST00000162749 ZC3H6P61129 1189 aaKnown RBP25.52■■□□□ 1.68
TNFRSF1A-201ENST00000162749 CALD1Q05682 793 aaKnown RBP25.52■■□□□ 1.68
TNFRSF1A-201ENST00000162749 COL18A1P39060 1754 aa25.52■■□□□ 1.68
TNFRSF1A-201ENST00000162749 CABLES1Q8TDN4 633 aa25.51■■□□□ 1.67
TNFRSF1A-201ENST00000162749 NBPF6Q5VWK0 638 aa25.51■■□□□ 1.67
TNFRSF1A-201ENST00000162749 NBPF4Q96M43 638 aa25.51■■□□□ 1.67
TNFRSF1A-201ENST00000162749 AXIN2Q9Y2T1 843 aa25.51■■□□□ 1.67
TNFRSF1A-201ENST00000162749 MTHFSDQ2M296 383 aaKnown RBP25.5■■□□□ 1.67
TNFRSF1A-201ENST00000162749 CAMTA1Q9Y6Y1 1673 aa25.5■■□□□ 1.67
TNFRSF1A-201ENST00000162749 DCTN1Q14203 1278 aa25.49■■□□□ 1.67
TNFRSF1A-201ENST00000162749 USHBP1Q8N6Y0 703 aa25.49■■□□□ 1.67
TNFRSF1A-201ENST00000162749 EXOSC9Q06265 439 aaKnown RBP25.49■■□□□ 1.67
TNFRSF1A-201ENST00000162749 B4GALNT3Q6L9W6 998 aa25.49■■□□□ 1.67
TNFRSF1A-201ENST00000162749 RARSP54136 660 aaKnown RBP25.48■■□□□ 1.67
TNFRSF1A-201ENST00000162749 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.48■■□□□ 1.67
TNFRSF1A-201ENST00000162749 IFT57Q9NWB7 429 aa25.48■■□□□ 1.67
TNFRSF1A-201ENST00000162749 CT47B1P0C2W7 299 aaPredicted RBP25.47■■□□□ 1.67
TNFRSF1A-201ENST00000162749 LRRC59Q96AG4 307 aaKnown RBP25.47■■□□□ 1.67
TNFRSF1A-201ENST00000162749 RBM19Q9Y4C8 960 aaKnown RBP25.47■■□□□ 1.67
TNFRSF1A-201ENST00000162749 ABCA3Q99758 1704 aa25.47■■□□□ 1.67
TNFRSF1A-201ENST00000162749 NCAPD2Q15021 1401 aa25.47■■□□□ 1.67
TNFRSF1A-201ENST00000162749 ZNF853P0CG23 659 aa25.47■■□□□ 1.67
TNFRSF1A-201ENST00000162749 C20orf194Q5TEA3 1177 aa25.47■■□□□ 1.67
TNFRSF1A-201ENST00000162749 EXOC6Q8TAG9 804 aa25.47■■□□□ 1.67
TNFRSF1A-201ENST00000162749 GNAI1P63096 354 aa25.46■■□□□ 1.67
TNFRSF1A-201ENST00000162749 GAS2L2Q8NHY3 880 aa25.46■■□□□ 1.67
TNFRSF1A-201ENST00000162749 ANKRD24Q8TF21 1146 aa25.46■■□□□ 1.67
TNFRSF1A-201ENST00000162749 LAS1LQ9Y4W2 734 aaKnown RBP25.46■■□□□ 1.67
TNFRSF1A-201ENST00000162749 ROBO1Q9Y6N7 1651 aa25.45■■□□□ 1.66
TNFRSF1A-201ENST00000162749 CFAP44Q96MT7 982 aa25.45■■□□□ 1.66
TNFRSF1A-201ENST00000162749 ERBB3P21860 1342 aa25.45■■□□□ 1.66
TNFRSF1A-201ENST00000162749 ABCC6O95255 1503 aa25.44■■□□□ 1.66
TNFRSF1A-201ENST00000162749 MCM10Q7L590 875 aa25.44■■□□□ 1.66
TNFRSF1A-201ENST00000162749 CPDO75976 1380 aa25.43■■□□□ 1.66
TNFRSF1A-201ENST00000162749 LMO7Q8WWI1 1683 aa25.43■■□□□ 1.66
TNFRSF1A-201ENST00000162749 MBIPQ9NS73 344 aa25.43■■□□□ 1.66
TNFRSF1A-201ENST00000162749 KIAA0232Q92628 1395 aa25.42■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms